| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716000
Identifier: 119716000
GI number: 119716000
Start: 1874331
End: 1874780
Strand: Direct
Name: 119716000
Synonym: Noca_1765
Alternate gene names: NA
Gene position: 1874331-1874780 (Clockwise)
Preceding gene: 119715999
Following gene: 119716003
Centisome position: 37.59
GC content: 70.89
Gene sequence:
>450_bases ATGCCGGTATGGCAGTGGCTGCTCGACGCAGCCGGTGTGCTGCTCGGCTTCGTCCTGCTCTACGGCCTCGGCCTGGTCTT CCGCCGCCGCCTGCTCTCCCGGCATGGCGGCACGTTCGAGCTCAGCTACCGCGTCCGGTCCACGAGGACCGGGCGCGGTT GGCTTCTCGGGCTCGGCCGCTACTCGGGTGAGTCGTTGGAGTGGTTCCGCTACTTCTCGCTGTGGCCGCGTCCCAAGCGG GTGCTGCTGCGCTCCCGGCTGGTCTTCACCGGTCGGCGCGCCCCCGAGGGCGCCGAGCAGATGTCGCTCTATCCCGACCA CGTGGTGATCTCCTGCACCACCCCCGACGGCGTGATCGAGCTCGCCATGTCGCCCGCCTCGCTGATGGGCTTCCAGTCCT GGCTGGAGGCGGGACCGCCGGGCACCGACTGGACCCGCGGCCGCACCTGA
Upstream 100 bases:
>100_bases CGGTCGAGCGCGCGTCCTGACCGACCTCGCGTCGGTCGCGCAGTACTGCCCGCTAGGGTGAGCATCCCGGGGATGCACGT GGTCTGACGAAGGGGCTTGG
Downstream 100 bases:
>100_bases GCCACGACTGAGTGCCGAGTCGGCGCAACATGCCCGCGAGAAGGCGCCGAGTCGGGCTCTCCTGTCGTTTGTGTGGGTCA TGTTCGGCCCGGTAGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MPVWQWLLDAAGVLLGFVLLYGLGLVFRRRLLSRHGGTFELSYRVRSTRTGRGWLLGLGRYSGESLEWFRYFSLWPRPKR VLLRSRLVFTGRRAPEGAEQMSLYPDHVVISCTTPDGVIELAMSPASLMGFQSWLEAGPPGTDWTRGRT
Sequences:
>Translated_149_residues MPVWQWLLDAAGVLLGFVLLYGLGLVFRRRLLSRHGGTFELSYRVRSTRTGRGWLLGLGRYSGESLEWFRYFSLWPRPKR VLLRSRLVFTGRRAPEGAEQMSLYPDHVVISCTTPDGVIELAMSPASLMGFQSWLEAGPPGTDWTRGRT >Mature_148_residues PVWQWLLDAAGVLLGFVLLYGLGLVFRRRLLSRHGGTFELSYRVRSTRTGRGWLLGLGRYSGESLEWFRYFSLWPRPKRV LLRSRLVFTGRRAPEGAEQMSLYPDHVVISCTTPDGVIELAMSPASLMGFQSWLEAGPPGTDWTRGRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16932; Mature: 16801
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVWQWLLDAAGVLLGFVLLYGLGLVFRRRLLSRHGGTFELSYRVRSTRTGRGWLLGLGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEECC YSGESLEWFRYFSLWPRPKRVLLRSRLVFTGRRAPEGAEQMSLYPDHVVISCTTPDGVIE CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCEEE LAMSPASLMGFQSWLEAGPPGTDWTRGRT ECCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PVWQWLLDAAGVLLGFVLLYGLGLVFRRRLLSRHGGTFELSYRVRSTRTGRGWLLGLGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEECC YSGESLEWFRYFSLWPRPKRVLLRSRLVFTGRRAPEGAEQMSLYPDHVVISCTTPDGVIE CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCEEE LAMSPASLMGFQSWLEAGPPGTDWTRGRT ECCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA