| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715973
Identifier: 119715973
GI number: 119715973
Start: 1845732
End: 1846322
Strand: Direct
Name: 119715973
Synonym: Noca_1738
Alternate gene names: NA
Gene position: 1845732-1846322 (Clockwise)
Preceding gene: 119715970
Following gene: 119715974
Centisome position: 37.02
GC content: 74.79
Gene sequence:
>591_bases ATGACCAGACCCCAGCGGCGCTTGTCCGCCGCGATCGTGGTGGCCCTCGTCCTGGCCCTCGGGGTGGGCGCGTGCAGCGG CGGGGACGACGAGCCCGCGGACCAGCCGCAGTCGCAGCCGGCCGGCTCCGCCACCGTCTCGAAGGTCGAGACCGTGGTGA GCTTCGGGCGGGTCACCGGCTCGCTCCCGCGGGTCGAGCGCACCAGGCTCGCAGGCCAGGTCCGCGAGCTCGTGGACGGC TGGACGCGGGCGGCGTACCTCGGCGGTGACTACCCGCGGCGCGACTTCTCCACGTCCTGGCCCGGGTTCACGCCCGGGGC GCGGAAGGAGGCGCATGGCGACCGGGCGCTGATGAGCAACGAGGACATCGGCCAGCGGATCGACGGCGTGCAGGCCCGGC GCAGCCGGGTGCGGATCGACGTCCTCGCCGTCCGGAAGCGGGCGGTCGGGGTCACCGCCCGGGTGCTGCTCGGCTTCCGG ACCAGCGGGAGGCTCGAGCGCGACGTCCGGGTGCAGGGGCGGCTCTACCTGACCCGCACCGACCGCGCCTGGCGGATCTT CGGCTACGACATGACGAAGGGGACCCGGTGA
Upstream 100 bases:
>100_bases CGGGTCATGGTGGGGTCGCGGACACCGCCCTCCACCGACACCCCGGACCGCACCGGACAGAGCACCTGAGACAGCACCCG AGAGAGGGAGTCCCGCAGCC
Downstream 100 bases:
>100_bases TGTCAGCACGCTTCCACAAGCTCGTTCGGCTCGGGACCATCGGGCTGGTCCTGGCGATCGCGGCGCTCGTCGTGCCGGAC TCGGCGGTGAAGAGCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTRPQRRLSAAIVVALVLALGVGACSGGDDEPADQPQSQPAGSATVSKVETVVSFGRVTGSLPRVERTRLAGQVRELVDG WTRAAYLGGDYPRRDFSTSWPGFTPGARKEAHGDRALMSNEDIGQRIDGVQARRSRVRIDVLAVRKRAVGVTARVLLGFR TSGRLERDVRVQGRLYLTRTDRAWRIFGYDMTKGTR
Sequences:
>Translated_196_residues MTRPQRRLSAAIVVALVLALGVGACSGGDDEPADQPQSQPAGSATVSKVETVVSFGRVTGSLPRVERTRLAGQVRELVDG WTRAAYLGGDYPRRDFSTSWPGFTPGARKEAHGDRALMSNEDIGQRIDGVQARRSRVRIDVLAVRKRAVGVTARVLLGFR TSGRLERDVRVQGRLYLTRTDRAWRIFGYDMTKGTR >Mature_195_residues TRPQRRLSAAIVVALVLALGVGACSGGDDEPADQPQSQPAGSATVSKVETVVSFGRVTGSLPRVERTRLAGQVRELVDGW TRAAYLGGDYPRRDFSTSWPGFTPGARKEAHGDRALMSNEDIGQRIDGVQARRSRVRIDVLAVRKRAVGVTARVLLGFRT SGRLERDVRVQGRLYLTRTDRAWRIFGYDMTKGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21525; Mature: 21394
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPQRRLSAAIVVALVLALGVGACSGGDDEPADQPQSQPAGSATVSKVETVVSFGRVTG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC SLPRVERTRLAGQVRELVDGWTRAAYLGGDYPRRDFSTSWPGFTPGARKEAHGDRALMSN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC EDIGQRIDGVQARRSRVRIDVLAVRKRAVGVTARVLLGFRTSGRLERDVRVQGRLYLTRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEC DRAWRIFGYDMTKGTR CCEEEEEEEECCCCCC >Mature Secondary Structure TRPQRRLSAAIVVALVLALGVGACSGGDDEPADQPQSQPAGSATVSKVETVVSFGRVTG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC SLPRVERTRLAGQVRELVDGWTRAAYLGGDYPRRDFSTSWPGFTPGARKEAHGDRALMSN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC EDIGQRIDGVQARRSRVRIDVLAVRKRAVGVTARVLLGFRTSGRLERDVRVQGRLYLTRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEC DRAWRIFGYDMTKGTR CCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA