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The map label for this gene is yoqW [H]

Identifier: 119715939

GI number: 119715939

Start: 1810181

End: 1810942

Strand: Direct

Name: yoqW [H]

Synonym: Noca_1704

Alternate gene names: 119715939

Gene position: 1810181-1810942 (Clockwise)

Preceding gene: 119715938

Following gene: 119715940

Centisome position: 36.31

GC content: 70.87

Gene sequence:

>762_bases
ATGTGCGGTCGCTACGCCTCGAGCCGTCGGCCCGAGGATCTGGTCGAGGAGTTCGACATCGCCGACGTCCGGATCCCGGC
GCCGCTCGCGGCCGACTACAACGTGGCGCCGACCAAGGAGGTCTACGCCGTCGTGGAGCGACCCCCCTCGAGCGAGAGCC
CGGAACCGCCGCAGCGCCAGCTGCGGGTGCTGACCTGGGGCCTGGTGCCCTCCTGGGCGAAGGATCCCTCCATCGGCAAC
CGGATGATCAACGCCCGGATGGAGACCGTCGCGGAGAAGCCGGCGTACAAGCGGGCGTTCGCGAAGCGCCGCTGCCTGCT
GCCCGCCGACGGCTACTACGAGTGGTATCCCACCGAGGAGCAGACCAAGGCCGGCAAGCCGCGCAAGCAGCCCTTCTTCA
TCCGCCCGAAGGACCACGGAGTGCTCGCGATGGCCGGCCTGTACGAGATCTGGCGCGACCCGACGAAGGGCGACGAGGAT
CCCGACCGGTTCCGGTGGACCTGCACGGTCATCACCACCGAGGCGGAGGACGCCCTCGGGCACATCCACGACCGGATGCC
GCTGATGGTCGGGCGTGAGCGCTGGGCCGACTGGCTGGACCCGACCGCGCCGCAGGACCACCTGCTCGAGCTCCTGGTGC
CGGCGGCGCCGGGGACGCTCGAGGCGTATCCCGTCGCCGCCCTGGTCAGCAACGTCCGCAACAACGGACCGGAGCTGGTC
GAGCCGCTGCCGCTGGCGCCGGACGGCAAGGTCGTCTCGTGA

Upstream 100 bases:

>100_bases
CGAAACTTCGGCCGAACGGTTCCGGTTTTGGCCGAGAAGTCCAGCTTCCTCGCGCATCCGGGGTCGGGGGACCGGCCTCG
GGTACCACTAGCCTGACGGT

Downstream 100 bases:

>100_bases
GCACCGCAGAGCGCCGCGTCGACACCCCGCACGGCGAGGCGCGCCTGGTGGTCGACCAGGCGCGCGCTCCGGTCGCCACC
GTCCTGCTCTCGCACGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MCGRYASSRRPEDLVEEFDIADVRIPAPLAADYNVAPTKEVYAVVERPPSSESPEPPQRQLRVLTWGLVPSWAKDPSIGN
RMINARMETVAEKPAYKRAFAKRRCLLPADGYYEWYPTEEQTKAGKPRKQPFFIRPKDHGVLAMAGLYEIWRDPTKGDED
PDRFRWTCTVITTEAEDALGHIHDRMPLMVGRERWADWLDPTAPQDHLLELLVPAAPGTLEAYPVAALVSNVRNNGPELV
EPLPLAPDGKVVS

Sequences:

>Translated_253_residues
MCGRYASSRRPEDLVEEFDIADVRIPAPLAADYNVAPTKEVYAVVERPPSSESPEPPQRQLRVLTWGLVPSWAKDPSIGN
RMINARMETVAEKPAYKRAFAKRRCLLPADGYYEWYPTEEQTKAGKPRKQPFFIRPKDHGVLAMAGLYEIWRDPTKGDED
PDRFRWTCTVITTEAEDALGHIHDRMPLMVGRERWADWLDPTAPQDHLLELLVPAAPGTLEAYPVAALVSNVRNNGPELV
EPLPLAPDGKVVS
>Mature_253_residues
MCGRYASSRRPEDLVEEFDIADVRIPAPLAADYNVAPTKEVYAVVERPPSSESPEPPQRQLRVLTWGLVPSWAKDPSIGN
RMINARMETVAEKPAYKRAFAKRRCLLPADGYYEWYPTEEQTKAGKPRKQPFFIRPKDHGVLAMAGLYEIWRDPTKGDED
PDRFRWTCTVITTEAEDALGHIHDRMPLMVGRERWADWLDPTAPQDHLLELLVPAAPGTLEAYPVAALVSNVRNNGPELV
EPLPLAPDGKVVS

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=286, Percent_Identity=30.0699300699301, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI54607104, Length=286, Percent_Identity=30.0699300699301, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI48994894, Length=252, Percent_Identity=31.3492063492063, Blast_Score=92, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323761, Length=233, Percent_Identity=31.7596566523605, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21355761, Length=238, Percent_Identity=28.9915966386555, Blast_Score=85, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 28494; Mature: 28494

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRYASSRRPEDLVEEFDIADVRIPAPLAADYNVAPTKEVYAVVERPPSSESPEPPQRQ
CCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHEEECCCCCCCCCCHHHH
LRVLTWGLVPSWAKDPSIGNRMINARMETVAEKPAYKRAFAKRRCLLPADGYYEWYPTEE
HEEHEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEECCCCH
QTKAGKPRKQPFFIRPKDHGVLAMAGLYEIWRDPTKGDEDPDRFRWTCTVITTEAEDALG
HHHCCCCCCCCEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECHHHHHH
HIHDRMPLMVGRERWADWLDPTAPQDHLLELLVPAAPGTLEAYPVAALVSNVRNNGPELV
HHHHCCCHHHCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHH
EPLPLAPDGKVVS
CCCCCCCCCCCCC
>Mature Secondary Structure
MCGRYASSRRPEDLVEEFDIADVRIPAPLAADYNVAPTKEVYAVVERPPSSESPEPPQRQ
CCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHEEECCCCCCCCCCHHHH
LRVLTWGLVPSWAKDPSIGNRMINARMETVAEKPAYKRAFAKRRCLLPADGYYEWYPTEE
HEEHEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEECCCCH
QTKAGKPRKQPFFIRPKDHGVLAMAGLYEIWRDPTKGDEDPDRFRWTCTVITTEAEDALG
HHHCCCCCCCCEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECHHHHHH
HIHDRMPLMVGRERWADWLDPTAPQDHLLELLVPAAPGTLEAYPVAALVSNVRNNGPELV
HHHHCCCHHHCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHH
EPLPLAPDGKVVS
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]