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The map label for this gene is ybbN [C]

Identifier: 119716038

GI number: 119716038

Start: 1916585

End: 1917529

Strand: Direct

Name: ybbN [C]

Synonym: Noca_1804

Alternate gene names: 119716038

Gene position: 1916585-1917529 (Clockwise)

Preceding gene: 119716037

Following gene: 119716045

Centisome position: 38.44

GC content: 73.97

Gene sequence:

>945_bases
ATGACGCAGCAGCCGTTCTCGCGCCCTGGGGCGTTCGACCTCTCCGGCCTCAAGGGCCCGGCGACGCCCGCGCCCGGAGC
ACCCGGCGGAGCACCCGACGGAGCGCCCGTCGGTGGTTCGTCGTACGCCGTGCAGGTGAGCGAGCAGAACTTCCAGTCCA
CCATCGAGGCGTCCACGACGGCACCGGTGCTGCTGGTGTTCTACTCGCCCGGCCGGATGCCCGAGAGCGCCCAGCTCGCC
ACGGACCTCGCGACGCTGTCCAGCGAGTTCGAGGGCCGGTTCCTGGCCGGTCTGGTCGACATCGACGCCGTGCCGGCGAT
CGCCCAGGCGATGCAGATCCCGTCGGTGCCGCTGGTGGTGGCGGTGCTGGACGGCCGCCCGGCGCCGCTCTTCCAGGACG
TGTTGCCGCTCGAGGAGCTGCGCGCCGCGCTGACCCAGGTGATGCAGCAGCTGACCGTCAACGGCGTCGCGGGTCGGCAC
CAGCCGCGGCACGCAGCTGCGGCCGAGGGCGCCGAGGGCGACGAGCCGGCCGTCGACCCGCGCTATGCCGCCGCCCAGGA
GGCGCTCGGCGCGGGCGACATCGGCGCAGCGGTCGCGGAGTACCAGCGCCTCGTCGACGCCAACCCCGCCGATACCGAGG
CGGTCGCCGGCCTCGCGATGGCCACCGTCCTCCAGCGCACCCAGGGCGTCGATCTCAACGCCGCGCGTGCGGCGGCGGCC
GCGGCGCCCGACGACGTCGACGCGCAGACGATGGTCGCCGACCTCGACCTGCTCGGTGGGCACGTCGAGGACGCGTTCAA
CCGGCTGGTGGATCTGGTCCGGCGCACGGCCGGCGACGACCGCGATCGTGCTCGCGAGCACCTGATCGGCCTGTTCGGCG
CGGTCGGCAACGGGGACCCGCGGGTGCTCAAGGCCCGCCAGAACCTGGCTTCCGCCCTGTTCTGA

Upstream 100 bases:

>100_bases
GCGAGGAGGCCGTCGCCCTCGGTCTGGCCTGAGCCCCGGCGCACCTGCCGCCCCGGGCCTCCGGTGAGGCCACGCCCGGC
TCCTCCCTAGGATGGAGCCC

Downstream 100 bases:

>100_bases
GCTGCCCAGCCTGAGCTTGCGAAGGCTGGGAATCGGCAGCTCGATACGCTCGCTGGCGCTCGCTACTCGACCAACATCGG
CGAGGTGGTGCGGTTGGCCG

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTQQPFSRPGAFDLSGLKGPATPAPGAPGGAPDGAPVGGSSYAVQVSEQNFQSTIEASTTAPVLLVFYSPGRMPESAQLA
TDLATLSSEFEGRFLAGLVDIDAVPAIAQAMQIPSVPLVVAVLDGRPAPLFQDVLPLEELRAALTQVMQQLTVNGVAGRH
QPRHAAAAEGAEGDEPAVDPRYAAAQEALGAGDIGAAVAEYQRLVDANPADTEAVAGLAMATVLQRTQGVDLNAARAAAA
AAPDDVDAQTMVADLDLLGGHVEDAFNRLVDLVRRTAGDDRDRAREHLIGLFGAVGNGDPRVLKARQNLASALF

Sequences:

>Translated_314_residues
MTQQPFSRPGAFDLSGLKGPATPAPGAPGGAPDGAPVGGSSYAVQVSEQNFQSTIEASTTAPVLLVFYSPGRMPESAQLA
TDLATLSSEFEGRFLAGLVDIDAVPAIAQAMQIPSVPLVVAVLDGRPAPLFQDVLPLEELRAALTQVMQQLTVNGVAGRH
QPRHAAAAEGAEGDEPAVDPRYAAAQEALGAGDIGAAVAEYQRLVDANPADTEAVAGLAMATVLQRTQGVDLNAARAAAA
AAPDDVDAQTMVADLDLLGGHVEDAFNRLVDLVRRTAGDDRDRAREHLIGLFGAVGNGDPRVLKARQNLASALF
>Mature_313_residues
TQQPFSRPGAFDLSGLKGPATPAPGAPGGAPDGAPVGGSSYAVQVSEQNFQSTIEASTTAPVLLVFYSPGRMPESAQLAT
DLATLSSEFEGRFLAGLVDIDAVPAIAQAMQIPSVPLVVAVLDGRPAPLFQDVLPLEELRAALTQVMQQLTVNGVAGRHQ
PRHAAAAEGAEGDEPAVDPRYAAAQEALGAGDIGAAVAEYQRLVDANPADTEAVAGLAMATVLQRTQGVDLNAARAAAAA
APDDVDAQTMVADLDLLGGHVEDAFNRLVDLVRRTAGDDRDRAREHLIGLFGAVGNGDPRVLKARQNLASALF

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=296, Percent_Identity=27.3648648648649, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 32340; Mature: 32208

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQPFSRPGAFDLSGLKGPATPAPGAPGGAPDGAPVGGSSYAVQVSEQNFQSTIEASTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCC
APVLLVFYSPGRMPESAQLATDLATLSSEFEGRFLAGLVDIDAVPAIAQAMQIPSVPLVV
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
AVLDGRPAPLFQDVLPLEELRAALTQVMQQLTVNGVAGRHQPRHAAAAEGAEGDEPAVDP
EEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCC
RYAAAQEALGAGDIGAAVAEYQRLVDANPADTEAVAGLAMATVLQRTQGVDLNAARAAAA
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AAPDDVDAQTMVADLDLLGGHVEDAFNRLVDLVRRTAGDDRDRAREHLIGLFGAVGNGDP
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH
RVLKARQNLASALF
HHHHHHHHHHHHCC
>Mature Secondary Structure 
TQQPFSRPGAFDLSGLKGPATPAPGAPGGAPDGAPVGGSSYAVQVSEQNFQSTIEASTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCC
APVLLVFYSPGRMPESAQLATDLATLSSEFEGRFLAGLVDIDAVPAIAQAMQIPSVPLVV
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
AVLDGRPAPLFQDVLPLEELRAALTQVMQQLTVNGVAGRHQPRHAAAAEGAEGDEPAVDP
EEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCC
RYAAAQEALGAGDIGAAVAEYQRLVDANPADTEAVAGLAMATVLQRTQGVDLNAARAAAA
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AAPDDVDAQTMVADLDLLGGHVEDAFNRLVDLVRRTAGDDRDRAREHLIGLFGAVGNGDP
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH
RVLKARQNLASALF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]