| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715931
Identifier: 119715931
GI number: 119715931
Start: 1802760
End: 1803191
Strand: Reverse
Name: 119715931
Synonym: Noca_1696
Alternate gene names: NA
Gene position: 1803191-1802760 (Counterclockwise)
Preceding gene: 119715932
Following gene: 119715929
Centisome position: 36.17
GC content: 65.74
Gene sequence:
>432_bases ATGCGGATCGGCGACGTACTCAAGGCCAAGCCCAGTCATGAGGTCATCACCATCGGCCCGGATGCCGGCGTACGCGAGCT GATCGCGAAGCTGGCCGAGCACAACGTGGGGGCCCTGATCGTCAGCTCGGACGGCACCAGCGTCGACGGGATCGTCAGCG AGCGCGACGTGGTCCGCCACCTCCACAGCGACGGCACGGTCATCAACAACACCGTGCAGGCGATCATGACCACCGTCGTC CAGACGTGCGACCAGGAGACCCAGGTCGACGAGCTCATGAAGACGATGACGGAACGCCGGGTGCGCCACGTCCCCGTGGT CGAGGGGGGCCGCTTGGTCGGCATCATCAGCATCGGCGACGTGGTCAAGCACCGCATCGACCAGCTGGAGTTCGAGCGCG ACCAGCTCGACAGCTACGTCCACCAGACCTGA
Upstream 100 bases:
>100_bases CCCGGGACCGGCCGCTGGCTGGACGCAGGGGTGTACGGGTGACCGGACCGACCAGTACGGTCTGCGCATAGGTCGGCCAG GACCCTACGGAGGTGGAGCG
Downstream 100 bases:
>100_bases CGGTCCCTTGGCGGGTGCGCGGGACCCGGGTCAGCGGCCCTCGCTCTCGGCGAGCACCAGTGCGAGGTCGTCGGCCATCC GCTGGCCGCTCCAGGCGAGC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; Signal Transduction Protein With CBS Domains; CBS Domain Protein; CBS Domain Containing Protein; Signal Transduction Protein; Signal-Transduction Protein With CBS Domains; XRE Family Transcriptional Regulator; Signal Transduction Protein With Cbs Domains; CBS Domain-Containing Signal Transduction Protein; CBS Domain Pair Family; CBS Domain Containing Membrane Protein; Inosine-5-Monophosphate Dehydrogenase; IMP Dehydrogenase; CBS Domain Signal-Transduction Protein; Transcriptional Regulator; Cbs Domain Containing Protein; Signal-Transduction Protein With CBS; Transcriptional Regulator XRE Family Protein; CBS Domains; CBS Domain Pair Family Protein; Inosine-5`-Monophosphate Dehydrogenase Protein; Transcriptional Regulator XRE Family; Inosine-5prime-Monophosphate Dehydrogenase Protein; Signal-Transduction Protein With Cbs Domains
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRIGDVLKAKPSHEVITIGPDAGVRELIAKLAEHNVGALIVSSDGTSVDGIVSERDVVRHLHSDGTVINNTVQAIMTTVV QTCDQETQVDELMKTMTERRVRHVPVVEGGRLVGIISIGDVVKHRIDQLEFERDQLDSYVHQT
Sequences:
>Translated_143_residues MRIGDVLKAKPSHEVITIGPDAGVRELIAKLAEHNVGALIVSSDGTSVDGIVSERDVVRHLHSDGTVINNTVQAIMTTVV QTCDQETQVDELMKTMTERRVRHVPVVEGGRLVGIISIGDVVKHRIDQLEFERDQLDSYVHQT >Mature_143_residues MRIGDVLKAKPSHEVITIGPDAGVRELIAKLAEHNVGALIVSSDGTSVDGIVSERDVVRHLHSDGTVINNTVQAIMTTVV QTCDQETQVDELMKTMTERRVRHVPVVEGGRLVGIISIGDVVKHRIDQLEFERDQLDSYVHQT
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15742; Mature: 15742
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGDVLKAKPSHEVITIGPDAGVRELIAKLAEHNVGALIVSSDGTSVDGIVSERDVVRH CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHH LHSDGTVINNTVQAIMTTVVQTCDQETQVDELMKTMTERRVRHVPVVEGGRLVGIISIGD HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCEEEEEHHHH VVKHRIDQLEFERDQLDSYVHQT HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRIGDVLKAKPSHEVITIGPDAGVRELIAKLAEHNVGALIVSSDGTSVDGIVSERDVVRH CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHH LHSDGTVINNTVQAIMTTVVQTCDQETQVDELMKTMTERRVRHVPVVEGGRLVGIISIGD HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCEEEEEHHHH VVKHRIDQLEFERDQLDSYVHQT HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA