| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716034
Identifier: 119716034
GI number: 119716034
Start: 1912281
End: 1912793
Strand: Direct
Name: 119716034
Synonym: Noca_1800
Alternate gene names: NA
Gene position: 1912281-1912793 (Clockwise)
Preceding gene: 119716033
Following gene: 119716035
Centisome position: 38.35
GC content: 71.93
Gene sequence:
>513_bases GTGCCGCGCTGGGTGGACCCCGACATCGCCCGGCACCTGCTGCGCGAGGAGGGCGAGGTCATCGTCGACGAGGTCCGGCA CCACTGGTGCGCGTTCGTGCGGCCGATGGCTGAGGTCGCGGTCGCGGTGTGGCTGCTCGCGGTCATGGGTGTGGTGCCGC TGGCCGTCGCGTGGGTGCCGGAGCTGCTCTCGTTCGGGCTCTTCGGGCACGCGGCCTGGTTGGCGTTGCGCGAGCACCGG GACCGGTTCGTGATCACCAACATGCGGGTGTTCCGCGTGCACGGCGTGCTCGGCCAGAGCCTCGCCACGATGCCGCTGAG CCGGATCCTCGACATCACGGTGCGGCGGCCGATGCTCGGGCGACTGCTCGGGTACGGGCACTTCTGCTTCGAGTCCGCCG CCCAGAAGCAGGGCATCCGCGACATCCGCTACGTGTCCCGCCCCTACGCCCGCGACCTCGCCATCCAGCGGGTCGTGCAG CGTGCGGGGCTGCGCGGCGGCCGGGTCAACTGA
Upstream 100 bases:
>100_bases TCGCGCAGTCCGCCCAGACCGCCGGCGGTCACGGCGCGGCACTCACCGGAGACTTCTTCACCGCGCTGATCACGTTCGTG CGAGACCTGGAGTAGCGCGG
Downstream 100 bases:
>100_bases CGCCGAGCCGGGCGCGCCGCTCGGCCTCGGGATCGCCAGGGCGCGGAACCACGACGAGTAGGGTCCGGTCGTGGCCCTTC CCTTCGACCCCATCGACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Flanked Domain; Membrane-Flanked Domain Protein
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPRWVDPDIARHLLREEGEVIVDEVRHHWCAFVRPMAEVAVAVWLLAVMGVVPLAVAWVPELLSFGLFGHAAWLALREHR DRFVITNMRVFRVHGVLGQSLATMPLSRILDITVRRPMLGRLLGYGHFCFESAAQKQGIRDIRYVSRPYARDLAIQRVVQ RAGLRGGRVN
Sequences:
>Translated_170_residues MPRWVDPDIARHLLREEGEVIVDEVRHHWCAFVRPMAEVAVAVWLLAVMGVVPLAVAWVPELLSFGLFGHAAWLALREHR DRFVITNMRVFRVHGVLGQSLATMPLSRILDITVRRPMLGRLLGYGHFCFESAAQKQGIRDIRYVSRPYARDLAIQRVVQ RAGLRGGRVN >Mature_169_residues PRWVDPDIARHLLREEGEVIVDEVRHHWCAFVRPMAEVAVAVWLLAVMGVVPLAVAWVPELLSFGLFGHAAWLALREHRD RFVITNMRVFRVHGVLGQSLATMPLSRILDITVRRPMLGRLLGYGHFCFESAAQKQGIRDIRYVSRPYARDLAIQRVVQR AGLRGGRVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19396; Mature: 19265
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRWVDPDIARHLLREEGEVIVDEVRHHWCAFVRPMAEVAVAVWLLAVMGVVPLAVAWVP CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLSFGLFGHAAWLALREHRDRFVITNMRVFRVHGVLGQSLATMPLSRILDITVRRPMLG HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RLLGYGHFCFESAAQKQGIRDIRYVSRPYARDLAIQRVVQRAGLRGGRVN HHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PRWVDPDIARHLLREEGEVIVDEVRHHWCAFVRPMAEVAVAVWLLAVMGVVPLAVAWVP CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLSFGLFGHAAWLALREHRDRFVITNMRVFRVHGVLGQSLATMPLSRILDITVRRPMLG HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RLLGYGHFCFESAAQKQGIRDIRYVSRPYARDLAIQRVVQRAGLRGGRVN HHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA