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The map label for this gene is ybfF [C]

Identifier: 119715840

GI number: 119715840

Start: 1703236

End: 1704081

Strand: Reverse

Name: ybfF [C]

Synonym: Noca_1604

Alternate gene names: 119715840

Gene position: 1704081-1703236 (Counterclockwise)

Preceding gene: 119715841

Following gene: 119715839

Centisome position: 34.18

GC content: 69.62

Gene sequence:

>846_bases
ATGCCTGTGATCTCGCGCCGGAGGCGGCGGAACGAGTGTGCGGTGAACCTTCGTGCCGAAGCCGTTCAGGCTCCCTCGGC
GTCAGGTGGTCCGGGGAGTGAGCTGGTCGTGGTGCCGACCTACGACGAGGCCGAGAACATCGGGTCGCTGATCGACGGTG
TGCTCGCTTCAACCTCGGCCGATGTGCTGGTGGTGGACGACAGCAGCCCCGACGGCACGGCTGGCATCGTCCGGGCGCAC
CCGGCCTTCGGGGATCGGGTGCACGTGCTGGACCGGCCGGCGAAGGCGGGTCTGGGGCCGGCGTACCGGGCTGGCTTTCG
GTGGGCGTTGAGCCGTGGGTACGCAGCGGTCGTGCAGATGGACGCCGATTTCTCTCACCCGCCCGAGCGGATCCCGGCAC
TCCTGAAGGGGCTCGCCCACTTCGATGTCGTGGTGGGCTCGCGCTATGTGCCCGGCGGCGCGGTCCGGAACTGGCCGGTA
TTACGTCGGCTGATCTCCCGCGGCGGCAACCTGTACGTCCGCGTTGTACTGGACCTGCCGGTTCGTGACGCGACGGCCGG
GTTCAAGGCCTTCCGGTCCGAGGCGCTGGCCAGGATCGGTGCGGTGAGCTCGGAGTCCAACGGCTACTGCTTCCAGGTCG
AGAACACCTGGCGTGCGGTGGGTCAGGGTCTGCGGGTCGGCGAGGTCCCGATCACGTTCGTGGACCGTGCCCGGGGGGCG
TCGAAGATGTCGGCCCGCATCGTCCTCGAGGCCATGGTCAGGGTGCTGCTCTGGCGTGTCCGGGATTACCGGGGCGGCCG
GGACACGCGCCGTGGGCAGGTGCCGCATGCGGTGGCAGGGCGATGA

Upstream 100 bases:

>100_bases
ATTGCCGCGTCTCAACCCGCACGCCCAGCGATGATCGGTCACACGAGCAGCATCCCGGTTGTTCAGGCTGGGTTCAGCAA
CGGCCTCTGATCATGAGCGC

Downstream 100 bases:

>100_bases
CGGGTCGAGGTGGCGTCCGGTCTGGCCGGCTGCGCAGACTCGGGGGATCGATCGGGCGGGTGAGCGTAGCGGCTCTGCTG
GTTGCGGGGTGCGCGGGAAA

Product: dolichyl-phosphate beta-D-mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MPVISRRRRRNECAVNLRAEAVQAPSASGGPGSELVVVPTYDEAENIGSLIDGVLASTSADVLVVDDSSPDGTAGIVRAH
PAFGDRVHVLDRPAKAGLGPAYRAGFRWALSRGYAAVVQMDADFSHPPERIPALLKGLAHFDVVVGSRYVPGGAVRNWPV
LRRLISRGGNLYVRVVLDLPVRDATAGFKAFRSEALARIGAVSSESNGYCFQVENTWRAVGQGLRVGEVPITFVDRARGA
SKMSARIVLEAMVRVLLWRVRDYRGGRDTRRGQVPHAVAGR

Sequences:

>Translated_281_residues
MPVISRRRRRNECAVNLRAEAVQAPSASGGPGSELVVVPTYDEAENIGSLIDGVLASTSADVLVVDDSSPDGTAGIVRAH
PAFGDRVHVLDRPAKAGLGPAYRAGFRWALSRGYAAVVQMDADFSHPPERIPALLKGLAHFDVVVGSRYVPGGAVRNWPV
LRRLISRGGNLYVRVVLDLPVRDATAGFKAFRSEALARIGAVSSESNGYCFQVENTWRAVGQGLRVGEVPITFVDRARGA
SKMSARIVLEAMVRVLLWRVRDYRGGRDTRRGQVPHAVAGR
>Mature_280_residues
PVISRRRRRNECAVNLRAEAVQAPSASGGPGSELVVVPTYDEAENIGSLIDGVLASTSADVLVVDDSSPDGTAGIVRAHP
AFGDRVHVLDRPAKAGLGPAYRAGFRWALSRGYAAVVQMDADFSHPPERIPALLKGLAHFDVVVGSRYVPGGAVRNWPVL
RRLISRGGNLYVRVVLDLPVRDATAGFKAFRSEALARIGAVSSESNGYCFQVENTWRAVGQGLRVGEVPITFVDRARGAS
KMSARIVLEAMVRVLLWRVRDYRGGRDTRRGQVPHAVAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=217, Percent_Identity=36.405529953917, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI71999402, Length=223, Percent_Identity=39.9103139013453, Blast_Score=157, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6325441, Length=230, Percent_Identity=30.4347826086957, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24585265, Length=230, Percent_Identity=35.6521739130435, Blast_Score=133, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30301; Mature: 30170

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVISRRRRRNECAVNLRAEAVQAPSASGGPGSELVVVPTYDEAENIGSLIDGVLASTSA
CCCCHHHHCCCHHEEEEEHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
DVLVVDDSSPDGTAGIVRAHPAFGDRVHVLDRPAKAGLGPAYRAGFRWALSRGYAAVVQM
CEEEEECCCCCCCEEEEEECCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHCCEEEEEEE
DADFSHPPERIPALLKGLAHFDVVVGSRYVPGGAVRNWPVLRRLISRGGNLYVRVVLDLP
CCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECC
VRDATAGFKAFRSEALARIGAVSSESNGYCFQVENTWRAVGQGLRVGEVPITFVDRARGA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCEECCCCEEEHHHCCCC
SKMSARIVLEAMVRVLLWRVRDYRGGRDTRRGQVPHAVAGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PVISRRRRRNECAVNLRAEAVQAPSASGGPGSELVVVPTYDEAENIGSLIDGVLASTSA
CCCHHHHCCCHHEEEEEHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
DVLVVDDSSPDGTAGIVRAHPAFGDRVHVLDRPAKAGLGPAYRAGFRWALSRGYAAVVQM
CEEEEECCCCCCCEEEEEECCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHCCEEEEEEE
DADFSHPPERIPALLKGLAHFDVVVGSRYVPGGAVRNWPVLRRLISRGGNLYVRVVLDLP
CCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECC
VRDATAGFKAFRSEALARIGAVSSESNGYCFQVENTWRAVGQGLRVGEVPITFVDRARGA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCEECCCCEEEHHHCCCC
SKMSARIVLEAMVRVLLWRVRDYRGGRDTRRGQVPHAVAGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]