| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715920
Identifier: 119715920
GI number: 119715920
Start: 1791391
End: 1793307
Strand: Reverse
Name: 119715920
Synonym: Noca_1685
Alternate gene names: NA
Gene position: 1793307-1791391 (Counterclockwise)
Preceding gene: 119715921
Following gene: 119715913
Centisome position: 35.97
GC content: 72.09
Gene sequence:
>1917_bases GTGGTCGAGCTCGATACCCGACCGAGACGGCGCAGGTCCTGGCCGCGCCGCCTCTTCAGCCTGCTCCGGTGGGGATTCCT GCTCGCCGTCCTCGCGCTCAGCGTGCCCGGCCCGTTCGGCCCGGCCCGGCTGGGCGTCACGGTCGTGTCCGGACCGTCGA TGCTGCCGACGTACGACCCCGGTGACCTGGTCCTCACCTGGCGCTCCGGGTCCTACCCGGCGGGGACGCCGATCGTCTAC CGCATCCCCGACGGCCCCGGGGCCGGCCTGAACATCGTCCACCGGGTCGTCGAGGTGCGTCCCGACGGCACCCACGTGAC GAAGGGCGACCACAACGACCACGTCGACCCGTGGCGTCCGACCGACGCGGACGTCACGGGTCGGGTGGCGCTGCACGTGC CGCGCGGCGGGATCCTGCTGCGCTGGTTCGGGTCACCCCTGCTGCTCGCGATGATCTCCGGCCTGCTCGCCGGCGCCTCG GTGTTCGGGTGGGCGGGCCGGGGCGGGGGCCCCCCACCCCCGGGCGGTGGCGCCGGCATGCCCCGGCGCCACCGCCGACC CGCCCCGCGCAGCAGGGTCGCGCTGCGGCTCGCAACAGCGGGGACGGCGCTGGCTGCGGCACTGGCCTCGACGCTGACCG CGACCAGCGCGTCCGCGGCCCCGATCGGGACCCTCACCTCGGCCGACCTGGACGCGTTCACGGTGCCGAGCTCGTTGGCG GCCAACCCGGTCTCCTACGAGCAGGTCCTCACCAGCGAGACCGCGCTGGAGTACTGCGCGACCGTGACGGTCACCAACCA CTCCGACCAGGCCGTGGAGTGGGAGATCACGCTCAACATCTCCCAGCAGCCCTACAACGCCACCGCCGTGTCGTCGTCGT ACAACGTGACCACCGTGTCCTTCCAGCCGAACCTGTGGCGGGTCAGGGGCGTCGAGTTCAACTCCGTGCTCGCCGCAGGT GGGTCGTACGTGTGGGGCTACTGCGGCACCCGCACGCCGCCCGACCTCGCCGACGCGACCGCGGTCGCGACCGTCACCAG CTCGGGCGGCGGCCAGTACTGCGCGACCGTGGCCGTGACGACGCTCTCGACGGACTGGATCCGGTGGCGGGTGAGCATCG ACCACGCGACCGTCGGGCTCACCGACAACAACTACTGGCTCGCCGCAGAGCCCACCAACGCCAGCAACGCCACGACGATC TCCTTCGACGGCGGGACCGGCACCTGGGTGGTGCGCGGCTCGGGCAGCAACGAGTACGTCCGGGCCACCAGCCCCGCCAG CTGGAGCTACTGCGCACCGATGTCGGCGGCCTCCCCGCTCGTCGATGCGACCGTGAGCGCGACCATCACCAGCTCCGGCG GTGGGCAGTACTGCGCCGACGTGACGGTCTCGACGCTGTCCCCGACGTACGTGAAGTGGCGTGCGACCATCGACCACACC ACCCCCGGCCTGACCAACGCCGTGTACTGGCTCGGCGCCCAGCCGACCAACTTCTGGAACGCGACGAGCATCTCGTTCGG CTCGGGCGCCTGGGTGCTCAAGGGCACGGCGAGCAACGAGCTGATCCGGCTCGGCGAGCCGGTCAGCTGGGGCTACTGCG CGCCGACCAACCCGGACGCCGACCTCGTGGACGCGACGGTCTCGGCCACGATCACCAGCTCCGGGGGCGGGACCTACTGC GCGAACGTCACGGTGTCGACGACCTCGACCCAGCCCGTGCGCTGGCGGGCGACCATCGACCACACCACCCCCGGGCTGAC CGCGCCGACGTACTGGCTGGTCGCCCAGCCGACGAACTTCTGGAACGCCACCAGCGTCTCCTTCACCGCGCTCACCGGGA CCTGGGTGCTGCACGGCCTGAGCTGGAACGAGCTGATCCAGGCCGGCCAGCCCCAGACGTTCGGCTACTGCACCTGA
Upstream 100 bases:
>100_bases GACGGCGGACTTCACCGTCAACGCTCCCGCTGCCGACGTCACCGAGGTCGCCGTCGTGATCAGCGGAACGACGACGCCGT AGCCCGCTGTCCGGCAGCCG
Downstream 100 bases:
>100_bases GCCCCACCGGTCGGGACAGGGGCCTCCGGGAGGTCATGCGGACGGTGTCACCGCTTGCTCGGTCCGCGTGACTGTGAGTG TGGTGCTGCGGCCCGCTCAG
Product: peptidase S26B, signal peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MVELDTRPRRRRSWPRRLFSLLRWGFLLAVLALSVPGPFGPARLGVTVVSGPSMLPTYDPGDLVLTWRSGSYPAGTPIVY RIPDGPGAGLNIVHRVVEVRPDGTHVTKGDHNDHVDPWRPTDADVTGRVALHVPRGGILLRWFGSPLLLAMISGLLAGAS VFGWAGRGGGPPPPGGGAGMPRRHRRPAPRSRVALRLATAGTALAAALASTLTATSASAAPIGTLTSADLDAFTVPSSLA ANPVSYEQVLTSETALEYCATVTVTNHSDQAVEWEITLNISQQPYNATAVSSSYNVTTVSFQPNLWRVRGVEFNSVLAAG GSYVWGYCGTRTPPDLADATAVATVTSSGGGQYCATVAVTTLSTDWIRWRVSIDHATVGLTDNNYWLAAEPTNASNATTI SFDGGTGTWVVRGSGSNEYVRATSPASWSYCAPMSAASPLVDATVSATITSSGGGQYCADVTVSTLSPTYVKWRATIDHT TPGLTNAVYWLGAQPTNFWNATSISFGSGAWVLKGTASNELIRLGEPVSWGYCAPTNPDADLVDATVSATITSSGGGTYC ANVTVSTTSTQPVRWRATIDHTTPGLTAPTYWLVAQPTNFWNATSVSFTALTGTWVLHGLSWNELIQAGQPQTFGYCT
Sequences:
>Translated_638_residues MVELDTRPRRRRSWPRRLFSLLRWGFLLAVLALSVPGPFGPARLGVTVVSGPSMLPTYDPGDLVLTWRSGSYPAGTPIVY RIPDGPGAGLNIVHRVVEVRPDGTHVTKGDHNDHVDPWRPTDADVTGRVALHVPRGGILLRWFGSPLLLAMISGLLAGAS VFGWAGRGGGPPPPGGGAGMPRRHRRPAPRSRVALRLATAGTALAAALASTLTATSASAAPIGTLTSADLDAFTVPSSLA ANPVSYEQVLTSETALEYCATVTVTNHSDQAVEWEITLNISQQPYNATAVSSSYNVTTVSFQPNLWRVRGVEFNSVLAAG GSYVWGYCGTRTPPDLADATAVATVTSSGGGQYCATVAVTTLSTDWIRWRVSIDHATVGLTDNNYWLAAEPTNASNATTI SFDGGTGTWVVRGSGSNEYVRATSPASWSYCAPMSAASPLVDATVSATITSSGGGQYCADVTVSTLSPTYVKWRATIDHT TPGLTNAVYWLGAQPTNFWNATSISFGSGAWVLKGTASNELIRLGEPVSWGYCAPTNPDADLVDATVSATITSSGGGTYC ANVTVSTTSTQPVRWRATIDHTTPGLTAPTYWLVAQPTNFWNATSVSFTALTGTWVLHGLSWNELIQAGQPQTFGYCT >Mature_638_residues MVELDTRPRRRRSWPRRLFSLLRWGFLLAVLALSVPGPFGPARLGVTVVSGPSMLPTYDPGDLVLTWRSGSYPAGTPIVY RIPDGPGAGLNIVHRVVEVRPDGTHVTKGDHNDHVDPWRPTDADVTGRVALHVPRGGILLRWFGSPLLLAMISGLLAGAS VFGWAGRGGGPPPPGGGAGMPRRHRRPAPRSRVALRLATAGTALAAALASTLTATSASAAPIGTLTSADLDAFTVPSSLA ANPVSYEQVLTSETALEYCATVTVTNHSDQAVEWEITLNISQQPYNATAVSSSYNVTTVSFQPNLWRVRGVEFNSVLAAG GSYVWGYCGTRTPPDLADATAVATVTSSGGGQYCATVAVTTLSTDWIRWRVSIDHATVGLTDNNYWLAAEPTNASNATTI SFDGGTGTWVVRGSGSNEYVRATSPASWSYCAPMSAASPLVDATVSATITSSGGGQYCADVTVSTLSPTYVKWRATIDHT TPGLTNAVYWLGAQPTNFWNATSISFGSGAWVLKGTASNELIRLGEPVSWGYCAPTNPDADLVDATVSATITSSGGGTYC ANVTVSTTSTQPVRWRATIDHTTPGLTAPTYWLVAQPTNFWNATSVSFTALTGTWVLHGLSWNELIQAGQPQTFGYCT
Specific function: Unknown
COG id: COG0681
COG function: function code U; Signal peptidase I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67299; Mature: 67299
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELDTRPRRRRSWPRRLFSLLRWGFLLAVLALSVPGPFGPARLGVTVVSGPSMLPTYDP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCC GDLVLTWRSGSYPAGTPIVYRIPDGPGAGLNIVHRVVEVRPDGTHVTKGDHNDHVDPWRP CCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHEECCCCCEECCCCCCCCCCCCCC TDADVTGRVALHVPRGGILLRWFGSPLLLAMISGLLAGASVFGWAGRGGGPPPPGGGAGM CCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCC PRRHRRPAPRSRVALRLATAGTALAAALASTLTATSASAAPIGTLTSADLDAFTVPSSLA CHHHCCCCCCHHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHC ANPVSYEQVLTSETALEYCATVTVTNHSDQAVEWEITLNISQQPYNATAVSSSYNVTTVS CCCCCHHHHHHHHHHHEEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEECCCCEEEEEE FQPNLWRVRGVEFNSVLAAGGSYVWGYCGTRTPPDLADATAVATVTSSGGGQYCATVAVT ECCCCEEEECCEEHHEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEE TLSTDWIRWRVSIDHATVGLTDNNYWLAAEPTNASNATTISFDGGTGTWVVRGSGSNEYV EEECCEEEEEEEECEEEEEEECCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCEE RATSPASWSYCAPMSAASPLVDATVSATITSSGGGQYCADVTVSTLSPTYVKWRATIDHT EECCCCCCCEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECCC TPGLTNAVYWLGAQPTNFWNATSISFGSGAWVLKGTASNELIRLGEPVSWGYCAPTNPDA CCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCC DLVDATVSATITSSGGGTYCANVTVSTTSTQPVRWRATIDHTTPGLTAPTYWLVAQPTNF HHEEEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCC WNATSVSFTALTGTWVLHGLSWNELIQAGQPQTFGYCT CCCCCEEEEEEEEEEEEECCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVELDTRPRRRRSWPRRLFSLLRWGFLLAVLALSVPGPFGPARLGVTVVSGPSMLPTYDP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCC GDLVLTWRSGSYPAGTPIVYRIPDGPGAGLNIVHRVVEVRPDGTHVTKGDHNDHVDPWRP CCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHEECCCCCEECCCCCCCCCCCCCC TDADVTGRVALHVPRGGILLRWFGSPLLLAMISGLLAGASVFGWAGRGGGPPPPGGGAGM CCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCC PRRHRRPAPRSRVALRLATAGTALAAALASTLTATSASAAPIGTLTSADLDAFTVPSSLA CHHHCCCCCCHHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHC ANPVSYEQVLTSETALEYCATVTVTNHSDQAVEWEITLNISQQPYNATAVSSSYNVTTVS CCCCCHHHHHHHHHHHEEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEECCCCEEEEEE FQPNLWRVRGVEFNSVLAAGGSYVWGYCGTRTPPDLADATAVATVTSSGGGQYCATVAVT ECCCCEEEECCEEHHEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEE TLSTDWIRWRVSIDHATVGLTDNNYWLAAEPTNASNATTISFDGGTGTWVVRGSGSNEYV EEECCEEEEEEEECEEEEEEECCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCEE RATSPASWSYCAPMSAASPLVDATVSATITSSGGGQYCADVTVSTLSPTYVKWRATIDHT EECCCCCCCEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECCC TPGLTNAVYWLGAQPTNFWNATSISFGSGAWVLKGTASNELIRLGEPVSWGYCAPTNPDA CCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCC DLVDATVSATITSSGGGTYCANVTVSTTSTQPVRWRATIDHTTPGLTAPTYWLVAQPTNF HHEEEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCC WNATSVSFTALTGTWVLHGLSWNELIQAGQPQTFGYCT CCCCCEEEEEEEEEEEEECCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA