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The map label for this gene is xylB [H]

Identifier: 119715890

GI number: 119715890

Start: 1757174

End: 1758823

Strand: Reverse

Name: xylB [H]

Synonym: Noca_1655

Alternate gene names: 119715890

Gene position: 1758823-1757174 (Counterclockwise)

Preceding gene: 119715891

Following gene: 119715889

Centisome position: 35.28

GC content: 74.06

Gene sequence:

>1650_bases
GTGACGCCGCCATCGGCCCTGTCAGCGCCGGGGCCGGCACCGGGGTCGGGGCCGTACCTGATCGGCGTCGACCTCGGCAC
CGGCGGACCCAAGGTCGCCCTCACCACGGCCCGGGGCCGGGTCCTGGGGTTCGAGGCCGAGCAGGTCGAGCTGCTGCTCT
CCCCCGGCGGCGGAGCCGAGCAGGACCCCGAGCAGTGGTGGTCCGCGATCGTGACCGCGACCCGACGGCTGCTCGCACGC
GGCCTGGTGCCGCTCGACGAGGTGGTCGCGATCTGCGTCGGGGCCCAGTGGGGCGGCCTGGTCCCCGTGGACACCACCGG
CCACCACCTGCGCAACGCACTGATCTGGATGGACAGCCGCGGCGCGCCGTACTCCCGGGCGGTGACGGGAGGACGGCTCG
CGATCCCGGGCGCGGGGTACGACGTACGACGCCTGCGGGAGTGGCTCCGCAAGACCGGCGGCGCCCCCAGCCGGACGGGC
AAGGACCCGGTCGGCATGACGCACTGGCTGCGCCGCCACGAGCCCGACGTCTACGCCGCCAGCGCCTACCTGCTCGACGT
CCCGGAGTACCTCACCATGCGGCTCTCGGGCCGCGCGGTCGCCGCCACCGACACCTCCACGTTGCGCTGGTGCACCGACA
ACCGGGACCCCGAGCGGGTGCGCTGGGACGCCGCGCTCGCCGAGCGCACCGGGATCGACGTCGCGAAGCTCCCGGAGCTC
GTGCCCCCGGCCAGCGTGGTCGGGCCACTGCACCCCGACGCGGCCGCCGAGCTCGGCCTGCCGGCCGCGGTCCAGGTGGT
GACGGGCACCTCGGACAGCATCGCCGCCGCCATCGGCGCCGGCGCGGTCGACGACTACCGCGGGCACCTCTACATCGGCA
CGTCCGCGTGGCTGAGCTGCCACGTCCCGTTCAAGCGCACCGACGTGCTGCGCAACATCGCCTCGCTGCCCGCAGCGGTC
CCAGGGCGCTACTGGGTCGCGACCGTCCAGGACGTGGCCGGCAAGGCGATCGACTGGCTGATCGACTCGGTCGTCTACCC
CGACGACGGGATGCTGGACGCCCACCCGGCCCCCGAGGACGCCGTCGAGCGGCTCAACGCCCTCGCGCTGACCGCGCCGC
CGGGCAGCAACGGCGTCGTGTTCACCCCCTGGCTCAACGGCGAGCGGACCCCCGTCGACGACCCGTTCCTCCGCGGCGGC
TGGTTCAACGTGTCGCTGACGACGACCCGGGCCGACCTCGCCCGCAGCGTGTTCGAGGGCATCGCGCTCAACGTGCGCTG
GATGAAGGAGTCGGTCGAGCGGTTCCTCGGCAAGGACCTGCCGGGTGGGTTCGCCGAGCTGGCCTTCGTCGGCGGCGGTG
CCCGTTCCGACCTCTGGTGCCAGACCCTCGCCGATGTCCTCGGGTGCACCATCCGCCAGGTCGAGGATCCGATCCTGGCC
AACGCCCGTGGCGCGGCCCTCGCCGCGGCGGTCGGGCTCGGTGTGGTCTCGTGGGACGAGATCGGCGGGCTGGTGCGGAC
CACCGGGACCTTCACCCCGGATCCCGCGCGGCGCGCGGTCTACGACCGCCAGTACCGCACGTTCACCCGGATCTACCGGC
GCAACCGTCGCCTGTACGCCGCCCACAACCGCCCCAGGAGGAACCGATGA

Upstream 100 bases:

>100_bases
TGGCCGGCTCCCGCCTGTACACCTCGATGGCCGACACCGACGAGGTCATCGACGACGCGCTCGAGCGGTTCGACCGGGTC
TTCGCCCTCGTCGAGGGCGT

Downstream 100 bases:

>100_bases
GCCCCGCGCCCCACCCGCTCCAGGAGCGGATCGCGCGCCGCGTGATGCGCACCGTCGGCGCCCTGCCGGCGCCGGTGCAG
CGCGCGTTCGCCGGCCGTCC

Product: carbohydrate kinase

Products: ADP; D-xylulose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MTPPSALSAPGPAPGSGPYLIGVDLGTGGPKVALTTARGRVLGFEAEQVELLLSPGGGAEQDPEQWWSAIVTATRRLLAR
GLVPLDEVVAICVGAQWGGLVPVDTTGHHLRNALIWMDSRGAPYSRAVTGGRLAIPGAGYDVRRLREWLRKTGGAPSRTG
KDPVGMTHWLRRHEPDVYAASAYLLDVPEYLTMRLSGRAVAATDTSTLRWCTDNRDPERVRWDAALAERTGIDVAKLPEL
VPPASVVGPLHPDAAAELGLPAAVQVVTGTSDSIAAAIGAGAVDDYRGHLYIGTSAWLSCHVPFKRTDVLRNIASLPAAV
PGRYWVATVQDVAGKAIDWLIDSVVYPDDGMLDAHPAPEDAVERLNALALTAPPGSNGVVFTPWLNGERTPVDDPFLRGG
WFNVSLTTTRADLARSVFEGIALNVRWMKESVERFLGKDLPGGFAELAFVGGGARSDLWCQTLADVLGCTIRQVEDPILA
NARGAALAAAVGLGVVSWDEIGGLVRTTGTFTPDPARRAVYDRQYRTFTRIYRRNRRLYAAHNRPRRNR

Sequences:

>Translated_549_residues
MTPPSALSAPGPAPGSGPYLIGVDLGTGGPKVALTTARGRVLGFEAEQVELLLSPGGGAEQDPEQWWSAIVTATRRLLAR
GLVPLDEVVAICVGAQWGGLVPVDTTGHHLRNALIWMDSRGAPYSRAVTGGRLAIPGAGYDVRRLREWLRKTGGAPSRTG
KDPVGMTHWLRRHEPDVYAASAYLLDVPEYLTMRLSGRAVAATDTSTLRWCTDNRDPERVRWDAALAERTGIDVAKLPEL
VPPASVVGPLHPDAAAELGLPAAVQVVTGTSDSIAAAIGAGAVDDYRGHLYIGTSAWLSCHVPFKRTDVLRNIASLPAAV
PGRYWVATVQDVAGKAIDWLIDSVVYPDDGMLDAHPAPEDAVERLNALALTAPPGSNGVVFTPWLNGERTPVDDPFLRGG
WFNVSLTTTRADLARSVFEGIALNVRWMKESVERFLGKDLPGGFAELAFVGGGARSDLWCQTLADVLGCTIRQVEDPILA
NARGAALAAAVGLGVVSWDEIGGLVRTTGTFTPDPARRAVYDRQYRTFTRIYRRNRRLYAAHNRPRRNR
>Mature_548_residues
TPPSALSAPGPAPGSGPYLIGVDLGTGGPKVALTTARGRVLGFEAEQVELLLSPGGGAEQDPEQWWSAIVTATRRLLARG
LVPLDEVVAICVGAQWGGLVPVDTTGHHLRNALIWMDSRGAPYSRAVTGGRLAIPGAGYDVRRLREWLRKTGGAPSRTGK
DPVGMTHWLRRHEPDVYAASAYLLDVPEYLTMRLSGRAVAATDTSTLRWCTDNRDPERVRWDAALAERTGIDVAKLPELV
PPASVVGPLHPDAAAELGLPAAVQVVTGTSDSIAAAIGAGAVDDYRGHLYIGTSAWLSCHVPFKRTDVLRNIASLPAAVP
GRYWVATVQDVAGKAIDWLIDSVVYPDDGMLDAHPAPEDAVERLNALALTAPPGSNGVVFTPWLNGERTPVDDPFLRGGW
FNVSLTTTRADLARSVFEGIALNVRWMKESVERFLGKDLPGGFAELAFVGGGARSDLWCQTLADVLGCTIRQVEDPILAN
ARGAALAAAVGLGVVSWDEIGGLVRTTGTFTPDPARRAVYDRQYRTFTRIYRRNRRLYAAHNRPRRNR

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=575, Percent_Identity=22.6086956521739, Blast_Score=105, Evalue=9e-23,
Organism=Escherichia coli, GI1789987, Length=529, Percent_Identity=27.9773156899811, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1790005, Length=529, Percent_Identity=26.8431001890359, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1787789, Length=543, Percent_Identity=24.1252302025783, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1789138, Length=529, Percent_Identity=24.007561436673, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71986147, Length=166, Percent_Identity=27.710843373494, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71986140, Length=166, Percent_Identity=27.710843373494, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24657106, Length=570, Percent_Identity=24.3859649122807, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24657102, Length=570, Percent_Identity=24.3859649122807, Blast_Score=118, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.17

Molecular weight: Translated: 58983; Mature: 58851

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPSALSAPGPAPGSGPYLIGVDLGTGGPKVALTTARGRVLGFEAEQVELLLSPGGGAE
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEECCCCEEEEEECCCCCCC
QDPEQWWSAIVTATRRLLARGLVPLDEVVAICVGAQWGGLVPVDTTGHHLRNALIWMDSR
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCHHHCCEEEEEECC
GAPYSRAVTGGRLAIPGAGYDVRRLREWLRKTGGAPSRTGKDPVGMTHWLRRHEPDVYAA
CCCCHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEE
SAYLLDVPEYLTMRLSGRAVAATDTSTLRWCTDNRDPERVRWDAALAERTGIDVAKLPEL
HEEEEECHHHHHEEECCCEEEECCCCEEEEECCCCCHHHEEHHHHHHHHCCCCHHHCCCC
VPPASVVGPLHPDAAAELGLPAAVQVVTGTSDSIAAAIGAGAVDDYRGHLYIGTSAWLSC
CCCHHHCCCCCCCHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCEEEEECCCEEEE
HVPFKRTDVLRNIASLPAAVPGRYWVATVQDVAGKAIDWLIDSVVYPDDGMLDAHPAPED
ECCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
AVERLNALALTAPPGSNGVVFTPWLNGERTPVDDPFLRGGWFNVSLTTTRADLARSVFEG
HHHHHHEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHH
IALNVRWMKESVERFLGKDLPGGFAELAFVGGGARSDLWCQTLADVLGCTIRQVEDPILA
HEEEHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHC
NARGAALAAAVGLGVVSWDEIGGLVRTTGTFTPDPARRAVYDRQYRTFTRIYRRNRRLYA
CCCCHHHHHHHHCCCEEHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
AHNRPRRNR
ECCCCCCCC
>Mature Secondary Structure 
TPPSALSAPGPAPGSGPYLIGVDLGTGGPKVALTTARGRVLGFEAEQVELLLSPGGGAE
CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEECCCCEEEEEECCCCCCC
QDPEQWWSAIVTATRRLLARGLVPLDEVVAICVGAQWGGLVPVDTTGHHLRNALIWMDSR
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCHHHCCEEEEEECC
GAPYSRAVTGGRLAIPGAGYDVRRLREWLRKTGGAPSRTGKDPVGMTHWLRRHEPDVYAA
CCCCHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEE
SAYLLDVPEYLTMRLSGRAVAATDTSTLRWCTDNRDPERVRWDAALAERTGIDVAKLPEL
HEEEEECHHHHHEEECCCEEEECCCCEEEEECCCCCHHHEEHHHHHHHHCCCCHHHCCCC
VPPASVVGPLHPDAAAELGLPAAVQVVTGTSDSIAAAIGAGAVDDYRGHLYIGTSAWLSC
CCCHHHCCCCCCCHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCEEEEECCCEEEE
HVPFKRTDVLRNIASLPAAVPGRYWVATVQDVAGKAIDWLIDSVVYPDDGMLDAHPAPED
ECCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
AVERLNALALTAPPGSNGVVFTPWLNGERTPVDDPFLRGGWFNVSLTTTRADLARSVFEG
HHHHHHEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHH
IALNVRWMKESVERFLGKDLPGGFAELAFVGGGARSDLWCQTLADVLGCTIRQVEDPILA
HEEEHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHC
NARGAALAAAVGLGVVSWDEIGGLVRTTGTFTPDPARRAVYDRQYRTFTRIYRRNRRLYA
CCCCHHHHHHHHCCCEEHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
AHNRPRRNR
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-xylulose

Specific reaction: ATP + D-xylulose = ADP + D-xylulose 5-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA