| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715953
Identifier: 119715953
GI number: 119715953
Start: 1821358
End: 1824096
Strand: Reverse
Name: 119715953
Synonym: Noca_1718
Alternate gene names: NA
Gene position: 1824096-1821358 (Counterclockwise)
Preceding gene: 119715954
Following gene: 119715952
Centisome position: 36.59
GC content: 69.0
Gene sequence:
>2739_bases ATGTGGGTGATGGTGTGGCGGCGACTGTGGCGGGGTGGCTCTCGGACGCTGGTGCTGGGCTTTGCGATCTTGGTGGCGGC GACCGGATTCACGGTGCTGACCGGGGCGTCGAACGCGGAGCGCCTGGACACCGTGGGTACGGTCGCAGAAGCGTCGCAGA AGACCTATGACGTCCTGGTCCGCCCACCGGGGACGCGGTCGGACCTTGAGGAGCAGGAGGGGCTCATCGAGCCCGGTTTC CTCACCGGCATCTATGGCGGCATCACGTTGCGGCAGTGGCACGAGATCCAAGACGTCCCCGGCGTGGAGGTTGCGGCACC GATCGCGATGCTGGGCTACGCCTATCCCGCGCTCCAGATTCCGGTGGACGCGACAGCGGCCTGGTCGCCGCGAGGTACCT CGGTCGCGCGGGTGGATGTTACCTGGGCGGGTGACAATGGCCTGACGGTCACCCGGGAGAGCCCTCAGTTCACAGTGATC ACCGACCATGCGCTGCGTCCGAACACAGGCGCGGGTTTGGGGGAAGGGCCGTGGCTGTTCAAGGACGGCACCGGCAAGTC TCGCGCGATCTGTCCGGTCGAACCTTCCGACGAGGTGTCGCCAGAGAAGAGGCCGGCGAACTTGCTGTGCTTCTCTCGCA CGAAGGGCGGCATGGGTCACGGTCACGTCGGTGAGGAGTTCGCACGAGACGGTGTCCGCGGGGCGATGGTGGACTTCCCG TTCTCCTATGTGATCGCGGCGGTTGACCCGGCCAGTGAGGACGCGTTGGTGGGTCTCGACGGCGCGGTGACCTCCGGCGA TCCACTGACCGGGGCCTCGGTCAAGTACCCGGACTCGGTGGATGGCAAGGGCGTGCCCGTGCTGGTCTCGGACGAGCCCG GGGTCGACGAGACGGCGACTATCACGCTGTCAGGCCTTCCGGATTCCGCCGGCCGGGCCGTGCTGGCAGGAGCCGGCACC GGGGATCTGGTGAAGCTGCCAGCCAGCCTGGTCACCACACAAGTAGTCGACGCCGCGGCCGCCCAGGCACAGCTCATGGA GGCATTCCGCACGACGAAGCCGATCGACGGCCAACGCCGTCCGACCCGTTTCCTCCCCGGTGAGATCACCCAGCTCGGAC AGGTGGGGATGCCGCGCCTGGCGGTGACCTCGGAGCGTCTCGAGGTCGAACTGCGGAAGCAGCCGCCAGGGTTCGACCTC GCCGCTCGGGCACCAGCAAGCGGAGAACCGGCCGCGAGAGAGGTAACCAACTCGGCCAAGGAGCCCGCGGTCGCCGGCAC ACCGGCCTCCCCCGCAACCCTGCGACTGCAGGGGACCTTCGATCCCGCCGAGCTCAGCCATATCACGGATCTGACCGACG AGGTCCTCGCCGGATACTCGGCAGCGCCGACCGAGGGAGCGGACCGGGCCAGTACGAACGCCCTCGGCAACCGGCCGTTG GCACCCTCGACCGACCTGGGTGGACTGGTCCAACCGCCGCCGACGATGGTCACCACTCTCGAGGCCATCCCGCAGTTGAC CCGCGGCTGGAGCGGGGCGGCGGCCTCCGCGCCTATCTCCGCGGTCCGCGTCCGGGTGGCCGATGCAAGCGTCGCGGATG AGGTCTCCCGGGAGCGGATCAGGATCGTCGCCCAGCGCATCAAGGATGCGACCGGCCTCGACGTCGACATCACAACGGGC TCCTCTGCAGGTGCTCAGGGCCTGCTCTTGCCCGCAGGTGACCACGGTCGGCCGCAACTGGCGCTCCAGCAGTGGTGGGT GACCAAGGGGGTCGCAACGAGGATCCTCACCGCAGTCGACAAGAAGTCGCTCGCCCTGTTCGCGCTGGTGCTGCTCGTCT CAGCCTTGTCGATAGCAAACGCCGCGGTCGCGGCTGTCCGGGCCCGTCGTACCGAGCTCGGCGTCCTAGCGAGCCTGGGC TGGAGCAAGGCGCAACTCTTCCGAGCGGTCGGCTACGAGCTCCTCGTCGTGGCGTGCGTCGCCGGCCTGGCCAGCGCCGT GCTCTCCTGGGTGCTCGGTCGTGCTCTTGGGTCCGCCGTGGATCTGCCACGGGCGGCGCTCGCGCTCCCGATCGCCATCG GCGTCGCCGTTGTCGCGGGTGCCGTGCCCGCCACTGTGGCCGCCCGGGCCGATCCGATCGAGGCGGTGCGGCCCGCCGTG AGCGAGGCACGCCGTCCGCACCATGCCGCTCGCGTCATCGGGCTCGCCTGGCTCAATCTCGGGCTGTCACGGACCAGGAG CGCCCTGGCCGGGATCGGTCTGATGATCGCGGTCGCCACCGCCACGCTCCTGGCCGCGATCGTTCTCGGTTTCCAGGGTG CGATCGTGGGGACTGTCCTCGGCGAGACCGTCTCCATCCAGACCCGGACCGTCGACATCGTCGCCACGATCGCGACATTG CTCCTCGGTTGCCTCGGCGTGGCGAACGTGATGTACCTCAATATCCGAGACCGCGGGACCGAGCTGGCCACGCTGCGGGG GATCGGATGGGCCGAAGGTCAGCTCAGGTACCTGATCACCGCGGAGGGGGCCATGCTCGGTGTCCTCGGTGCCACCCTGG GCGGGCTGATCGGCCTGGGGGTCACGGCCGTGGTCGCCGGAGACCTCACCTCGATCGTGATCGGATGGGCTGTTGCGGTC TGGGCCGTCTCCAGCCTCCTTGCCGCGCTGTCGGCCTTGGCCGCCACCGCAATGGTCACTCACATCCCGACCGCCGAGCT GTTGACGGAGGACGCATGA
Upstream 100 bases:
>100_bases TTTGGGTCCTGGGGGATGCTGAGAGCAGCCTCGACTCCAGAAACCTTGGGCCGATACCGATCAGGTCGATTCGTGGCGTC GTTCTTCAGGGTGGTCGCCA
Downstream 100 bases:
>100_bases GGAACACCAACCCAGACGATCGCGACGATCTCGAGGCGGTTGCGGTCGTCGAGCACCGCGATGACGTCGCGATCAGCGTG CGCGGCGTACGCAAGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 912; Mature: 912
Protein sequence:
>912_residues MWVMVWRRLWRGGSRTLVLGFAILVAATGFTVLTGASNAERLDTVGTVAEASQKTYDVLVRPPGTRSDLEEQEGLIEPGF LTGIYGGITLRQWHEIQDVPGVEVAAPIAMLGYAYPALQIPVDATAAWSPRGTSVARVDVTWAGDNGLTVTRESPQFTVI TDHALRPNTGAGLGEGPWLFKDGTGKSRAICPVEPSDEVSPEKRPANLLCFSRTKGGMGHGHVGEEFARDGVRGAMVDFP FSYVIAAVDPASEDALVGLDGAVTSGDPLTGASVKYPDSVDGKGVPVLVSDEPGVDETATITLSGLPDSAGRAVLAGAGT GDLVKLPASLVTTQVVDAAAAQAQLMEAFRTTKPIDGQRRPTRFLPGEITQLGQVGMPRLAVTSERLEVELRKQPPGFDL AARAPASGEPAAREVTNSAKEPAVAGTPASPATLRLQGTFDPAELSHITDLTDEVLAGYSAAPTEGADRASTNALGNRPL APSTDLGGLVQPPPTMVTTLEAIPQLTRGWSGAAASAPISAVRVRVADASVADEVSRERIRIVAQRIKDATGLDVDITTG SSAGAQGLLLPAGDHGRPQLALQQWWVTKGVATRILTAVDKKSLALFALVLLVSALSIANAAVAAVRARRTELGVLASLG WSKAQLFRAVGYELLVVACVAGLASAVLSWVLGRALGSAVDLPRAALALPIAIGVAVVAGAVPATVAARADPIEAVRPAV SEARRPHHAARVIGLAWLNLGLSRTRSALAGIGLMIAVATATLLAAIVLGFQGAIVGTVLGETVSIQTRTVDIVATIATL LLGCLGVANVMYLNIRDRGTELATLRGIGWAEGQLRYLITAEGAMLGVLGATLGGLIGLGVTAVVAGDLTSIVIGWAVAV WAVSSLLAALSALAATAMVTHIPTAELLTEDA
Sequences:
>Translated_912_residues MWVMVWRRLWRGGSRTLVLGFAILVAATGFTVLTGASNAERLDTVGTVAEASQKTYDVLVRPPGTRSDLEEQEGLIEPGF LTGIYGGITLRQWHEIQDVPGVEVAAPIAMLGYAYPALQIPVDATAAWSPRGTSVARVDVTWAGDNGLTVTRESPQFTVI TDHALRPNTGAGLGEGPWLFKDGTGKSRAICPVEPSDEVSPEKRPANLLCFSRTKGGMGHGHVGEEFARDGVRGAMVDFP FSYVIAAVDPASEDALVGLDGAVTSGDPLTGASVKYPDSVDGKGVPVLVSDEPGVDETATITLSGLPDSAGRAVLAGAGT GDLVKLPASLVTTQVVDAAAAQAQLMEAFRTTKPIDGQRRPTRFLPGEITQLGQVGMPRLAVTSERLEVELRKQPPGFDL AARAPASGEPAAREVTNSAKEPAVAGTPASPATLRLQGTFDPAELSHITDLTDEVLAGYSAAPTEGADRASTNALGNRPL APSTDLGGLVQPPPTMVTTLEAIPQLTRGWSGAAASAPISAVRVRVADASVADEVSRERIRIVAQRIKDATGLDVDITTG SSAGAQGLLLPAGDHGRPQLALQQWWVTKGVATRILTAVDKKSLALFALVLLVSALSIANAAVAAVRARRTELGVLASLG WSKAQLFRAVGYELLVVACVAGLASAVLSWVLGRALGSAVDLPRAALALPIAIGVAVVAGAVPATVAARADPIEAVRPAV SEARRPHHAARVIGLAWLNLGLSRTRSALAGIGLMIAVATATLLAAIVLGFQGAIVGTVLGETVSIQTRTVDIVATIATL LLGCLGVANVMYLNIRDRGTELATLRGIGWAEGQLRYLITAEGAMLGVLGATLGGLIGLGVTAVVAGDLTSIVIGWAVAV WAVSSLLAALSALAATAMVTHIPTAELLTEDA >Mature_912_residues MWVMVWRRLWRGGSRTLVLGFAILVAATGFTVLTGASNAERLDTVGTVAEASQKTYDVLVRPPGTRSDLEEQEGLIEPGF LTGIYGGITLRQWHEIQDVPGVEVAAPIAMLGYAYPALQIPVDATAAWSPRGTSVARVDVTWAGDNGLTVTRESPQFTVI TDHALRPNTGAGLGEGPWLFKDGTGKSRAICPVEPSDEVSPEKRPANLLCFSRTKGGMGHGHVGEEFARDGVRGAMVDFP FSYVIAAVDPASEDALVGLDGAVTSGDPLTGASVKYPDSVDGKGVPVLVSDEPGVDETATITLSGLPDSAGRAVLAGAGT GDLVKLPASLVTTQVVDAAAAQAQLMEAFRTTKPIDGQRRPTRFLPGEITQLGQVGMPRLAVTSERLEVELRKQPPGFDL AARAPASGEPAAREVTNSAKEPAVAGTPASPATLRLQGTFDPAELSHITDLTDEVLAGYSAAPTEGADRASTNALGNRPL APSTDLGGLVQPPPTMVTTLEAIPQLTRGWSGAAASAPISAVRVRVADASVADEVSRERIRIVAQRIKDATGLDVDITTG SSAGAQGLLLPAGDHGRPQLALQQWWVTKGVATRILTAVDKKSLALFALVLLVSALSIANAAVAAVRARRTELGVLASLG WSKAQLFRAVGYELLVVACVAGLASAVLSWVLGRALGSAVDLPRAALALPIAIGVAVVAGAVPATVAARADPIEAVRPAV SEARRPHHAARVIGLAWLNLGLSRTRSALAGIGLMIAVATATLLAAIVLGFQGAIVGTVLGETVSIQTRTVDIVATIATL LLGCLGVANVMYLNIRDRGTELATLRGIGWAEGQLRYLITAEGAMLGVLGATLGGLIGLGVTAVVAGDLTSIVIGWAVAV WAVSSLLAALSALAATAMVTHIPTAELLTEDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93988; Mature: 93988
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVMVWRRLWRGGSRTLVLGFAILVAATGFTVLTGASNAERLDTVGTVAEASQKTYDVLV CHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEE RPPGTRSDLEEQEGLIEPGFLTGIYGGITLRQWHEIQDVPGVEVAAPIAMLGYAYPALQI CCCCCCCCHHHHCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEC PVDATAAWSPRGTSVARVDVTWAGDNGLTVTRESPQFTVITDHALRPNTGAGLGEGPWLF CCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEE KDGTGKSRAICPVEPSDEVSPEKRPANLLCFSRTKGGMGHGHVGEEFARDGVRGAMVDFP ECCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCEEECCC FSYVIAAVDPASEDALVGLDGAVTSGDPLTGASVKYPDSVDGKGVPVLVSDEPGVDETAT HHHEEEEECCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCEEE ITLSGLPDSAGRAVLAGAGTGDLVKLPASLVTTQVVDAAAAQAQLMEAFRTTKPIDGQRR EEEECCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PTRFLPGEITQLGQVGMPRLAVTSERLEVELRKQPPGFDLAARAPASGEPAAREVTNSAK CCCCCCHHHHHHHHCCCCCEEEEHHHHEEEEECCCCCCCCEECCCCCCCCHHHHHHCCCC EPAVAGTPASPATLRLQGTFDPAELSHITDLTDEVLAGYSAAPTEGADRASTNALGNRPL CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC APSTDLGGLVQPPPTMVTTLEAIPQLTRGWSGAAASAPISAVRVRVADASVADEVSRERI CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHHH RIVAQRIKDATGLDVDITTGSSAGAQGLLLPAGDHGRPQLALQQWWVTKGVATRILTAVD HHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH KKSLALFALVLLVSALSIANAAVAAVRARRTELGVLASLGWSKAQLFRAVGYELLVVACV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AGLASAVLSWVLGRALGSAVDLPRAALALPIAIGVAVVAGAVPATVAARADPIEAVRPAV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHH SEARRPHHAARVIGLAWLNLGLSRTRSALAGIGLMIAVATATLLAAIVLGFQGAIVGTVL HHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH GETVSIQTRTVDIVATIATLLLGCLGVANVMYLNIRDRGTELATLRGIGWAEGQLRYLIT CCEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCCCCCCEEEEEE AEGAMLGVLGATLGGLIGLGVTAVVAGDLTSIVIGWAVAVWAVSSLLAALSALAATAMVT ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIPTAELLTEDA HCCCHHHHCCCC >Mature Secondary Structure MWVMVWRRLWRGGSRTLVLGFAILVAATGFTVLTGASNAERLDTVGTVAEASQKTYDVLV CHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEE RPPGTRSDLEEQEGLIEPGFLTGIYGGITLRQWHEIQDVPGVEVAAPIAMLGYAYPALQI CCCCCCCCHHHHCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEC PVDATAAWSPRGTSVARVDVTWAGDNGLTVTRESPQFTVITDHALRPNTGAGLGEGPWLF CCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEE KDGTGKSRAICPVEPSDEVSPEKRPANLLCFSRTKGGMGHGHVGEEFARDGVRGAMVDFP ECCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCEEECCC FSYVIAAVDPASEDALVGLDGAVTSGDPLTGASVKYPDSVDGKGVPVLVSDEPGVDETAT HHHEEEEECCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCEEE ITLSGLPDSAGRAVLAGAGTGDLVKLPASLVTTQVVDAAAAQAQLMEAFRTTKPIDGQRR EEEECCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PTRFLPGEITQLGQVGMPRLAVTSERLEVELRKQPPGFDLAARAPASGEPAAREVTNSAK CCCCCCHHHHHHHHCCCCCEEEEHHHHEEEEECCCCCCCCEECCCCCCCCHHHHHHCCCC EPAVAGTPASPATLRLQGTFDPAELSHITDLTDEVLAGYSAAPTEGADRASTNALGNRPL CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC APSTDLGGLVQPPPTMVTTLEAIPQLTRGWSGAAASAPISAVRVRVADASVADEVSRERI CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHHH RIVAQRIKDATGLDVDITTGSSAGAQGLLLPAGDHGRPQLALQQWWVTKGVATRILTAVD HHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH KKSLALFALVLLVSALSIANAAVAAVRARRTELGVLASLGWSKAQLFRAVGYELLVVACV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AGLASAVLSWVLGRALGSAVDLPRAALALPIAIGVAVVAGAVPATVAARADPIEAVRPAV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHH SEARRPHHAARVIGLAWLNLGLSRTRSALAGIGLMIAVATATLLAAIVLGFQGAIVGTVL HHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH GETVSIQTRTVDIVATIATLLLGCLGVANVMYLNIRDRGTELATLRGIGWAEGQLRYLIT CCEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCCCCCCEEEEEE AEGAMLGVLGATLGGLIGLGVTAVVAGDLTSIVIGWAVAVWAVSSLLAALSALAATAMVT ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIPTAELLTEDA HCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA