| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is tagD [H]
Identifier: 119715926
GI number: 119715926
Start: 1799236
End: 1799634
Strand: Reverse
Name: tagD [H]
Synonym: Noca_1691
Alternate gene names: 119715926
Gene position: 1799634-1799236 (Counterclockwise)
Preceding gene: 119715929
Following gene: 119715925
Centisome position: 36.09
GC content: 67.92
Gene sequence:
>399_bases ATGTCTCGCACGGTCATCACCTTCGGCACGTTCGACGTCTTCCACGTCGGGCACCTCCGGGTGATCGAGCGCGCCGCGGC GCTGGGCGACCGGCTGGTCGTCGGCGTCTCGGCCGACGAGCTGAACCTGCGCAAGAAGGGCCGCGAGCCGGTCTTCAGCC AGGCCGAGCGGCTCGCGATCGTCGCCGCCCTCAAGCCCGTCGACGAGGTCTTCGTCGAGGAGAGCCTCGAGCTCAAGCGC CACTACATCGAGGAGTACGCCGCCGACGTGCTCGTGATGGGCGACGACTGGGCCGGGAAGTTCGACGAGTTCGAGGACAT CTGCGAGGTCGTCTACCTGTCCCGGACGCCGGCGATCTCGACCACGGCGCTGATCGAGAAGATCTCCGGCGGCAGCTGA
Upstream 100 bases:
>100_bases GACGGCGCAGCTCGTCGGCGGCCGGGTTGGGCGTGATCATCGAGATGGTGGTCATCGCCCGCCATCCTGCCCCAGGGGTG CGCGTGCCAGAATGCGCCGC
Downstream 100 bases:
>100_bases CCTCCCCGGTCCGGGTGTGTCGCCCGTCTAGGCTGGGGCACCGGGCCGGGCGAGTACCGCGGCCAGGCGCGCACGCAGGG CGCCGTCAGCTTTCGTTCTC
Product: glycerol-3-phosphate cytidylyltransferase
Products: NA
Alternate protein names: GCT; Gro-PCT; CDP-glycerol pyrophosphorylase; Teichoic acid biosynthesis protein D [H]
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSRTVITFGTFDVFHVGHLRVIERAAALGDRLVVGVSADELNLRKKGREPVFSQAERLAIVAALKPVDEVFVEESLELKR HYIEEYAADVLVMGDDWAGKFDEFEDICEVVYLSRTPAISTTALIEKISGGS
Sequences:
>Translated_132_residues MSRTVITFGTFDVFHVGHLRVIERAAALGDRLVVGVSADELNLRKKGREPVFSQAERLAIVAALKPVDEVFVEESLELKR HYIEEYAADVLVMGDDWAGKFDEFEDICEVVYLSRTPAISTTALIEKISGGS >Mature_131_residues SRTVITFGTFDVFHVGHLRVIERAAALGDRLVVGVSADELNLRKKGREPVFSQAERLAIVAALKPVDEVFVEESLELKRH YIEEYAADVLVMGDDWAGKFDEFEDICEVVYLSRTPAISTTALIEKISGGS
Specific function: Provides activated glycerol phosphate for teichoic acid synthesis, via incorporation into both the linkage unit and the teichoic acid polymer by TagB and TagF [H]
COG id: COG0615
COG function: function code MI; Cytidylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505651, Length=126, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI296841136, Length=126, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1789432, Length=133, Percent_Identity=34.5864661654135, Blast_Score=67, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193203447, Length=93, Percent_Identity=34.4086021505376, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17509873, Length=93, Percent_Identity=34.4086021505376, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR006409 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.39 [H]
Molecular weight: Translated: 14643; Mature: 14512
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTVITFGTFDVFHVGHLRVIERAAALGDRLVVGVSADELNLRKKGREPVFSQAERLAI CCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHH VAALKPVDEVFVEESLELKRHYIEEYAADVLVMGDDWAGKFDEFEDICEVVYLSRTPAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCH TTALIEKISGGS HHHHHHHHCCCC >Mature Secondary Structure SRTVITFGTFDVFHVGHLRVIERAAALGDRLVVGVSADELNLRKKGREPVFSQAERLAI CCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHH VAALKPVDEVFVEESLELKRHYIEEYAADVLVMGDDWAGKFDEFEDICEVVYLSRTPAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCH TTALIEKISGGS HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1906926; 8393871; 9384377; 9182537; 11487587; 10508782 [H]