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The map label for this gene is atpH

Identifier: 119715995

GI number: 119715995

Start: 1868949

End: 1869776

Strand: Direct

Name: atpH

Synonym: Noca_1760

Alternate gene names: 119715995

Gene position: 1868949-1869776 (Clockwise)

Preceding gene: 119715994

Following gene: 119715996

Centisome position: 37.48

GC content: 73.79

Gene sequence:

>828_bases
ATGGTCCAGCAGCTCAGCTCGCTGCGCGGCTCCTCCGCCGAGGCACTCCAGGTGCTCGGTGAGCAGGTCGACGGCGACCG
GTACACCCTCGAGGAGTTCGCGGCGCTCGCCGACGACCTCTTCCGGGCGGCCGCCCTGCTGCGCTCCGAGCCCGCCCTGC
GGCGGGCGGTGACCGACGTGTCGACGCCCGCCGAGGCCAAGTCCTCGCTGGTCCACGGCCTGCTCGACGGCAAGCTCGGT
GCGCCCGCCGTGGACCTGCTCGCCCAGGCCGTCGGCCTGCGATGGGTCGCGGCCCGCGACCTCGCCGACGCGGTCGAGCA
CCTCGGGGTGGTCGCGGCGGTGCGCTCGGCAGGACGTCGGGAGTCCGTGCGGCTCTCCGACGAGCTGTTCGTCGTCGCCC
AGGTCGTCGAGGAGAACGCCGAGCTGCGCATCGCGCTCTCGGACCCGGTGCGCTCGACCGACGACAAGCGCGAGCTGCTG
CGCGGGCTGCTGGCCCAGCGAGCGCTGCCCGCCACCGTCGCGCTGGTCGAGCAGGCCCTCGCCGGATCGTTCCGCTCGTT
CCACGCGGCGGTCAGCGAGTACCAGAAGGTCGCCGCGGCGACCCAGGGCGAGGGGGTCGCGCTGGTGCGCGTCGCCCGTG
AGCTCACCGAGGCGGAGCGGACCCGTCTCGAGCAGGCATTGAGCACCCAGTACGGCCGGCCGGTGCACCTCAACATCGAG
GTGGACCCGAGCCTCCTGGGCGGCATGCGGGTCGAGATCGGCGACGACGTCATCGACGGCACCGTCGTGTCCCGCCTGGA
CGACGCACGACGGAGACTGGCCGGCTGA

Upstream 100 bases:

>100_bases
GCCTCGAGGACGACGACCGCTCGGCGCGTGTCGTCGAGCGGTTCCTCGCCGACCTCGAGACCATCGAGGCCTCGCAGGCC
GCGGGTGGCGGGGAGAGCTG

Downstream 100 bases:

>100_bases
GCCGGTCAGCACCCAGACCACATCACGAGAGCCCAGGAGAGTAGGGACAGACAAATGACGGAGCTTTCGATCCGGCCCGA
CGAGATCCGCGACGCGCTGC

Product: ATP synthase F1 subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MVQQLSSLRGSSAEALQVLGEQVDGDRYTLEEFAALADDLFRAAALLRSEPALRRAVTDVSTPAEAKSSLVHGLLDGKLG
APAVDLLAQAVGLRWVAARDLADAVEHLGVVAAVRSAGRRESVRLSDELFVVAQVVEENAELRIALSDPVRSTDDKRELL
RGLLAQRALPATVALVEQALAGSFRSFHAAVSEYQKVAAATQGEGVALVRVARELTEAERTRLEQALSTQYGRPVHLNIE
VDPSLLGGMRVEIGDDVIDGTVVSRLDDARRRLAG

Sequences:

>Translated_275_residues
MVQQLSSLRGSSAEALQVLGEQVDGDRYTLEEFAALADDLFRAAALLRSEPALRRAVTDVSTPAEAKSSLVHGLLDGKLG
APAVDLLAQAVGLRWVAARDLADAVEHLGVVAAVRSAGRRESVRLSDELFVVAQVVEENAELRIALSDPVRSTDDKRELL
RGLLAQRALPATVALVEQALAGSFRSFHAAVSEYQKVAAATQGEGVALVRVARELTEAERTRLEQALSTQYGRPVHLNIE
VDPSLLGGMRVEIGDDVIDGTVVSRLDDARRRLAG
>Mature_275_residues
MVQQLSSLRGSSAEALQVLGEQVDGDRYTLEEFAALADDLFRAAALLRSEPALRRAVTDVSTPAEAKSSLVHGLLDGKLG
APAVDLLAQAVGLRWVAARDLADAVEHLGVVAAVRSAGRRESVRLSDELFVVAQVVEENAELRIALSDPVRSTDDKRELL
RGLLAQRALPATVALVEQALAGSFRSFHAAVSEYQKVAAATQGEGVALVRVARELTEAERTRLEQALSTQYGRPVHLNIE
VDPSLLGGMRVEIGDDVIDGTVVSRLDDARRRLAG

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_NOCSJ (A1SHI8)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_922960.1
- STRING:   A1SHI8
- GeneID:   4597942
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_1760
- eggNOG:   COG0712
- HOGENOM:   HBG566588
- OMA:   AVEDELF
- BioCyc:   NSP35761:NOCA_1760-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 29444; Mature: 29444

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQQLSSLRGSSAEALQVLGEQVDGDRYTLEEFAALADDLFRAAALLRSEPALRRAVTDV
CCCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
STPAEAKSSLVHGLLDGKLGAPAVDLLAQAVGLRWVAARDLADAVEHLGVVAAVRSAGRR
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ESVRLSDELFVVAQVVEENAELRIALSDPVRSTDDKRELLRGLLAQRALPATVALVEQAL
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
AGSFRSFHAAVSEYQKVAAATQGEGVALVRVARELTEAERTRLEQALSTQYGRPVHLNIE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
VDPSLLGGMRVEIGDDVIDGTVVSRLDDARRRLAG
ECHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVQQLSSLRGSSAEALQVLGEQVDGDRYTLEEFAALADDLFRAAALLRSEPALRRAVTDV
CCCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
STPAEAKSSLVHGLLDGKLGAPAVDLLAQAVGLRWVAARDLADAVEHLGVVAAVRSAGRR
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ESVRLSDELFVVAQVVEENAELRIALSDPVRSTDDKRELLRGLLAQRALPATVALVEQAL
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
AGSFRSFHAAVSEYQKVAAATQGEGVALVRVARELTEAERTRLEQALSTQYGRPVHLNIE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
VDPSLLGGMRVEIGDDVIDGTVVSRLDDARRRLAG
ECHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA