Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716013

Identifier: 119716013

GI number: 119716013

Start: 1887550

End: 1889430

Strand: Reverse

Name: 119716013

Synonym: Noca_1778

Alternate gene names: NA

Gene position: 1889430-1887550 (Counterclockwise)

Preceding gene: 119716014

Following gene: 119716012

Centisome position: 37.9

GC content: 70.33

Gene sequence:

>1881_bases
ATGACGCGCCGAGCTGCTGCCCCCCTCCCGGTCTCCCCCCCGGCCCCCATCCCGGCCTGCGTGGCCGTCCTCCTGGTCGC
CGCGGCGACCGTGCTGACGATGCTCGCCGGAGCACCACCCGCCGGCGCCCACGAGGAGCGGCCCGCGCAGTTCCCCGACG
GCACCGGGCACCGGCCGTCGTTCCTCGGCTTCGACAACCCCCGCCAGCGGGTCGTGTGCGGGTCCGACAGCGGCCGGCTG
ATCGCGGCGCTTCCCGAGGGCGCGGTCAAGGACCGCAACGAGCGGCTGCTCGACTCGTGCCGGTACCGGTCCATCCAGGA
CGCGATCGACTCGGTCCGCAAGCGGCAGACCTCCGTGTACGTGCTGCCGGGGACCTACCACGAGGCGAAGTGGGCGCGCG
CGGAGCGCAGCGACTACTGCTCGCACCTGCAGACCTCGTCGACCTCGCCGCTGCCGTTCTCGGAGTACATCGGCAGCCTG
TCCTCGCCCGACCCCGGTGCCGAGCAGGCCGCCGCGGACTCCGGCGAGTCCAACCCGATCGCGTTGTCCTACGCCGACCA
GCGGCGCTGCGCCCACAACCTGAACCTGATCGCGGTCTTCGGTGACCGGACACCGGGCAACGACAGCATCCGCTGCGACA
GCCGGTTCTGCGGCCTCCAGCTGGTCGGCACCGGGCAGACACCGGCCGACGTGGTCGTCGACAACCGGTTCGCCAAGCTC
AACGCGATCCGCGCGGACCGGGCCGGCGGCTTCTACCTGAGCAACATGACCTTCCAGCAGGCCGAGTTCAACGCGATCTA
CGTCCTGGAGACCGACGGCTTCGTCATCGACCGGGTGGTCGCCCGCGGCAACGACGAGTACGGCGTCCTCGCGTTCGCGA
GCGACCACGGCCTGATCGAGGACTCCGAGGCGTACTACAACGGCGACTCCGGCATCTACCCGGGCTCCGGATCCGACCTC
AACGCCGACAACACGGAGTTCGAGGCGACCCGCTACGCGATCGAGATCCGCGGCAACAACAGCCACGACAACACGCTGGG
CTACTCCGGCACGGCCGGCAACTCGATCTGGGCCCACGACAACGACTTCCACGACAACGCCACCGGCATCGCGACCGACT
CGCTGTTCCCCGGACACCCGGGCCTGCCGCAGGACCACGCGCGCTGGAACCGCAACCGGATCTACTCCAACAACTCCAAC
TGGTACACCGAGTTCGTCGACACCGGCGTCTGCGACAAGCCGATGGAGCAGCGCGGCTACATGGACGGCACGGTCTGCCC
GGTGGTGCCGACGCCGGTCGGCACCGGCGTCCTGATCGCGGGCGGCAACTACGACTCGACCGACCACAACTGGATCTACG
ACAACTGGCGCTACGGCACCATGCAGTTCTGGGTGCCCGCCCCCCTGCGCGACGACTACGACCCGTCGCACCTCTACGAC
ACGTCGAACCACAACCACACCTTCGAGAACCAGATGGGCATCGACCCGCAGGGCCACGAGCAGCCGAACGGGATGGACCA
CTGGTGGGACGACCAGGGCGTGGGCAACTGCTGGGAGGACAACCACTACGGCTCGGCCGGCCAGACCGACAACTTCACGG
TTCCGCCGCCCTCCTGCGCCGACGGCGGCTCGGTCTTCCTGCCCGGCGCGACGGTGAAGGACGCCGGCTTCCTCAGCTGC
AGCCAGTACGACCGCAGCGACCCGACCTGGAAGCACCCGCCCGCGTGCGAGTGGTTCGACAGCCCCAGCAAGCCCGCGCG
GGCCGTGGCCGCTCCGGGTCGGCCCGCCTCCGGCACGGTGCTGGTGGCCCCGATCGCGATGACGGCCGGCGCGCTCGCGT
TGGTCCTGGGCCTGCGCCGCCGGTGGTCGCGTGCGGACTAG

Upstream 100 bases:

>100_bases
GCGCTGGCTGCGCTCCTGAGCGGGCGCCGGCGCCACCATGACCGGCGCGTAACCCCGGGAAGCGCGGGGTCGTTGGGGGA
TCCGACGGAAAGGTCCTGCG

Downstream 100 bases:

>100_bases
GGCCGGGCGACGGATCGGTCTGGTCCTCGTCACACTCCTCGGCCTGCTGGCGGCGGGCGGGTTCGCCCTGGCCCGCTCCG
CTCCGTCGTTGAGCGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MTRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPSFLGFDNPRQRVVCGSDSGRL
IAALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVYVLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSL
SSPDPGAEQAAADSGESNPIALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKL
NAIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIEDSEAYYNGDSGIYPGSGSDL
NADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHDNDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSN
WYTEFVDTGVCDKPMEQRGYMDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYD
TSNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCADGGSVFLPGATVKDAGFLSC
SQYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTVLVAPIAMTAGALALVLGLRRRWSRAD

Sequences:

>Translated_626_residues
MTRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPSFLGFDNPRQRVVCGSDSGRL
IAALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVYVLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSL
SSPDPGAEQAAADSGESNPIALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKL
NAIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIEDSEAYYNGDSGIYPGSGSDL
NADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHDNDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSN
WYTEFVDTGVCDKPMEQRGYMDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYD
TSNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCADGGSVFLPGATVKDAGFLSC
SQYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTVLVAPIAMTAGALALVLGLRRRWSRAD
>Mature_625_residues
TRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPSFLGFDNPRQRVVCGSDSGRLI
AALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVYVLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSLS
SPDPGAEQAAADSGESNPIALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKLN
AIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIEDSEAYYNGDSGIYPGSGSDLN
ADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHDNDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSNW
YTEFVDTGVCDKPMEQRGYMDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYDT
SNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCADGGSVFLPGATVKDAGFLSCS
QYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTVLVAPIAMTAGALALVLGLRRRWSRAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68017; Mature: 67886

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
FLGFDNPRQRVVCGSDSGRLIAALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVY
CCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
VLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSLSSPDPGAEQAAADSGESNPI
EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCE
ALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKL
EEEECHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCEEEEECCCCCHHEEECCCHHHH
NAIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIE
EEEEECCCCCEEEECCEEECCCCCEEEEEECCCEEEEHHHHCCCCCEEEEEEECCCCCCC
DSEAYYNGDSGIYPGSGSDLNADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHD
CCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCC
NDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSNWYTEFVDTGVCDKPMEQRGY
CCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEECCCCCCCCCHHHCCC
MDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYD
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCEEECEEEEEECCCCCCCCCHHHEEC
TSNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCA
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGGSVFLPGATVKDAGFLSCSQYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTV
CCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCE
LVAPIAMTAGALALVLGLRRRWSRAD
EEEHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRRAAAPLPVSPPAPIPACVAVLLVAAATVLTMLAGAPPAGAHEERPAQFPDGTGHRPS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
FLGFDNPRQRVVCGSDSGRLIAALPEGAVKDRNERLLDSCRYRSIQDAIDSVRKRQTSVY
CCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
VLPGTYHEAKWARAERSDYCSHLQTSSTSPLPFSEYIGSLSSPDPGAEQAAADSGESNPI
EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCE
ALSYADQRRCAHNLNLIAVFGDRTPGNDSIRCDSRFCGLQLVGTGQTPADVVVDNRFAKL
EEEECHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCEEEEECCCCCHHEEECCCHHHH
NAIRADRAGGFYLSNMTFQQAEFNAIYVLETDGFVIDRVVARGNDEYGVLAFASDHGLIE
EEEEECCCCCEEEECCEEECCCCCEEEEEECCCEEEEHHHHCCCCCEEEEEEECCCCCCC
DSEAYYNGDSGIYPGSGSDLNADNTEFEATRYAIEIRGNNSHDNTLGYSGTAGNSIWAHD
CCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCC
NDFHDNATGIATDSLFPGHPGLPQDHARWNRNRIYSNNSNWYTEFVDTGVCDKPMEQRGY
CCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEECCCCCCCCCHHHCCC
MDGTVCPVVPTPVGTGVLIAGGNYDSTDHNWIYDNWRYGTMQFWVPAPLRDDYDPSHLYD
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCEEECEEEEEECCCCCCCCCHHHEEC
TSNHNHTFENQMGIDPQGHEQPNGMDHWWDDQGVGNCWEDNHYGSAGQTDNFTVPPPSCA
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGGSVFLPGATVKDAGFLSCSQYDRSDPTWKHPPACEWFDSPSKPARAVAAPGRPASGTV
CCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCE
LVAPIAMTAGALALVLGLRRRWSRAD
EEEHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA