| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is glgP [H]
Identifier: 119716045
GI number: 119716045
Start: 1929708
End: 1932296
Strand: Direct
Name: glgP [H]
Synonym: Noca_1811
Alternate gene names: 119716045
Gene position: 1929708-1932296 (Clockwise)
Preceding gene: 119716038
Following gene: 119716047
Centisome position: 38.7
GC content: 71.8
Gene sequence:
>2589_bases GTGCGTGCGATCCGTCGATTCACCGTCCGTCCCGTCCTGCCCCCGGCCCTCGCCGGACTGGGCCGTCTCGCCGGCAACCT GCGGTGGTCCTGGGACCCCGAGTCGCAGGACGTCTTCGAGTCCATCGACCCCGTGCTGTGGGAGTCGACGGGACGTGACC CGGTCAAGCTCCTGGGCGCCGTCGGTCGGCGTCGGCTCGAGGAGCTGGCCGCCGACGAGGGCTTCCTCGCCCGGCTCGGT GTGGCCGTCGGCCACCTCGACCAGTACCTGACCGGCGACCGCTGGTACCAGCGCCGGCTCGCTGCCGGCGAGGAGGGGCC GCGGGCGATCGGCTACTTCTCCCCGGAGTTCGGGATCACCGCCGTGCTGCCGCAGTACTCCGGCGGTCTCGGCATCCTCG CCGGGGACCACCTCAAGGCCGCCAGCGACCTCGGCGTCCCGATCGTCGGCGTCGGCCTGCTCTACCGGCACGGCTACTTC AAGCAGGCCCTCTCCCGCGAGGGCTGGCAGCAGGAGACCTACCCGGTCCTCGACCCCGACGGCCTGCCCATCTCGCTGCT GCGCGAGGAGAACGGCGCCCGGGCGATGATCAGTGTCGCGCTGCCCGATGGCCCGGAGCTGCTGGCCCGGATCTGGGTCG CCAGCGTCGGCCGGGTGCCCCTGCTGATGCTGGACACCGACGTCGAGGGCAACCCCGACCACTACCGCGACGTGACCGAC CGCCTGTACGGCGGCAACAGCGAGCACCGGCTGCGCCAGGAGCTGCTGCTCGGCGTCGGCGGCGTGCGCGCGCTGCGCAC CTACTCGCGGCTCTCCGGCCACCCCGCCCCCGAGGTGTTCCACACCAACGAGGGCCACGCCGGCTTCCTCGGGCTGGAGC GGATCCGGGAGCTCACCGTGGCCGAGGGCGGCCCCAAGCTCGACTTCGACACCGCGCTCGAGGTCAGCCGGGCCTCGACC GTGTTCACCACCCACACGCCGGTGCCCGCGGGCATCGACCGGTTCCCGCTCACCCTGATCGAGCAGTACTTCAGCGAGGC CGGCCCGACGCCCGGCGTACCGGTCGAGCGGGTGCTCGCGCTGGGCACCGAGGACTACGAGGGCGGCGACCCGGCGGTCT TCAACATGGCGGTGATGGGGTTCCGCCTCGCGCAGCGCGCGAACGGCGTCTCCCAGCTCCACGGCCACGTCAGCCGGGGG ATGTTCAACGGCCTGTGGCCCGCCTTCGACGAGGCCGAGGTGCCGATCGGGTCGATCACCAACGGCGTGCACGCCCCGAC CTGGGTCGCGCGTGAGGTGATCGAGCTGGCGATCGCCCAGGGCGCTGACCCGGAGTCCGACGACACGAGCGGCTTCTGGG CTGCCGCGGACAAGGTGCCGGGCACCGAGATCTGGGCCGTCAAGCGGGTGCTGCGCGAGCGGCTGGTGGTCGACGCCCGC CGGCGGCTGCGCCGGTCCTGGGAGAAGCGCGGCGCGGCCAAGGCGGAGCTGAGCTGGATCGACAACGCCCTGGACCCCGA CGTGCTGACGATCGGCTTCGCGCGGCGCGCAGCGTCGTACAAGCGGCTCACGCTGATGATGCGCGACCCCGAGCGGCTCA AGTCGCTGCTGCTGCACCCCGAGCGCCCGATCCAGCTCGTGATCGCCGGCAAGGCGCACCCGGCCGATGACGGGGGCAAG AAGCTGATCCAGGACATCGTCAAGCTGTCCGACGACCCGGAGATCCGGCACCGCATCGTGTTCCTGCCGAACTACGACAT CGCGATGGCCAAGCCGCTGTACCCCGGTTGTGACGTCTGGCTCAACAACCCGCTGCGCCCCTACGAGGCCTGCGGCACCT CCGGCATGAAGGCCGCGCTCAACGGCGGCCTGAACCTCTCGGTGCTCGATGGCTGGTGGGACGAGTGGTACGACGGTGAC AACGGCTGGGCGATCCCGACCGCCGACGGCGTCGAGGACCCCGACCACCGCGACGACCTCGAGGCCGCCGCGCTCTACGA CCTGATCGAGAACGACGTGGCGCCCCGCTTCTACGACCTCGACGGCGAGGGCGTCCCGAACCGCTGGCTGGAGATGACCC GGCACACGCTGAAGTCGCTGGGCCCGAAGGTGCTCGCCACCCGGATGGTCCGCGACTACGTGCGCCAGCTCTACACCCCG GCGTGCGTGACCGCGCACCGGCTGAACTCCGACTTCCACGGCGCCGCCGAGCTGGCCGCCTGGAAGAAGAAGGTCAAGAC CGGCTGGTCGGCGGTGCGGGTGGACCACGTCGAGAGCAGCGGCGTCGGCGACGCCCCCGAGGTCGGCGACCAGATGAGCG TGCGGGCCTTCGTCGCCCTCGGCTCGCTGGCTCCCGACGACGTCGAGGTGCAGCTGCTGCACGGCAAGACCAACGGCGAG GACGAGCTGGTCGAGACGCTCGTGGACCGGCTGCACGTGGCCGAGTCCTACGAGGGCGGCCGGCACCGGTTCGACGGCGA CGTCGTCCTGGACCACTCCGGGTCGTTCGGCTACACCGTGCGGATCGTGCCCCGCAACGACGTCCTCACCTCACCCGCGG AGCTCGGCCTGGTGGCCCTGGCGCTGTAG
Upstream 100 bases:
>100_bases CGTTATGTGGACCGGCGGGTCGGTGGTGGGTGACGCGTGCCGCACCGTGGGTTCGCGCGATTCTTTGATCGTTCCAACAT CCACGATGTACCGTCGCCGG
Downstream 100 bases:
>100_bases GGCCCTTAGGCGCCGGTGGTCGAGCTTGTCGAGGTCCCGGAAGTGTCGGCAGGTGCGGGATGCCGCGGCCACGCGCCGAC CGCAACCACACCGTCGGATG
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 862; Mature: 862
Protein sequence:
>862_residues MRAIRRFTVRPVLPPALAGLGRLAGNLRWSWDPESQDVFESIDPVLWESTGRDPVKLLGAVGRRRLEELAADEGFLARLG VAVGHLDQYLTGDRWYQRRLAAGEEGPRAIGYFSPEFGITAVLPQYSGGLGILAGDHLKAASDLGVPIVGVGLLYRHGYF KQALSREGWQQETYPVLDPDGLPISLLREENGARAMISVALPDGPELLARIWVASVGRVPLLMLDTDVEGNPDHYRDVTD RLYGGNSEHRLRQELLLGVGGVRALRTYSRLSGHPAPEVFHTNEGHAGFLGLERIRELTVAEGGPKLDFDTALEVSRAST VFTTHTPVPAGIDRFPLTLIEQYFSEAGPTPGVPVERVLALGTEDYEGGDPAVFNMAVMGFRLAQRANGVSQLHGHVSRG MFNGLWPAFDEAEVPIGSITNGVHAPTWVAREVIELAIAQGADPESDDTSGFWAAADKVPGTEIWAVKRVLRERLVVDAR RRLRRSWEKRGAAKAELSWIDNALDPDVLTIGFARRAASYKRLTLMMRDPERLKSLLLHPERPIQLVIAGKAHPADDGGK KLIQDIVKLSDDPEIRHRIVFLPNYDIAMAKPLYPGCDVWLNNPLRPYEACGTSGMKAALNGGLNLSVLDGWWDEWYDGD NGWAIPTADGVEDPDHRDDLEAAALYDLIENDVAPRFYDLDGEGVPNRWLEMTRHTLKSLGPKVLATRMVRDYVRQLYTP ACVTAHRLNSDFHGAAELAAWKKKVKTGWSAVRVDHVESSGVGDAPEVGDQMSVRAFVALGSLAPDDVEVQLLHGKTNGE DELVETLVDRLHVAESYEGGRHRFDGDVVLDHSGSFGYTVRIVPRNDVLTSPAELGLVALAL
Sequences:
>Translated_862_residues MRAIRRFTVRPVLPPALAGLGRLAGNLRWSWDPESQDVFESIDPVLWESTGRDPVKLLGAVGRRRLEELAADEGFLARLG VAVGHLDQYLTGDRWYQRRLAAGEEGPRAIGYFSPEFGITAVLPQYSGGLGILAGDHLKAASDLGVPIVGVGLLYRHGYF KQALSREGWQQETYPVLDPDGLPISLLREENGARAMISVALPDGPELLARIWVASVGRVPLLMLDTDVEGNPDHYRDVTD RLYGGNSEHRLRQELLLGVGGVRALRTYSRLSGHPAPEVFHTNEGHAGFLGLERIRELTVAEGGPKLDFDTALEVSRAST VFTTHTPVPAGIDRFPLTLIEQYFSEAGPTPGVPVERVLALGTEDYEGGDPAVFNMAVMGFRLAQRANGVSQLHGHVSRG MFNGLWPAFDEAEVPIGSITNGVHAPTWVAREVIELAIAQGADPESDDTSGFWAAADKVPGTEIWAVKRVLRERLVVDAR RRLRRSWEKRGAAKAELSWIDNALDPDVLTIGFARRAASYKRLTLMMRDPERLKSLLLHPERPIQLVIAGKAHPADDGGK KLIQDIVKLSDDPEIRHRIVFLPNYDIAMAKPLYPGCDVWLNNPLRPYEACGTSGMKAALNGGLNLSVLDGWWDEWYDGD NGWAIPTADGVEDPDHRDDLEAAALYDLIENDVAPRFYDLDGEGVPNRWLEMTRHTLKSLGPKVLATRMVRDYVRQLYTP ACVTAHRLNSDFHGAAELAAWKKKVKTGWSAVRVDHVESSGVGDAPEVGDQMSVRAFVALGSLAPDDVEVQLLHGKTNGE DELVETLVDRLHVAESYEGGRHRFDGDVVLDHSGSFGYTVRIVPRNDVLTSPAELGLVALAL >Mature_862_residues MRAIRRFTVRPVLPPALAGLGRLAGNLRWSWDPESQDVFESIDPVLWESTGRDPVKLLGAVGRRRLEELAADEGFLARLG VAVGHLDQYLTGDRWYQRRLAAGEEGPRAIGYFSPEFGITAVLPQYSGGLGILAGDHLKAASDLGVPIVGVGLLYRHGYF KQALSREGWQQETYPVLDPDGLPISLLREENGARAMISVALPDGPELLARIWVASVGRVPLLMLDTDVEGNPDHYRDVTD RLYGGNSEHRLRQELLLGVGGVRALRTYSRLSGHPAPEVFHTNEGHAGFLGLERIRELTVAEGGPKLDFDTALEVSRAST VFTTHTPVPAGIDRFPLTLIEQYFSEAGPTPGVPVERVLALGTEDYEGGDPAVFNMAVMGFRLAQRANGVSQLHGHVSRG MFNGLWPAFDEAEVPIGSITNGVHAPTWVAREVIELAIAQGADPESDDTSGFWAAADKVPGTEIWAVKRVLRERLVVDAR RRLRRSWEKRGAAKAELSWIDNALDPDVLTIGFARRAASYKRLTLMMRDPERLKSLLLHPERPIQLVIAGKAHPADDGGK KLIQDIVKLSDDPEIRHRIVFLPNYDIAMAKPLYPGCDVWLNNPLRPYEACGTSGMKAALNGGLNLSVLDGWWDEWYDGD NGWAIPTADGVEDPDHRDDLEAAALYDLIENDVAPRFYDLDGEGVPNRWLEMTRHTLKSLGPKVLATRMVRDYVRQLYTP ACVTAHRLNSDFHGAAELAAWKKKVKTGWSAVRVDHVESSGVGDAPEVGDQMSVRAFVALGSLAPDDVEVQLLHGKTNGE DELVETLVDRLHVAESYEGGRHRFDGDVVLDHSGSFGYTVRIVPRNDVLTSPAELGLVALAL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 94711; Mature: 94711
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIRRFTVRPVLPPALAGLGRLAGNLRWSWDPESQDVFESIDPVLWESTGRDPVKLLGA CCCHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHCCHHHHCCCCCCHHHHHHH VGRRRLEELAADEGFLARLGVAVGHLDQYLTGDRWYQRRLAAGEEGPRAIGYFSPEFGIT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCE AVLPQYSGGLGILAGDHLKAASDLGVPIVGVGLLYRHGYFKQALSREGWQQETYPVLDPD EECCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GLPISLLREENGARAMISVALPDGPELLARIWVASVGRVPLLMLDTDVEGNPDHYRDVTD CCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH RLYGGNSEHRLRQELLLGVGGVRALRTYSRLSGHPAPEVFHTNEGHAGFLGLERIRELTV HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHH AEGGPKLDFDTALEVSRASTVFTTHTPVPAGIDRFPLTLIEQYFSEAGPTPGVPVERVLA CCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH LGTEDYEGGDPAVFNMAVMGFRLAQRANGVSQLHGHVSRGMFNGLWPAFDEAEVPIGSIT HCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC NGVHAPTWVAREVIELAIAQGADPESDDTSGFWAAADKVPGTEIWAVKRVLRERLVVDAR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH RRLRRSWEKRGAAKAELSWIDNALDPDVLTIGFARRAASYKRLTLMMRDPERLKSLLLHP HHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEHHHHHHCCHHEEEEEECCHHHHHHHHCCC ERPIQLVIAGKAHPADDGGKKLIQDIVKLSDDPEIRHRIVFLPNYDIAMAKPLYPGCDVW CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECCCCCCCCHHC LNNPLRPYEACGTSGMKAALNGGLNLSVLDGWWDEWYDGDNGWAIPTADGVEDPDHRDDL CCCCCCHHHHCCCCCCHHHHCCCCEEEEECCCHHHHCCCCCCEECCCCCCCCCCCCCHHH EAAALYDLIENDVAPRFYDLDGEGVPNRWLEMTRHTLKSLGPKVLATRMVRDYVRQLYTP HHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC ACVTAHRLNSDFHGAAELAAWKKKVKTGWSAVRVDHVESSGVGDAPEVGDQMSVRAFVAL HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH GSLAPDDVEVQLLHGKTNGEDELVETLVDRLHVAESYEGGRHRFDGDVVLDHSGSFGYTV CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEECCCCCCEEE RIVPRNDVLTSPAELGLVALAL EEEECCCCCCCCHHHCEEEEEC >Mature Secondary Structure MRAIRRFTVRPVLPPALAGLGRLAGNLRWSWDPESQDVFESIDPVLWESTGRDPVKLLGA CCCHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHCCHHHHCCCCCCHHHHHHH VGRRRLEELAADEGFLARLGVAVGHLDQYLTGDRWYQRRLAAGEEGPRAIGYFSPEFGIT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCE AVLPQYSGGLGILAGDHLKAASDLGVPIVGVGLLYRHGYFKQALSREGWQQETYPVLDPD EECCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GLPISLLREENGARAMISVALPDGPELLARIWVASVGRVPLLMLDTDVEGNPDHYRDVTD CCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH RLYGGNSEHRLRQELLLGVGGVRALRTYSRLSGHPAPEVFHTNEGHAGFLGLERIRELTV HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHH AEGGPKLDFDTALEVSRASTVFTTHTPVPAGIDRFPLTLIEQYFSEAGPTPGVPVERVLA CCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH LGTEDYEGGDPAVFNMAVMGFRLAQRANGVSQLHGHVSRGMFNGLWPAFDEAEVPIGSIT HCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC NGVHAPTWVAREVIELAIAQGADPESDDTSGFWAAADKVPGTEIWAVKRVLRERLVVDAR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH RRLRRSWEKRGAAKAELSWIDNALDPDVLTIGFARRAASYKRLTLMMRDPERLKSLLLHP HHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEHHHHHHCCHHEEEEEECCHHHHHHHHCCC ERPIQLVIAGKAHPADDGGKKLIQDIVKLSDDPEIRHRIVFLPNYDIAMAKPLYPGCDVW CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECCCCCCCCHHC LNNPLRPYEACGTSGMKAALNGGLNLSVLDGWWDEWYDGDNGWAIPTADGVEDPDHRDDL CCCCCCHHHHCCCCCCHHHHCCCCEEEEECCCHHHHCCCCCCEECCCCCCCCCCCCCHHH EAAALYDLIENDVAPRFYDLDGEGVPNRWLEMTRHTLKSLGPKVLATRMVRDYVRQLYTP HHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC ACVTAHRLNSDFHGAAELAAWKKKVKTGWSAVRVDHVESSGVGDAPEVGDQMSVRAFVAL HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH GSLAPDDVEVQLLHGKTNGEDELVETLVDRLHVAESYEGGRHRFDGDVVLDHSGSFGYTV CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEECCCCCCEEE RIVPRNDVLTSPAELGLVALAL EEEECCCCCCCCHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]