| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is bfrB [H]
Identifier: 119716009
GI number: 119716009
Start: 1883445
End: 1883969
Strand: Direct
Name: bfrB [H]
Synonym: Noca_1774
Alternate gene names: 119716009
Gene position: 1883445-1883969 (Clockwise)
Preceding gene: 119716008
Following gene: 119716010
Centisome position: 37.78
GC content: 69.71
Gene sequence:
>525_bases GTGGCCGCACCCCGCTTCGTCGACCAGCTCAACGCCCAGATCGGCAACGAGCTGGCGGCGCACAACCAGTACCTCGCGTG CGCGGTCTACTACGACGCCCTCACGATGCCGCGCATGGCCGCGTTCTTCTACGCCCAGGCCGTCGAGGAGCGCGCGCACG CCGCGATGATGATCCAGTACCTCCTCGACACCGATGCCGAGGTGGTGATCCCGGCCGTCGAGGCGCCGGTGAACGCCTTC GCCGACGTCGTCGCGCCGGTCGCGCTCGCGCTGGAGCAGGAGAGGCGGGTCACCGAGCAGGTCAACGGGCTGCTCCGGAT CGCGCGCGAGGAGGGTGACTTCGCCTCCGAGCAGTTCCTGCAGTGGTTCATCAAGGAGCAGGTCGAGGAGGTCGCGACGA TGAGCGACCTGCTCGCGGTCACCACCCGCAACCGTGACGACATCGAGGACATCGAGGAGTACGTCGCCCGCGAGCAGAGC GGCGCCGAGGTCGACTCGACCGCCCCGCGCCAGGCCGGCGCCTAG
Upstream 100 bases:
>100_bases TCCGGGTGGACGGCACGAAGGTCACCAAGAAGAAGCTCGCGAAGGCTGCCTGAGCGCACCCGCCGCCCGAACACTGATCG CCGACCCCGAGGAGCACCCC
Downstream 100 bases:
>100_bases TCGCACCGGCCGCAGCTGCCGCGGCGGCGACCGGCGTTCGATACGCTGCGGATGCCTGCCGCCCGGCAGTCCAGGTGGAC CGTCGGTCTCGCGGGTGGGT
Product: Ferritin, Dps family protein
Products: NA
Alternate protein names: Non-heme ferritin Ftn [H]
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MAAPRFVDQLNAQIGNELAAHNQYLACAVYYDALTMPRMAAFFYAQAVEERAHAAMMIQYLLDTDAEVVIPAVEAPVNAF ADVVAPVALALEQERRVTEQVNGLLRIAREEGDFASEQFLQWFIKEQVEEVATMSDLLAVTTRNRDDIEDIEEYVAREQS GAEVDSTAPRQAGA
Sequences:
>Translated_174_residues MAAPRFVDQLNAQIGNELAAHNQYLACAVYYDALTMPRMAAFFYAQAVEERAHAAMMIQYLLDTDAEVVIPAVEAPVNAF ADVVAPVALALEQERRVTEQVNGLLRIAREEGDFASEQFLQWFIKEQVEEVATMSDLLAVTTRNRDDIEDIEEYVAREQS GAEVDSTAPRQAGA >Mature_173_residues AAPRFVDQLNAQIGNELAAHNQYLACAVYYDALTMPRMAAFFYAQAVEERAHAAMMIQYLLDTDAEVVIPAVEAPVNAFA DVVAPVALALEQERRVTEQVNGLLRIAREEGDFASEQFLQWFIKEQVEEVATMSDLLAVTTRNRDDIEDIEEYVAREQSG AEVDSTAPRQAGA
Specific function: Iron-storage protein (Potential) [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=130, Percent_Identity=29.2307692307692, Blast_Score=63, Evalue=9e-12, Organism=Drosophila melanogaster, GI24641673, Length=134, Percent_Identity=30.5970149253731, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 19313; Mature: 19182
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPRFVDQLNAQIGNELAAHNQYLACAVYYDALTMPRMAAFFYAQAVEERAHAAMMIQY CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDTDAEVVIPAVEAPVNAFADVVAPVALALEQERRVTEQVNGLLRIAREEGDFASEQFL HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QWFIKEQVEEVATMSDLLAVTTRNRDDIEDIEEYVAREQSGAEVDSTAPRQAGA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AAPRFVDQLNAQIGNELAAHNQYLACAVYYDALTMPRMAAFFYAQAVEERAHAAMMIQY CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDTDAEVVIPAVEAPVNAFADVVAPVALALEQERRVTEQVNGLLRIAREEGDFASEQFL HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QWFIKEQVEEVATMSDLLAVTTRNRDDIEDIEEYVAREQSGAEVDSTAPRQAGA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA