| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715875
Identifier: 119715875
GI number: 119715875
Start: 1744326
End: 1745627
Strand: Reverse
Name: 119715875
Synonym: Noca_1640
Alternate gene names: NA
Gene position: 1745627-1744326 (Counterclockwise)
Preceding gene: 119715876
Following gene: 119715874
Centisome position: 35.01
GC content: 70.74
Gene sequence:
>1302_bases ATGGTCGAGTGTCAGACTCGCCACATGAGCGTCGACGTCTCGGACCTGCTGCGCCGCTACGACCAGGTACGCACCTACAC CGAGCGGCTGTCCGCACCGCTCTCCCCCGAGGACCAGACCGTCCAGTCGATGCCGGACGTCTCGCCCACCAAGTGGCACC GCGCGCACGTGACGTGGTTCTTCGAGACCTTCGTGCTCGCCGACAACGAGCCCGGCTTCACCCCGTTCCAGGACACGTAC TGGTTCCTGTTCAACAGCTACTACGAGGCGGTCGGCCCCCGCCACAGCCGGCCGATGCGCGGGGTGATCAGCCGCCCCGG CGCCCACGACGTGGGCGTCTACCGGTCCAACGTGGACAACCGGATCCACGACCTCCTGGACCGGCTCGACGAGGGCGCCA TCGCGAAGCTGCTGCCGACCATCGAGCTCGGGTTCCACCACGAGCAGCAGCACCAAGAGCTGCTGCTGATGGACATCAAG CACGTGCTGTCGCTCAACCCGCTCCGACCCGTCTACGCGGGGCGGCCTCCGGTCGCCGCGGACCCGACGCCGCTGGGTTG GCGGGAGTACGACGGCGGGCTGGTCGAGCTGGGCCACGAGGGCGGCGGCTTCTGCTTCGACAACGAGCTGCCCCGCCACC AGCAGTACCTGCCGCCCTTCCGGATGGGCGATCGGCTGGTCACCAACGGCGAATGGTCGGACTTCATCGCCGACGGCGGC TACCAGCGGCCCGAGCTCTGGCTCTCCGACGGCTGGGCACGCGTCACCGCCGAGGGCTGGGGTGCGCCCTTCTACTGGAG CCAGGTCGACGGGGTCTGGCTCGAGCACACGCTGCACGGCACCTTCCCCGTCGACCCCGCACTGCCGGTGTGCCACGTCA GCCACTACGAGGCCGACGCCTACGCGGCCTGGGCCGGCAAGCGCCTCCCGACCGAGGCCGAGTGGGAGCACGCCGCCACC CTCGAGGACGCTGGGCCGGCCGAGCGGCCTGCGAACCTGTCCGACACCGAGTCCTGGCACCCCCGCTCGGCCGGGCCGCC GACCGGTGGCCTTCGACAGCTGTTCGGCGACTGCTGGGAATGGACATCCTCGGCCTACCTGCCGTACCCGGGCTTCCACC CCGCCGCCGGCGCCATCGGCGAGTACAACGGCAAGTTCATGTCCGGCCAGATGGTCCTGCGCGGCGGCTGCGCACTGACC CCGCCGGGACATGCCCGCGCTACCTACCGGAACTTCTTCCCCGCCGGAGCCCGCTGGCCGGTGACCGGTGTCCGGCTGGC CGACGACCTGGGCCGCCAGTGA
Upstream 100 bases:
>100_bases CACCCGACGGGGTGAGGTGATCAATGTCGGTGGGCAGTGAGGCACGCGACGCTCACGGCACGCCAGGCCGTCTCTGTAAG CCAGCACACTGTCCGGCCTC
Downstream 100 bases:
>100_bases TCTTCTCGGCAACCGCGTGTGCCGACCGACCGGCCTCAGGCCGCGGGACGACCCCCGCCCACGTTCGGCCCGCACCCTAC CTGGAGGACGCATGACTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MVECQTRHMSVDVSDLLRRYDQVRTYTERLSAPLSPEDQTVQSMPDVSPTKWHRAHVTWFFETFVLADNEPGFTPFQDTY WFLFNSYYEAVGPRHSRPMRGVISRPGAHDVGVYRSNVDNRIHDLLDRLDEGAIAKLLPTIELGFHHEQQHQELLLMDIK HVLSLNPLRPVYAGRPPVAADPTPLGWREYDGGLVELGHEGGGFCFDNELPRHQQYLPPFRMGDRLVTNGEWSDFIADGG YQRPELWLSDGWARVTAEGWGAPFYWSQVDGVWLEHTLHGTFPVDPALPVCHVSHYEADAYAAWAGKRLPTEAEWEHAAT LEDAGPAERPANLSDTESWHPRSAGPPTGGLRQLFGDCWEWTSSAYLPYPGFHPAAGAIGEYNGKFMSGQMVLRGGCALT PPGHARATYRNFFPAGARWPVTGVRLADDLGRQ
Sequences:
>Translated_433_residues MVECQTRHMSVDVSDLLRRYDQVRTYTERLSAPLSPEDQTVQSMPDVSPTKWHRAHVTWFFETFVLADNEPGFTPFQDTY WFLFNSYYEAVGPRHSRPMRGVISRPGAHDVGVYRSNVDNRIHDLLDRLDEGAIAKLLPTIELGFHHEQQHQELLLMDIK HVLSLNPLRPVYAGRPPVAADPTPLGWREYDGGLVELGHEGGGFCFDNELPRHQQYLPPFRMGDRLVTNGEWSDFIADGG YQRPELWLSDGWARVTAEGWGAPFYWSQVDGVWLEHTLHGTFPVDPALPVCHVSHYEADAYAAWAGKRLPTEAEWEHAAT LEDAGPAERPANLSDTESWHPRSAGPPTGGLRQLFGDCWEWTSSAYLPYPGFHPAAGAIGEYNGKFMSGQMVLRGGCALT PPGHARATYRNFFPAGARWPVTGVRLADDLGRQ >Mature_433_residues MVECQTRHMSVDVSDLLRRYDQVRTYTERLSAPLSPEDQTVQSMPDVSPTKWHRAHVTWFFETFVLADNEPGFTPFQDTY WFLFNSYYEAVGPRHSRPMRGVISRPGAHDVGVYRSNVDNRIHDLLDRLDEGAIAKLLPTIELGFHHEQQHQELLLMDIK HVLSLNPLRPVYAGRPPVAADPTPLGWREYDGGLVELGHEGGGFCFDNELPRHQQYLPPFRMGDRLVTNGEWSDFIADGG YQRPELWLSDGWARVTAEGWGAPFYWSQVDGVWLEHTLHGTFPVDPALPVCHVSHYEADAYAAWAGKRLPTEAEWEHAAT LEDAGPAERPANLSDTESWHPRSAGPPTGGLRQLFGDCWEWTSSAYLPYPGFHPAAGAIGEYNGKFMSGQMVLRGGCALT PPGHARATYRNFFPAGARWPVTGVRLADDLGRQ
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48729; Mature: 48729
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVECQTRHMSVDVSDLLRRYDQVRTYTERLSAPLSPEDQTVQSMPDVSPTKWHRAHVTWF CCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHEEEEE FETFVLADNEPGFTPFQDTYWFLFNSYYEAVGPRHSRPMRGVISRPGAHDVGVYRSNVDN EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHH RIHDLLDRLDEGAIAKLLPTIELGFHHEQQHQELLLMDIKHVLSLNPLRPVYAGRPPVAA HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC DPTPLGWREYDGGLVELGHEGGGFCFDNELPRHQQYLPPFRMGDRLVTNGEWSDFIADGG CCCCCCCCCCCCCEEEECCCCCCEEECCCCCCHHHCCCCHHCCCEEEECCCCHHHHHCCC YQRPELWLSDGWARVTAEGWGAPFYWSQVDGVWLEHTLHGTFPVDPALPVCHVSHYEADA CCCCEEEECCCEEEEEECCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCH YAAWAGKRLPTEAEWEHAATLEDAGPAERPANLSDTESWHPRSAGPPTGGLRQLFGDCWE HHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH WTSSAYLPYPGFHPAAGAIGEYNGKFMSGQMVLRGGCALTPPGHARATYRNFFPAGARWP HHCCCCCCCCCCCCCCCCCCCCCCEEEECEEEEECCEECCCCCCCHHHHHHCCCCCCCCC VTGVRLADDLGRQ CCCEEHHHHHCCC >Mature Secondary Structure MVECQTRHMSVDVSDLLRRYDQVRTYTERLSAPLSPEDQTVQSMPDVSPTKWHRAHVTWF CCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHEEEEE FETFVLADNEPGFTPFQDTYWFLFNSYYEAVGPRHSRPMRGVISRPGAHDVGVYRSNVDN EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHH RIHDLLDRLDEGAIAKLLPTIELGFHHEQQHQELLLMDIKHVLSLNPLRPVYAGRPPVAA HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC DPTPLGWREYDGGLVELGHEGGGFCFDNELPRHQQYLPPFRMGDRLVTNGEWSDFIADGG CCCCCCCCCCCCCEEEECCCCCCEEECCCCCCHHHCCCCHHCCCEEEECCCCHHHHHCCC YQRPELWLSDGWARVTAEGWGAPFYWSQVDGVWLEHTLHGTFPVDPALPVCHVSHYEADA CCCCEEEECCCEEEEEECCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCH YAAWAGKRLPTEAEWEHAATLEDAGPAERPANLSDTESWHPRSAGPPTGGLRQLFGDCWE HHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH WTSSAYLPYPGFHPAAGAIGEYNGKFMSGQMVLRGGCALTPPGHARATYRNFFPAGARWP HHCCCCCCCCCCCCCCCCCCCCCCEEEECEEEEECCEECCCCCCCHHHHHHCCCCCCCCC VTGVRLADDLGRQ CCCEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA