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The map label for this gene is yqjC [H]

Identifier: 119716030

GI number: 119716030

Start: 1909229

End: 1909741

Strand: Reverse

Name: yqjC [H]

Synonym: Noca_1796

Alternate gene names: 119716030

Gene position: 1909741-1909229 (Counterclockwise)

Preceding gene: 119716039

Following gene: 119716029

Centisome position: 38.3

GC content: 68.03

Gene sequence:

>513_bases
TTGGTCCCGTGGGACACATGTCACATGGCCTGTCGGGCCGGTTGCACCGCTTGCCACCATGGACCCATGAGTCTCGACGT
ACCGGCACACCTGTTCACCGCGATCGACCACGTGGGCGTGGCCGTCCCCGACCTGGACGCCGCGATCACGTTCTACGAGG
AGGTCTACGGGATGCGCCTGGCGCACCAGGAGACCAACGAGGAACAGGGTGTCCGGGAGGCGATGATGGCCGTCGGCGAC
TCCGGGTCGCACATCCAGCTGCTGGCCCCGCTCGACGAGAACTCGACGATCGCGAAGTTCCTGGACCGCTCCGGTCCGGG
CATCCAGCAGATGGCCTACCGGGTCACCGACGTGGAGGCGGTGGCCGCGATCCTGCGCGAGCGCGGGCTGCGGCTCCTGT
ACGACGAGCCGCGGCGCGGCACGTCCAAATCGCGGGTCAACTTCATCCACCCCAAGGACGCGGGTGGCATCCTGGTCGAG
CTTGTCGAGCCGGCCACCGAGCCCGCAGACTGA

Upstream 100 bases:

>100_bases
CGATGACAGAACCGGACATGGGGAGCCTCCAGGAAGTACGACAGGGGTATCTCTGGCCGACCTTACCCACGGGTCATCGC
AGGGGCGAGAGGCCGAGACT

Downstream 100 bases:

>100_bases
CCCCCGGCGGGGGCGCGCGCCGCGCCCCCACACCCCGTTTTCGCACTGAGGAACACATCACAGGGGGTGTTACCCCCTGT
TACCCGTGGGTAAGGTCCGG

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MVPWDTCHMACRAGCTACHHGPMSLDVPAHLFTAIDHVGVAVPDLDAAITFYEEVYGMRLAHQETNEEQGVREAMMAVGD
SGSHIQLLAPLDENSTIAKFLDRSGPGIQQMAYRVTDVEAVAAILRERGLRLLYDEPRRGTSKSRVNFIHPKDAGGILVE
LVEPATEPAD

Sequences:

>Translated_170_residues
MVPWDTCHMACRAGCTACHHGPMSLDVPAHLFTAIDHVGVAVPDLDAAITFYEEVYGMRLAHQETNEEQGVREAMMAVGD
SGSHIQLLAPLDENSTIAKFLDRSGPGIQQMAYRVTDVEAVAAILRERGLRLLYDEPRRGTSKSRVNFIHPKDAGGILVE
LVEPATEPAD
>Mature_170_residues
MVPWDTCHMACRAGCTACHHGPMSLDVPAHLFTAIDHVGVAVPDLDAAITFYEEVYGMRLAHQETNEEQGVREAMMAVGD
SGSHIQLLAPLDENSTIAKFLDRSGPGIQQMAYRVTDVEAVAAILRERGLRLLYDEPRRGTSKSRVNFIHPKDAGGILVE
LVEPATEPAD

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=128, Percent_Identity=34.375, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17506387, Length=134, Percent_Identity=32.089552238806, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 18550; Mature: 18550

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPWDTCHMACRAGCTACHHGPMSLDVPAHLFTAIDHVGVAVPDLDAAITFYEEVYGMRL
CCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AHQETNEEQGVREAMMAVGDSGSHIQLLAPLDENSTIAKFLDRSGPGIQQMAYRVTDVEA
HHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH
VAAILRERGLRLLYDEPRRGTSKSRVNFIHPKDAGGILVELVEPATEPAD
HHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MVPWDTCHMACRAGCTACHHGPMSLDVPAHLFTAIDHVGVAVPDLDAAITFYEEVYGMRL
CCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AHQETNEEQGVREAMMAVGDSGSHIQLLAPLDENSTIAKFLDRSGPGIQQMAYRVTDVEA
HHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH
VAAILRERGLRLLYDEPRRGTSKSRVNFIHPKDAGGILVELVEPATEPAD
HHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]