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The map label for this gene is atpF

Identifier: 119715994

GI number: 119715994

Start: 1868380

End: 1868949

Strand: Direct

Name: atpF

Synonym: Noca_1759

Alternate gene names: 119715994

Gene position: 1868380-1868949 (Clockwise)

Preceding gene: 119715993

Following gene: 119715995

Centisome position: 37.47

GC content: 70.7

Gene sequence:

>570_bases
ATGCAAGCACTGCTCGCCGCACCGTTGGCGAAGGCGGAGGAGCTCAACCCGCTCCTCCCGCACGCGATCGAGATCGTCCT
CTCGCTCGTGGTGTTCGGCCTGCTCCTCTTCGCTGTCTGGAAGTTCGTGACGCCGAGGTTCGAGCAGATCTATACCGAGC
GCACCCAGGCGATCGAGGGCGGCCTGGCCGCGGCCGAGACCAAGCAGGCCGAGGCTGACGCCAAGCTGGCCGACCTCGAG
CAGCAGCTCTCCGAGGCGCGGCACGAGGCGGCTCGGATCCGCGAGGAGGCTCGCGAGCAGGGCGCGCAGATCATCGCCGA
GATGCGGGAGCAGGCCCAGGCCGACGCCGCGCGCATCGTCGAGCACGGCAAGACGCAGATCGAGGCGGAGCGCCAGCAGG
CGGTCACCTCGTTGCGGGCCGAGGTCGGCACGCTGGCGACCAGCCTCGCCGGTCGGATCGTCGGTGAGAGCCTCGAGGAC
GACGACCGCTCGGCGCGTGTCGTCGAGCGGTTCCTCGCCGACCTCGAGACCATCGAGGCCTCGCAGGCCGCGGGTGGCGG
GGAGAGCTGA

Upstream 100 bases:

>100_bases
GGGCTTCGCGCTCGCCGAGGCGCTCGCCATCATCGGTATCGCGCTCGCGTTCGTTCTCTGACCGGTCCGACGACCGACGT
AGGACCCGGAAGGACCTGCC

Downstream 100 bases:

>100_bases
TGGTCCAGCAGCTCAGCTCGCTGCGCGGCTCCTCCGCCGAGGCACTCCAGGTGCTCGGTGAGCAGGTCGACGGCGACCGG
TACACCCTCGAGGAGTTCGC

Product: ATP synthase F0, B subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MQALLAAPLAKAEELNPLLPHAIEIVLSLVVFGLLLFAVWKFVTPRFEQIYTERTQAIEGGLAAAETKQAEADAKLADLE
QQLSEARHEAARIREEAREQGAQIIAEMREQAQADAARIVEHGKTQIEAERQQAVTSLRAEVGTLATSLAGRIVGESLED
DDRSARVVERFLADLETIEASQAAGGGES

Sequences:

>Translated_189_residues
MQALLAAPLAKAEELNPLLPHAIEIVLSLVVFGLLLFAVWKFVTPRFEQIYTERTQAIEGGLAAAETKQAEADAKLADLE
QQLSEARHEAARIREEAREQGAQIIAEMREQAQADAARIVEHGKTQIEAERQQAVTSLRAEVGTLATSLAGRIVGESLED
DDRSARVVERFLADLETIEASQAAGGGES
>Mature_189_residues
MQALLAAPLAKAEELNPLLPHAIEIVLSLVVFGLLLFAVWKFVTPRFEQIYTERTQAIEGGLAAAETKQAEADAKLADLE
QQLSEARHEAARIREEAREQGAQIIAEMREQAQADAARIVEHGKTQIEAERQQAVTSLRAEVGTLATSLAGRIVGESLED
DDRSARVVERFLADLETIEASQAAGGGES

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=146, Percent_Identity=31.5068493150685, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_NOCSJ (A1SHI7)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_922959.1
- ProteinModelPortal:   A1SHI7
- SMR:   A1SHI7
- STRING:   A1SHI7
- GeneID:   4597941
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_1759
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   LEKYNAQ
- BioCyc:   NSP35761:NOCA_1759-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 20497; Mature: 20497

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17bc174c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALLAAPLAKAEELNPLLPHAIEIVLSLVVFGLLLFAVWKFVTPRFEQIYTERTQAIEG
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
GLAAAETKQAEADAKLADLEQQLSEARHEAARIREEAREQGAQIIAEMREQAQADAARIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHGKTQIEAERQQAVTSLRAEVGTLATSLAGRIVGESLEDDDRSARVVERFLADLETIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SQAAGGGES
HHCCCCCCH
>Mature Secondary Structure
MQALLAAPLAKAEELNPLLPHAIEIVLSLVVFGLLLFAVWKFVTPRFEQIYTERTQAIEG
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
GLAAAETKQAEADAKLADLEQQLSEARHEAARIREEAREQGAQIIAEMREQAQADAARIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHGKTQIEAERQQAVTSLRAEVGTLATSLAGRIVGESLEDDDRSARVVERFLADLETIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SQAAGGGES
HHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA