| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is mrr [H]
Identifier: 119715822
GI number: 119715822
Start: 1684674
End: 1685588
Strand: Reverse
Name: mrr [H]
Synonym: Noca_1586
Alternate gene names: 119715822
Gene position: 1685588-1684674 (Counterclockwise)
Preceding gene: 119715826
Following gene: 119715821
Centisome position: 33.81
GC content: 66.34
Gene sequence:
>915_bases GTGGCCATCCCTGACTACCAGAGTCTGATGCGGCCGGTGCTGGAGACCCTGGCCGATGGCCGCGTGCGCGCCATGCGCGA CCTGACCGAGGAGCTTTCCGACCGGCTCTCGCTCAGCGACGACGACCGCCGTCAGACGATCACCTCGGGCATGAGCCTCG TCGCCAACCGGGTCCATTGGTCGGTGACCTACCTGTTCAAAGCACGGGCCGTCGACCGGCCGCAGCGCGGCCGCGTACAG ATCACTGAGCGAGGGCAGGCCCTTCTGGCGACGCCCGGCGAGATCCGGAACTCGACCCTGGAGCAGTTCGCGGAGTACCG CGAGTTCTACGACAAGTACCGAAGCAAGAAGGCCGCCCGATCTTCCTCGGCCGAGCAGCCCTCCTCAGCAGCCGAAGACG AGTCACCCGACGACCTGATCGCACGGGCCGAGGCGGACGCCCGTGTCGTACTCGCCAGCGAACTGCTGGAGAAGGTCCGC TCCATCGAGGCCACGGCCTTCGAGCGCCTGGTCCTCAAGCTGCTCGAAGCCATGGGCTACGGCGGGCTCGGTCTGATGCG GCACACCGGCAGGACGGGCGACGGCGGCGTCGACGGGGTAATCGAGGAAGACAAGCTCGGCCTCAACCGGATCTATGTCC AAGCCAAGCGCTACGGCGCCGGGAACACAGTCGGGTCCGAGGAGATGCGGAACTTCCTTGGGGCCATGTCGGGCAAGGTT GACCGGGGCGTGTTCCTGACGACCAGCACCTTCACGCCGGCCGCCACACGAGAGCTTGACGGACGCGGGGTCCGGGTCGT TCTGATCAACGGCGAGGAGCTCGTCGACCTGATGATCGACCACGGCGTCGGCGTCGAGGCGATCAAGGTTGCCACGATCA ACCGGATCAACGAGGACTTCTTTGAGGGGCTCTGA
Upstream 100 bases:
>100_bases GCCTCGGTCATCTGGCTCACGCGGGCGATTCTCGCAGGACGGGCCGACGGTTTCCGCCGAACACTCGGGAACCGTCGGAT CCGACTGCCATCATGCGGGG
Downstream 100 bases:
>100_bases CCGAGTGTTGAACTACGCGTCGGCGACGCACGACGAAGAGCAGCGCGACCTCCGGCAGCGCCGGACTGGAGAGTTCTTCC GGCGGATCCAATCTGTGGGC
Product: restriction endonuclease
Products: NA
Alternate protein names: EcoKMrr [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAIPDYQSLMRPVLETLADGRVRAMRDLTEELSDRLSLSDDDRRQTITSGMSLVANRVHWSVTYLFKARAVDRPQRGRVQ ITERGQALLATPGEIRNSTLEQFAEYREFYDKYRSKKAARSSSAEQPSSAAEDESPDDLIARAEADARVVLASELLEKVR SIEATAFERLVLKLLEAMGYGGLGLMRHTGRTGDGGVDGVIEEDKLGLNRIYVQAKRYGAGNTVGSEEMRNFLGAMSGKV DRGVFLTTSTFTPAATRELDGRGVRVVLINGEELVDLMIDHGVGVEAIKVATINRINEDFFEGL
Sequences:
>Translated_304_residues MAIPDYQSLMRPVLETLADGRVRAMRDLTEELSDRLSLSDDDRRQTITSGMSLVANRVHWSVTYLFKARAVDRPQRGRVQ ITERGQALLATPGEIRNSTLEQFAEYREFYDKYRSKKAARSSSAEQPSSAAEDESPDDLIARAEADARVVLASELLEKVR SIEATAFERLVLKLLEAMGYGGLGLMRHTGRTGDGGVDGVIEEDKLGLNRIYVQAKRYGAGNTVGSEEMRNFLGAMSGKV DRGVFLTTSTFTPAATRELDGRGVRVVLINGEELVDLMIDHGVGVEAIKVATINRINEDFFEGL >Mature_303_residues AIPDYQSLMRPVLETLADGRVRAMRDLTEELSDRLSLSDDDRRQTITSGMSLVANRVHWSVTYLFKARAVDRPQRGRVQI TERGQALLATPGEIRNSTLEQFAEYREFYDKYRSKKAARSSSAEQPSSAAEDESPDDLIARAEADARVVLASELLEKVRS IEATAFERLVLKLLEAMGYGGLGLMRHTGRTGDGGVDGVIEEDKLGLNRIYVQAKRYGAGNTVGSEEMRNFLGAMSGKVD RGVFLTTSTFTPAATRELDGRGVRVVLINGEELVDLMIDHGVGVEAIKVATINRINEDFFEGL
Specific function: Involved in the acceptance of foreign DNA which is modified. Restricts both adenine- and cytosine-methylated DNA [H]
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790811, Length=308, Percent_Identity=36.3636363636364, Blast_Score=137, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011856 - InterPro: IPR011335 - InterPro: IPR007560 [H]
Pfam domain/function: PF04471 Mrr_cat [H]
EC number: NA
Molecular weight: Translated: 33592; Mature: 33461
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPDYQSLMRPVLETLADGRVRAMRDLTEELSDRLSLSDDDRRQTITSGMSLVANRVHW CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH SVTYLFKARAVDRPQRGRVQITERGQALLATPGEIRNSTLEQFAEYREFYDKYRSKKAAR HHHHHHHHHHCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSSAEQPSSAAEDESPDDLIARAEADARVVLASELLEKVRSIEATAFERLVLKLLEAMGY CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGLGLMRHTGRTGDGGVDGVIEEDKLGLNRIYVQAKRYGAGNTVGSEEMRNFLGAMSGKV CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHEEEHHHCCCCCCCCHHHHHHHHHHHCCCC DRGVFLTTSTFTPAATRELDGRGVRVVLINGEELVDLMIDHGVGVEAIKVATINRINEDF CCCEEEEECCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCHHEEHHHHHHHHHHH FEGL HCCC >Mature Secondary Structure AIPDYQSLMRPVLETLADGRVRAMRDLTEELSDRLSLSDDDRRQTITSGMSLVANRVHW CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH SVTYLFKARAVDRPQRGRVQITERGQALLATPGEIRNSTLEQFAEYREFYDKYRSKKAAR HHHHHHHHHHCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSSAEQPSSAAEDESPDDLIARAEADARVVLASELLEKVRSIEATAFERLVLKLLEAMGY CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGLGLMRHTGRTGDGGVDGVIEEDKLGLNRIYVQAKRYGAGNTVGSEEMRNFLGAMSGKV CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHEEEHHHCCCCCCCCHHHHHHHHHHHCCCC DRGVFLTTSTFTPAATRELDGRGVRVVLINGEELVDLMIDHGVGVEAIKVATINRINEDF CCCEEEEECCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCHHEEHHHHHHHHHHH FEGL HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650347; 7610040; 9278503 [H]