Click here to switch to the map view.

The map label for this gene is 119716003

Identifier: 119716003

GI number: 119716003

Start: 1878028

End: 1878639

Strand: Direct

Name: 119716003

Synonym: Noca_1768

Alternate gene names: NA

Gene position: 1878028-1878639 (Clockwise)

Preceding gene: 119716000

Following gene: 119716004

Centisome position: 37.67

GC content: 76.63

Gene sequence:

>612_bases
GTGGCCGCGCTGGCGCTCTCGCGCGGCTGGCCGGTCTCGGTCGACGCCATCGTCCAGCTCCTGTGGGACGACACCGCGCC
GCCGGGCGTGACCGCCACCCTGCAGGCCTACGTCTCGCAGCTGCGCCGGGTGATCGAGCCGGAGCGGCAGCGTCGCGCTC
CGGCGACCGTGCTGGTCACGGTGGCCCCGGGCTATGCCCTGCGGGTGCCCGACGACACCCGCGATGCGCATCGGTTCGAG
CAAGCCGTCACGGCCGCCCACCGGCGGTGGCAACCGCTGGCCGGCGGCGGGCGGTCGCCGCTGGGTGCGGCGGTGCTGGC
CGAGACAGTCGAGGAGCTCGACGCCGGGCTGGCGCTCTGGCGCGGCACCCCGTACGCCGAGCTGGCGGACGCCTATGCGC
GCACGGCGGCGTACGCCGGCCACTGCTGCTCGGCCGGATCCGGGCTCGCGGTCGGCCCGGTCGACGCGTTCTTGGCGATG
GCTGCCGCCGCGACCGGCGAGCGGGACCTGGCCGCCCGGCACGCCGAGGACGCGCTGGTGCTCGCCGAGGCCTGGGAGAT
CCCGTTGGTCGCCGCGTGGGTCCGCGAGCAGCGCGCGGTCTACGACTACTGA

Upstream 100 bases:

>100_bases
TTCCCTGTGCTGCGGGCGTGGAGGTCCGCGTCCTCGGCCCGGTCGAGGTGAGGCTGGCCGGCCGGCCAGTGGATCTCGGC
ACCCCCAAGCAGCTGCCCTG

Downstream 100 bases:

>100_bases
CCGCGCCGCTCGACCGGGCGACCTGCCGACAGCACCGACCGGACGGTGTCTTCTGGACCGGTCAAGTCGCCGGTTTGGAG
CACCGCCCGCCGATCGGGTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator SARP Family; SARP Family Transcriptional Regulator; Transcriptional Activator Domain-Containing Protein; Regulator; LuxR Family Transcriptional Regulator; Winged Helix Family Transcriptional Regulator; Transcriptional Regulator ATPase Winged Helix Family; Winged Helix Family Transcriptional Regulator ATPase; Regulatory Protein; SARP Family Pathwcific Regulatory Protein; ATPase Winged Helix Family Transcriptional Regulator

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MAALALSRGWPVSVDAIVQLLWDDTAPPGVTATLQAYVSQLRRVIEPERQRRAPATVLVTVAPGYALRVPDDTRDAHRFE
QAVTAAHRRWQPLAGGGRSPLGAAVLAETVEELDAGLALWRGTPYAELADAYARTAAYAGHCCSAGSGLAVGPVDAFLAM
AAAATGERDLAARHAEDALVLAEAWEIPLVAAWVREQRAVYDY

Sequences:

>Translated_203_residues
MAALALSRGWPVSVDAIVQLLWDDTAPPGVTATLQAYVSQLRRVIEPERQRRAPATVLVTVAPGYALRVPDDTRDAHRFE
QAVTAAHRRWQPLAGGGRSPLGAAVLAETVEELDAGLALWRGTPYAELADAYARTAAYAGHCCSAGSGLAVGPVDAFLAM
AAAATGERDLAARHAEDALVLAEAWEIPLVAAWVREQRAVYDY
>Mature_202_residues
AALALSRGWPVSVDAIVQLLWDDTAPPGVTATLQAYVSQLRRVIEPERQRRAPATVLVTVAPGYALRVPDDTRDAHRFEQ
AVTAAHRRWQPLAGGGRSPLGAAVLAETVEELDAGLALWRGTPYAELADAYARTAAYAGHCCSAGSGLAVGPVDAFLAMA
AAATGERDLAARHAEDALVLAEAWEIPLVAAWVREQRAVYDY

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21625; Mature: 21493

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALALSRGWPVSVDAIVQLLWDDTAPPGVTATLQAYVSQLRRVIEPERQRRAPATVLVT
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEE
VAPGYALRVPDDTRDAHRFEQAVTAAHRRWQPLAGGGRSPLGAAVLAETVEELDAGLALW
ECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RGTPYAELADAYARTAAYAGHCCSAGSGLAVGPVDAFLAMAAAATGERDLAARHAEDALV
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHCCCEE
LAEAWEIPLVAAWVREQRAVYDY
EEHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AALALSRGWPVSVDAIVQLLWDDTAPPGVTATLQAYVSQLRRVIEPERQRRAPATVLVT
CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEE
VAPGYALRVPDDTRDAHRFEQAVTAAHRRWQPLAGGGRSPLGAAVLAETVEELDAGLALW
ECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RGTPYAELADAYARTAAYAGHCCSAGSGLAVGPVDAFLAMAAAATGERDLAARHAEDALV
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHCCCEE
LAEAWEIPLVAAWVREQRAVYDY
EEHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA