| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715903
Identifier: 119715903
GI number: 119715903
Start: 1772642
End: 1774711
Strand: Direct
Name: 119715903
Synonym: Noca_1668
Alternate gene names: NA
Gene position: 1772642-1774711 (Clockwise)
Preceding gene: 119715902
Following gene: 119715904
Centisome position: 35.55
GC content: 71.98
Gene sequence:
>2070_bases ATGCCGAGGACCGAGCTGCCACTGGTCGTGAACGTCAGCCTCGCCGGCCGTGAGCGTGACTACGACGAGACCGTCACCTT CCTGCACCGCCGGTTCCGGATCAGGCGGATCGGCACGGACGGGGACCTCGCGGCCGCCGAGGAGCTGGTGCGTGCGATGG CGCCACGGGCCACGGCGATCGCGGTCAGCGGGCTGCGCGAGGCCAAGGCCAGCGGGCTGTACGACGGCGAGCTGACCGCG ATCGAGCGGGTGGTCCGCGCCACCGACGCGGTCCCGGTCACGGACGGGCATGCCCTCCTCGGCGTGCTCCAGGAGTGGGC GGTACGGCGCGTCCAGACCGAGCTGCCGGGCTACTTCGACAACGCCCGCACCGTCGTCCTCGGCGGCCAGAACCACGAGC GCACCACCCGGATCCTGCGCGAGTACACCGCCAACCTCGAGTTCGCCGACCCGCTGCTGCGCCTCGACCTGCCCGCCCGC CTCGACGCCAACCCGCTGCTCGCGGTCGCGGCGGACCTCGGCCGGTCCTCGCTGGGGCTGCTGCCGGGCCTGGTGCGGGC CCAGCTCCAGGCCCCTGGCCAGGTGGTCAGCCACGCCCTCGCCCGCCGCGCGGCCCGGGACTGCGACGTCGTCGTCGGGA CGTACGAGGAGCTCGCGGGCTTCGGGCTCGAGGACCTCGCGGGCAAGACCCTGATCAGCAGGTCGATCTCCGCGGAGCGG CTCACCGAGCTGGGCGACCGCGGGGTCGACATGGTCATCGACGTGACGCCCCAGCCGTTCGGGGTCACCGTGAGCGCGGC GGTGCTCGAAGCGCTGATGCTGGCGACCGTGCACGCCTCCGGCCGGCTCACCAACGACGACCTCCTGGAGATGATCGCCG CCGCCGGCTTCGAGCCACGGGTCCTCTACCCGAACGGGTTCAAGCGCAAGAGCCGGTTCGCGTTCGTCATCCACCCCCTG TCGCAGCAGTACTTCAACAACGTCGAGCCGCTCCGGACCCTCTCCAAGATCGCGCCGGGCGTGGTCATGGACGCCGTGGA GAAGGCGGTCGCCTATGCGCCGCCGTTCACCTACAGCCACGTCACCGGCATCGTCTCCCCGACCGGCGCGGAGGCGGAGG GCTGGCTGATCTCGGTCGGCGGCACCCCCAAGGAGCTGATGGCGCACAGCCCCGAGTTCACCTACGGGCGGCTGCTCGCC GCGGCGGAGACGGCGCGCCGGCTGGGCGCCCAGATCATGGGTCTCGGCGCGTTCACCAAGGTGGTCGGCGATGCCGGGGT CACCGTGGCGAAGAAGGCGCCGCTCCCGATCACGACCGGCAACAGCTACAGCGCCGCCGGTGCCCTGTGGGCGGCGCACG AGGCGCTGCTCCAGCTCGGCCTGGCGCCGGTGGACGACCAGGGTCACCTCAAGGGCAAGGCGATGGTGGTCGGCGCCACC GGGGCGATCGGCTCGGTGTGCGCACGCCTGCTCGCGCTCGCGAGCGCCGAGCTGTGGCTGGTCTCGCCGGAGTCCGCGAA GCTGCTCGCCCTCAAGCAGGAGATCCAGCGGGAGAACCCCAGGGCGAAGGTGCACGTCGCGGCCACGCCGGACGACCACC TGGCGGCGATGGACCTGATCGTCACCGCCACCTCCGGCGCCGGCAAGCGGGTGCTCGACATCATGGCGGTCAAGCCGGGC TGCGTGATCACCGACGTGGCGCGTCCGTTGGACCTCTCGGCCGAGGACGTGGCCCGGCGGCCGGACGTGCTCGTGGTGGA GTCGGGCGAGATCGAGCTGCCCGGCGACGTACGGATGAAGAACATCGGGCTGCCCAAGAACGTGGCCTACGCGTGCCTGG CCGAGACCGTCGTCCTCGCCCTCGAGGGCCGCTACGAGACGTTCACCGTCGGTCGCAACATCGAGTGGCCGAAGGTCAAG GAGATCTACAAGCTCGGGCTCAAGCACGGGATGCGCCTGGCGACGATCTCGGGGGTGAACGGCATCTACACCGCCGAGCA CATCGCGGGCATCCGCGAGCGCGCGCTCGCGGCCCGAGCCGCCGCAGGGGCCAGCCGGACCGGGTCGTGA
Upstream 100 bases:
>100_bases TGGTGTGCCCGTCCTTCGACTCCTACGCGGGCCGGCTCCTCGACTACATGGTCGAGCACCCGGAGATCAACGCCGCGGCG ATGGTCTGAGGGTGAGCGCG
Downstream 100 bases:
>100_bases CGCTCGGCGCGCGCACTGATGACGTTCGTCCCTGCCCGTCGACCGCGGAGGGCGTGACGATGGGCGCTACCAGCGGGTCA TGAGGGTGAGGCGGTCATGG
Product: putative dehydrogenase
Products: NA
Alternate protein names: Aminotransferase Class-III; Dehydrogenase; Dehydrogenase-Like; Class-III Aminotransferase; Ornithine/Acetylornithine Aminotransferase; Dehydrogenase-Like Protein; Acetylornithine Transaminase; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MPRTELPLVVNVSLAGRERDYDETVTFLHRRFRIRRIGTDGDLAAAEELVRAMAPRATAIAVSGLREAKASGLYDGELTA IERVVRATDAVPVTDGHALLGVLQEWAVRRVQTELPGYFDNARTVVLGGQNHERTTRILREYTANLEFADPLLRLDLPAR LDANPLLAVAADLGRSSLGLLPGLVRAQLQAPGQVVSHALARRAARDCDVVVGTYEELAGFGLEDLAGKTLISRSISAER LTELGDRGVDMVIDVTPQPFGVTVSAAVLEALMLATVHASGRLTNDDLLEMIAAAGFEPRVLYPNGFKRKSRFAFVIHPL SQQYFNNVEPLRTLSKIAPGVVMDAVEKAVAYAPPFTYSHVTGIVSPTGAEAEGWLISVGGTPKELMAHSPEFTYGRLLA AAETARRLGAQIMGLGAFTKVVGDAGVTVAKKAPLPITTGNSYSAAGALWAAHEALLQLGLAPVDDQGHLKGKAMVVGAT GAIGSVCARLLALASAELWLVSPESAKLLALKQEIQRENPRAKVHVAATPDDHLAAMDLIVTATSGAGKRVLDIMAVKPG CVITDVARPLDLSAEDVARRPDVLVVESGEIELPGDVRMKNIGLPKNVAYACLAETVVLALEGRYETFTVGRNIEWPKVK EIYKLGLKHGMRLATISGVNGIYTAEHIAGIRERALAARAAAGASRTGS
Sequences:
>Translated_689_residues MPRTELPLVVNVSLAGRERDYDETVTFLHRRFRIRRIGTDGDLAAAEELVRAMAPRATAIAVSGLREAKASGLYDGELTA IERVVRATDAVPVTDGHALLGVLQEWAVRRVQTELPGYFDNARTVVLGGQNHERTTRILREYTANLEFADPLLRLDLPAR LDANPLLAVAADLGRSSLGLLPGLVRAQLQAPGQVVSHALARRAARDCDVVVGTYEELAGFGLEDLAGKTLISRSISAER LTELGDRGVDMVIDVTPQPFGVTVSAAVLEALMLATVHASGRLTNDDLLEMIAAAGFEPRVLYPNGFKRKSRFAFVIHPL SQQYFNNVEPLRTLSKIAPGVVMDAVEKAVAYAPPFTYSHVTGIVSPTGAEAEGWLISVGGTPKELMAHSPEFTYGRLLA AAETARRLGAQIMGLGAFTKVVGDAGVTVAKKAPLPITTGNSYSAAGALWAAHEALLQLGLAPVDDQGHLKGKAMVVGAT GAIGSVCARLLALASAELWLVSPESAKLLALKQEIQRENPRAKVHVAATPDDHLAAMDLIVTATSGAGKRVLDIMAVKPG CVITDVARPLDLSAEDVARRPDVLVVESGEIELPGDVRMKNIGLPKNVAYACLAETVVLALEGRYETFTVGRNIEWPKVK EIYKLGLKHGMRLATISGVNGIYTAEHIAGIRERALAARAAAGASRTGS >Mature_688_residues PRTELPLVVNVSLAGRERDYDETVTFLHRRFRIRRIGTDGDLAAAEELVRAMAPRATAIAVSGLREAKASGLYDGELTAI ERVVRATDAVPVTDGHALLGVLQEWAVRRVQTELPGYFDNARTVVLGGQNHERTTRILREYTANLEFADPLLRLDLPARL DANPLLAVAADLGRSSLGLLPGLVRAQLQAPGQVVSHALARRAARDCDVVVGTYEELAGFGLEDLAGKTLISRSISAERL TELGDRGVDMVIDVTPQPFGVTVSAAVLEALMLATVHASGRLTNDDLLEMIAAAGFEPRVLYPNGFKRKSRFAFVIHPLS QQYFNNVEPLRTLSKIAPGVVMDAVEKAVAYAPPFTYSHVTGIVSPTGAEAEGWLISVGGTPKELMAHSPEFTYGRLLAA AETARRLGAQIMGLGAFTKVVGDAGVTVAKKAPLPITTGNSYSAAGALWAAHEALLQLGLAPVDDQGHLKGKAMVVGATG AIGSVCARLLALASAELWLVSPESAKLLALKQEIQRENPRAKVHVAATPDDHLAAMDLIVTATSGAGKRVLDIMAVKPGC VITDVARPLDLSAEDVARRPDVLVVESGEIELPGDVRMKNIGLPKNVAYACLAETVVLALEGRYETFTVGRNIEWPKVKE IYKLGLKHGMRLATISGVNGIYTAEHIAGIRERALAARAAAGASRTGS
Specific function: Unknown
COG id: COG5322
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73379; Mature: 73248
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTELPLVVNVSLAGRERDYDETVTFLHRRFRIRRIGTDGDLAAAEELVRAMAPRATAI CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHH AVSGLREAKASGLYDGELTAIERVVRATDAVPVTDGHALLGVLQEWAVRRVQTELPGYFD HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC NARTVVLGGQNHERTTRILREYTANLEFADPLLRLDLPARLDANPLLAVAADLGRSSLGL CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHEECCCCCCCCCCHHHHHHHCCCCHHHH LPGLVRAQLQAPGQVVSHALARRAARDCDVVVGTYEELAGFGLEDLAGKTLISRSISAER HHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHCCCHHHHHCHHHHHHCCCHHH LTELGDRGVDMVIDVTPQPFGVTVSAAVLEALMLATVHASGRLTNDDLLEMIAAAGFEPR HHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCE VLYPNGFKRKSRFAFVIHPLSQQYFNNVEPLRTLSKIAPGVVMDAVEKAVAYAPPFTYSH EECCCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH VTGIVSPTGAEAEGWLISVGGTPKELMAHSPEFTYGRLLAAAETARRLGAQIMGLGAFTK HHCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGDAGVTVAKKAPLPITTGNSYSAAGALWAAHEALLQLGLAPVDDQGHLKGKAMVVGAT HHCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC GAIGSVCARLLALASAELWLVSPESAKLLALKQEIQRENPRAKVHVAATPDDHLAAMDLI CCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHEEEE VTATSGAGKRVLDIMAVKPGCVITDVARPLDLSAEDVARRPDVLVVESGEIELPGDVRMK EEECCCCCCEEEEEEEECCCCEEECCCCCCCCCHHHHHCCCCEEEEECCCEECCCCCEEE NIGLPKNVAYACLAETVVLALEGRYETFTVGRNIEWPKVKEIYKLGLKHGMRLATISGVN CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCC GIYTAEHIAGIRERALAARAAAGASRTGS CCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PRTELPLVVNVSLAGRERDYDETVTFLHRRFRIRRIGTDGDLAAAEELVRAMAPRATAI CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHH AVSGLREAKASGLYDGELTAIERVVRATDAVPVTDGHALLGVLQEWAVRRVQTELPGYFD HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC NARTVVLGGQNHERTTRILREYTANLEFADPLLRLDLPARLDANPLLAVAADLGRSSLGL CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHEECCCCCCCCCCHHHHHHHCCCCHHHH LPGLVRAQLQAPGQVVSHALARRAARDCDVVVGTYEELAGFGLEDLAGKTLISRSISAER HHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHCCCHHHHHCHHHHHHCCCHHH LTELGDRGVDMVIDVTPQPFGVTVSAAVLEALMLATVHASGRLTNDDLLEMIAAAGFEPR HHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCE VLYPNGFKRKSRFAFVIHPLSQQYFNNVEPLRTLSKIAPGVVMDAVEKAVAYAPPFTYSH EECCCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH VTGIVSPTGAEAEGWLISVGGTPKELMAHSPEFTYGRLLAAAETARRLGAQIMGLGAFTK HHCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGDAGVTVAKKAPLPITTGNSYSAAGALWAAHEALLQLGLAPVDDQGHLKGKAMVVGAT HHCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC GAIGSVCARLLALASAELWLVSPESAKLLALKQEIQRENPRAKVHVAATPDDHLAAMDLI CCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHEEEE VTATSGAGKRVLDIMAVKPGCVITDVARPLDLSAEDVARRPDVLVVESGEIELPGDVRMK EEECCCCCCEEEEEEEECCCCEEECCCCCCCCCHHHHHCCCCEEEEECCCEECCCCCEEE NIGLPKNVAYACLAETVVLALEGRYETFTVGRNIEWPKVKEIYKLGLKHGMRLATISGVN CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCC GIYTAEHIAGIRERALAARAAAGASRTGS CCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA