| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715877
Identifier: 119715877
GI number: 119715877
Start: 1746657
End: 1747259
Strand: Reverse
Name: 119715877
Synonym: Noca_1642
Alternate gene names: NA
Gene position: 1747259-1746657 (Counterclockwise)
Preceding gene: 119715879
Following gene: 119715876
Centisome position: 35.04
GC content: 69.98
Gene sequence:
>603_bases GTGGGCCAGCCGATCGACAAGGAGCACCCCATGACCCCCACCAGCACGGCCAGCCTTCGCCGAGCCGTCGTCATCGGCGC CGTCGCCGGCGTGATCGCCTCCGTGGTGATGGCGATGTACGCGATGCTCGCTGCCTACACCAAGGACACCGGCTTCTTCA CGCCGATGTACCACATCGCGTCGCTGGTCACCGACGACGCCGACATGATGAAGTCGATGATGGCCGACCAGCAGAGCGGC GACGCGTTCACGTTCCTGGCCGGTCCGGCCATCCTCGGTGCGGTGATCCACATGATGACCGGCGCCGCGTACGGCGCGGC CTTCGGTGCGATCGCCCACCGCCTCCGCCTCGGCGGTGCCACCCTCGCCGGGGCGGGCCTGGTCTACGGCTTCCTCGTGT TCGCGCTGAGCGCGTACGTCGCCCTCCCGATCGCGGCCGCCGTGTTCGGCAGCGGAGACCCGATCGAGAACATGGCCGAG ATGGCCGGTTGGGGCACCTTCATCGTCGAGCACCTCATCTTCGGGGTGGTCCTCGGCGTCCTGGTGGCCGTCACCGCACG CACTCGGACCGCGCCGGCGCGCACCGCGGTCCCCGCGCACTGA
Upstream 100 bases:
>100_bases CGATCGACCAGCCTTCCCGGAACCGGCGCCGAGGTGTGTAAGCGCGCTCACCGACGGGCCCCTCCAACGGTCGGAACACT CGGTCCAGAGCCTGACCCAC
Downstream 100 bases:
>100_bases CCCCTCGCTGACCCCACGTCCCGTCAGCCGGGTGGCGGGCTCCGCCACCCGGCTGGACGTGGTCCGCCCCAAGCCCCGAC GAGGATGACACGATGGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGQPIDKEHPMTPTSTASLRRAVVIGAVAGVIASVVMAMYAMLAAYTKDTGFFTPMYHIASLVTDDADMMKSMMADQQSG DAFTFLAGPAILGAVIHMMTGAAYGAAFGAIAHRLRLGGATLAGAGLVYGFLVFALSAYVALPIAAAVFGSGDPIENMAE MAGWGTFIVEHLIFGVVLGVLVAVTARTRTAPARTAVPAH
Sequences:
>Translated_200_residues MGQPIDKEHPMTPTSTASLRRAVVIGAVAGVIASVVMAMYAMLAAYTKDTGFFTPMYHIASLVTDDADMMKSMMADQQSG DAFTFLAGPAILGAVIHMMTGAAYGAAFGAIAHRLRLGGATLAGAGLVYGFLVFALSAYVALPIAAAVFGSGDPIENMAE MAGWGTFIVEHLIFGVVLGVLVAVTARTRTAPARTAVPAH >Mature_199_residues GQPIDKEHPMTPTSTASLRRAVVIGAVAGVIASVVMAMYAMLAAYTKDTGFFTPMYHIASLVTDDADMMKSMMADQQSGD AFTFLAGPAILGAVIHMMTGAAYGAAFGAIAHRLRLGGATLAGAGLVYGFLVFALSAYVALPIAAAVFGSGDPIENMAEM AGWGTFIVEHLIFGVVLGVLVAVTARTRTAPARTAVPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20611; Mature: 20480
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQPIDKEHPMTPTSTASLRRAVVIGAVAGVIASVVMAMYAMLAAYTKDTGFFTPMYHIA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SLVTDDADMMKSMMADQQSGDAFTFLAGPAILGAVIHMMTGAAYGAAFGAIAHRLRLGGA HHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TLAGAGLVYGFLVFALSAYVALPIAAAVFGSGDPIENMAEMAGWGTFIVEHLIFGVVLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVAVTARTRTAPARTAVPAH HHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GQPIDKEHPMTPTSTASLRRAVVIGAVAGVIASVVMAMYAMLAAYTKDTGFFTPMYHIA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SLVTDDADMMKSMMADQQSGDAFTFLAGPAILGAVIHMMTGAAYGAAFGAIAHRLRLGGA HHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TLAGAGLVYGFLVFALSAYVALPIAAAVFGSGDPIENMAEMAGWGTFIVEHLIFGVVLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVAVTARTRTAPARTAVPAH HHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA