| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is maeB [C]
Identifier: 119715962
GI number: 119715962
Start: 1835522
End: 1836712
Strand: Direct
Name: maeB [C]
Synonym: Noca_1727
Alternate gene names: 119715962
Gene position: 1835522-1836712 (Clockwise)
Preceding gene: 119715961
Following gene: 119715963
Centisome position: 36.81
GC content: 72.54
Gene sequence:
>1191_bases ATGGCCGAAGCAGAGTCCGCGAGCCCCCATCCGTACGCCGGAGACCCGGTCTTCGACCTCCATGTGGGCGGCAAGATGGC GGTCAGGTCCTCCGTCGCGCTCGACGGGCCGGACGACCTGTCGAAGGCCTACACCCCGGGTGTGGCCCGGGTGTGCGAGG CGATCGCGGAGGACCCGTCGCTGACCCAGCACTACACCTGGGTGCCCAACACCGTCGCGGTCGTCACCGACGGCACCGCC GTCCTCGGGCTCGGTGACATCGGGCCGGCCGCGGCGATGCCCGTCATGGAGGGCAAGGCGGTGCTGTTCAAGCAGTTCGC CGGCGTCGACGCCGTGCCGATCTGCCTGGACACCACCGACGCCGAGGAGATCATCGAGACCGTCGCCCGGCTGGCGCCGA GCTTCGGTGGGATCAACCTCGAGGACATCTCGGCGCCGCGCTGCTTCGAGATCGAGGACCGGCTCAAGGAGCGGCTCGAC ATCCCGGTCTTCCACGACGACCAGCACGGCACGGCCGTCGTCACGCTCGCCGCGCTCACCAACGCCCTCAAGCTGACCGG CCGCAACCCGGAGTCGACCCGGGTGGTGATCTCCGGGGCCGGCGCCGCCGGCGTCGCCGTCGCCAAGATCCTGCTCGAGG CCGGCATCAAGGACCTCGCCGTCACCGACCGCAAGGGCGTCCTCAACTCCGAGCGCGGCGACCTCACCCCGGTGAAGCGC TCGCTCGCGGTGCTGACCGCCGACCGCAGCGGGCGCACCGGAAGCCTGGCCGACGTGCTGGCCGGAGCCGACGTCTACAT CGGCGTGTCCGGCGGGACCGTGCCCGAGGAGTGGGTGGCCGCCATGGCCCCCGACGCGATCATCTTCGGGCTCGCGAACC CGACGCCCGAGGTGCACCCCGAAGTGGCCCACCGGCACGCGCGGGTGGTGGCGACCGGACGCTCGGACTTCCCGAACCAG ATCAACAACGTGCTCGCCTTCCCCGGCATCTTCCGGGGCGCCTTCGACGTCCACGCCACGGCCATCACCGAGGGCATGAA GGTCGCCGCGGCCCAGGCGCTGGCCGACCTGGTCGGCGACGCGCTCGCCGAGGACATGGTCATCCCGTCGCCGTTCGACC CCCGGGTCGGGCCGGCGGTGGCGGCGGCTGTGGCGGACGCCGCACGGCGCGACGGGGTGGCCCGCCGGTAG
Upstream 100 bases:
>100_bases CGCCGGGAGAACCCCGGAGGACGAGGTTCCGCGCACCACCCCTGCGCGTCGAGCCGGACCTCCCCCACACGCCGCCCCAC GGGAGAGTCAGAATCAGGTC
Downstream 100 bases:
>100_bases GGACGGGTAGGTTCGGACAATGTTCGCCGTCTACGCCGACCGGTTCTCCAAGGACGACCCGCTCTCCGCCCTGCAGGTGG GGGAGCGCCCGGATCCAGCG
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAEAESASPHPYAGDPVFDLHVGGKMAVRSSVALDGPDDLSKAYTPGVARVCEAIAEDPSLTQHYTWVPNTVAVVTDGTA VLGLGDIGPAAAMPVMEGKAVLFKQFAGVDAVPICLDTTDAEEIIETVARLAPSFGGINLEDISAPRCFEIEDRLKERLD IPVFHDDQHGTAVVTLAALTNALKLTGRNPESTRVVISGAGAAGVAVAKILLEAGIKDLAVTDRKGVLNSERGDLTPVKR SLAVLTADRSGRTGSLADVLAGADVYIGVSGGTVPEEWVAAMAPDAIIFGLANPTPEVHPEVAHRHARVVATGRSDFPNQ INNVLAFPGIFRGAFDVHATAITEGMKVAAAQALADLVGDALAEDMVIPSPFDPRVGPAVAAAVADAARRDGVARR
Sequences:
>Translated_396_residues MAEAESASPHPYAGDPVFDLHVGGKMAVRSSVALDGPDDLSKAYTPGVARVCEAIAEDPSLTQHYTWVPNTVAVVTDGTA VLGLGDIGPAAAMPVMEGKAVLFKQFAGVDAVPICLDTTDAEEIIETVARLAPSFGGINLEDISAPRCFEIEDRLKERLD IPVFHDDQHGTAVVTLAALTNALKLTGRNPESTRVVISGAGAAGVAVAKILLEAGIKDLAVTDRKGVLNSERGDLTPVKR SLAVLTADRSGRTGSLADVLAGADVYIGVSGGTVPEEWVAAMAPDAIIFGLANPTPEVHPEVAHRHARVVATGRSDFPNQ INNVLAFPGIFRGAFDVHATAITEGMKVAAAQALADLVGDALAEDMVIPSPFDPRVGPAVAAAVADAARRDGVARR >Mature_395_residues AEAESASPHPYAGDPVFDLHVGGKMAVRSSVALDGPDDLSKAYTPGVARVCEAIAEDPSLTQHYTWVPNTVAVVTDGTAV LGLGDIGPAAAMPVMEGKAVLFKQFAGVDAVPICLDTTDAEEIIETVARLAPSFGGINLEDISAPRCFEIEDRLKERLDI PVFHDDQHGTAVVTLAALTNALKLTGRNPESTRVVISGAGAAGVAVAKILLEAGIKDLAVTDRKGVLNSERGDLTPVKRS LAVLTADRSGRTGSLADVLAGADVYIGVSGGTVPEEWVAAMAPDAIIFGLANPTPEVHPEVAHRHARVVATGRSDFPNQI NNVLAFPGIFRGAFDVHATAITEGMKVAAAQALADLVGDALAEDMVIPSPFDPRVGPAVAAAVADAARRDGVARR
Specific function: In addition to the NAD-dependent oxidative decarboxylation of L-malate, the enzyme catalyzes the decarboxylation of oxaloacetate [H]
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=359, Percent_Identity=25.0696378830084, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI62420882, Length=396, Percent_Identity=25.2525252525253, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI62420880, Length=396, Percent_Identity=25.2525252525253, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI239049447, Length=396, Percent_Identity=25.2525252525253, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1788806, Length=403, Percent_Identity=47.8908188585608, Blast_Score=334, Evalue=6e-93, Organism=Escherichia coli, GI87081919, Length=437, Percent_Identity=29.0617848970252, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17537199, Length=404, Percent_Identity=25.2475247524752, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322823, Length=350, Percent_Identity=31.4285714285714, Blast_Score=102, Evalue=1e-22, Organism=Drosophila melanogaster, GI78707232, Length=337, Percent_Identity=28.486646884273, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI281363503, Length=337, Percent_Identity=28.486646884273, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI281363505, Length=337, Percent_Identity=28.486646884273, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI78707236, Length=337, Percent_Identity=28.486646884273, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24646388, Length=392, Percent_Identity=28.3163265306122, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24646386, Length=392, Percent_Identity=28.3163265306122, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 41018; Mature: 40887
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAESASPHPYAGDPVFDLHVGGKMAVRSSVALDGPDDLSKAYTPGVARVCEAIAEDPS CCCCCCCCCCCCCCCCEEEEECCCCEEECCCEECCCCHHHHHHCCCHHHHHHHHHHCCCC LTQHYTWVPNTVAVVTDGTAVLGLGDIGPAAAMPVMEGKAVLFKQFAGVDAVPICLDTTD CCCEEEECCCEEEEEECCEEEEEECCCCCHHCCCHHCCHHHHHHHHCCCCCEEEEECCCC AEEIIETVARLAPSFGGINLEDISAPRCFEIEDRLKERLDIPVFHDDQHGTAVVTLAALT HHHHHHHHHHHCCCCCCCCHHHCCCCCEECHHHHHHHHCCCCEEECCCCCCCEEEHHHHH NALKLTGRNPESTRVVISGAGAAGVAVAKILLEAGIKDLAVTDRKGVLNSERGDLTPVKR HHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCHHHH SLAVLTADRSGRTGSLADVLAGADVYIGVSGGTVPEEWVAAMAPDAIIFGLANPTPEVHP HEEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCH EVAHRHARVVATGRSDFPNQINNVLAFPGIFRGAFDVHATAITEGMKVAAAQALADLVGD HHHHCCEEEEEECCCCCHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAEDMVIPSPFDPRVGPAVAAAVADAARRDGVARR HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AEAESASPHPYAGDPVFDLHVGGKMAVRSSVALDGPDDLSKAYTPGVARVCEAIAEDPS CCCCCCCCCCCCCCCEEEEECCCCEEECCCEECCCCHHHHHHCCCHHHHHHHHHHCCCC LTQHYTWVPNTVAVVTDGTAVLGLGDIGPAAAMPVMEGKAVLFKQFAGVDAVPICLDTTD CCCEEEECCCEEEEEECCEEEEEECCCCCHHCCCHHCCHHHHHHHHCCCCCEEEEECCCC AEEIIETVARLAPSFGGINLEDISAPRCFEIEDRLKERLDIPVFHDDQHGTAVVTLAALT HHHHHHHHHHHCCCCCCCCHHHCCCCCEECHHHHHHHHCCCCEEECCCCCCCEEEHHHHH NALKLTGRNPESTRVVISGAGAAGVAVAKILLEAGIKDLAVTDRKGVLNSERGDLTPVKR HHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCHHHH SLAVLTADRSGRTGSLADVLAGADVYIGVSGGTVPEEWVAAMAPDAIIFGLANPTPEVHP HEEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCH EVAHRHARVVATGRSDFPNQINNVLAFPGIFRGAFDVHATAITEGMKVAAAQALADLVGD HHHHCCEEEEEECCCCCHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAEDMVIPSPFDPRVGPAVAAAVADAARRDGVARR HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2644282 [H]