Click here to switch to the map view.

The map label for this gene is 119715818

Identifier: 119715818

GI number: 119715818

Start: 1679672

End: 1681123

Strand: Reverse

Name: 119715818

Synonym: Noca_1582

Alternate gene names: NA

Gene position: 1681123-1679672 (Counterclockwise)

Preceding gene: 119715821

Following gene: 119715817

Centisome position: 33.72

GC content: 71.42

Gene sequence:

>1452_bases
ATGAGCGACTCGCAGTTCGTCCGCCTGGACCCCAGCAAGATCAAGATCGGCGCGAACGTCCGCACCGACCTGCACGCCGA
CGCCAAGGAGTTCGCCCGCTCGATCAAGGAGCGCGGCGTTCTGGAGCCGGTGACGGTGTACGCCGACGAGGACGGCGCGT
ACGTCGTCCTGCGCGGCCAGCGACGTACCGTCGTCGCCGCCGAGGTCGGCCTGACCGACATCCCGGCGCAGGTCGTGCCG
AAGCCCGACGAGGCTGACCGGATCACCGACCAGATGGTCGAGAACCTGCACCGCGCCGCCATGCGCGACAGCGAGATCGT
CGGCGGTGTCGAGCAACTCGCGCTCGTCGGCGTGAGCGCCGCGCAGATCGCCAAGCGCGCGGCCCTGCCCCGCAACCGCG
TGAACGCGGCGCTGGCGATCGTCGACAAGGAGCAGACCCGCGCTCGTGTCGTCTCCGGTGACCTGACGCTCGACGAGGCT
GCCATCTTCGCCGAGTTCGAGCACGACGCCGAGGCGGTCGAGCGACTCGAGCGCGCCATGCAGTTCAGCCGCCCCCTCTC
CCACGTGGCCCAGCGACTCCGCGACGAGGCCGCCGAGCGCGCCGCCCTCCTGGCCGAGGTCGACCGGCTCCGGGCCGAGG
GCCTCCCCGTGCTCGACCCGGACGAGGTCCGGGACGCCCGCGGGCTTCGGCTGGACGACCACGTCCGAGCCGCCGACGGC
GAGGCGATCGCCGAGGACGACTGGCCGACCGTGCCGGGAGCGGCGGTCGTGGTCGTCGCTGAGTGGGAGTACCCCGACAA
CGAGACCACCGACGGGGACGACGAGTCGGACGACGAGCCGGTGCAGGTGTTCAAGCCGACGTGGATCTGTCGTGATCCGG
CGGCGGCTGGACTCGTCCAGCGCTGGAACTACCGGACCGGAACCCACAAGACCGGCGATGGCGAGGCCGACGAGGAGGAA
GCCGCCGAAGCGGCCCGCGAGGAACGTCGGCGCGTCATCGCCAACAACAAGGCGTGGGCCAGCGCCGAGGTCGTACGCCG
CGACTGGCTGCGGCAGTTCCTCGCCCGCAAGACCGCGCCGCAGGGAGCCGAGGCGCTGATCTGTGAGGCGGTCGTGGGCG
GGCAGTTCACCCTCACCAAGGCCATGGACTCAGCCCACCCGATGCTGCGCGAACTGCTCGGCCTCGACACCGCCAGCGTG
TACGGCGGAGGTCGTCAGGCAGCCGAGCACCTGGCCGAGCAGGCAGCCACCCCCAAGGCCGCGACGATGACCACCCTCGC
CGCCGTCGTAACCGCGTGGGAGTCGAGCACCGGCAAGCACACGTGGCGCAACCCGAGCCGTTGGGATGCCCGCGTCCTCG
GAGCCCTCTCCACGTGGGGCTATCAGCCGAGCGAGGTCGAAGGCCTCCTGCTCGCCACCCAACCGACCGACGACCAGCCG
GTCGCCGTCTGA

Upstream 100 bases:

>100_bases
TTCCGGGGCGTCTCTCCACAGCCCCGGCGCCCACAGCAGCGGGGAGCCCCAACCGGCTCGCAGTCTGCCCCTGACCGCTC
AACCAACCGAAGGAGACACG

Downstream 100 bases:

>100_bases
GCACGAAGGAGCCAAGACCATGGCACACCAGATCGAGACATACGGCAGCGAGGCCGCTGCCATCTTCGCCCGCACCGACG
CGTGGCACCGGCTCGGGACC

Product: nuclease

Products: NA

Alternate protein names: Partitioning Protein ParB Family; Plasmid Partitioning Protein ParB; ParB Family Partitioning Protein; ParB Family Protein; Chromosome Partitioning Protein; ParB-Like Partition Protein; Chromosome Partitioning Protein-Like Protein

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSDSQFVRLDPSKIKIGANVRTDLHADAKEFARSIKERGVLEPVTVYADEDGAYVVLRGQRRTVVAAEVGLTDIPAQVVP
KPDEADRITDQMVENLHRAAMRDSEIVGGVEQLALVGVSAAQIAKRAALPRNRVNAALAIVDKEQTRARVVSGDLTLDEA
AIFAEFEHDAEAVERLERAMQFSRPLSHVAQRLRDEAAERAALLAEVDRLRAEGLPVLDPDEVRDARGLRLDDHVRAADG
EAIAEDDWPTVPGAAVVVVAEWEYPDNETTDGDDESDDEPVQVFKPTWICRDPAAAGLVQRWNYRTGTHKTGDGEADEEE
AAEAAREERRRVIANNKAWASAEVVRRDWLRQFLARKTAPQGAEALICEAVVGGQFTLTKAMDSAHPMLRELLGLDTASV
YGGGRQAAEHLAEQAATPKAATMTTLAAVVTAWESSTGKHTWRNPSRWDARVLGALSTWGYQPSEVEGLLLATQPTDDQP
VAV

Sequences:

>Translated_483_residues
MSDSQFVRLDPSKIKIGANVRTDLHADAKEFARSIKERGVLEPVTVYADEDGAYVVLRGQRRTVVAAEVGLTDIPAQVVP
KPDEADRITDQMVENLHRAAMRDSEIVGGVEQLALVGVSAAQIAKRAALPRNRVNAALAIVDKEQTRARVVSGDLTLDEA
AIFAEFEHDAEAVERLERAMQFSRPLSHVAQRLRDEAAERAALLAEVDRLRAEGLPVLDPDEVRDARGLRLDDHVRAADG
EAIAEDDWPTVPGAAVVVVAEWEYPDNETTDGDDESDDEPVQVFKPTWICRDPAAAGLVQRWNYRTGTHKTGDGEADEEE
AAEAAREERRRVIANNKAWASAEVVRRDWLRQFLARKTAPQGAEALICEAVVGGQFTLTKAMDSAHPMLRELLGLDTASV
YGGGRQAAEHLAEQAATPKAATMTTLAAVVTAWESSTGKHTWRNPSRWDARVLGALSTWGYQPSEVEGLLLATQPTDDQP
VAV
>Mature_482_residues
SDSQFVRLDPSKIKIGANVRTDLHADAKEFARSIKERGVLEPVTVYADEDGAYVVLRGQRRTVVAAEVGLTDIPAQVVPK
PDEADRITDQMVENLHRAAMRDSEIVGGVEQLALVGVSAAQIAKRAALPRNRVNAALAIVDKEQTRARVVSGDLTLDEAA
IFAEFEHDAEAVERLERAMQFSRPLSHVAQRLRDEAAERAALLAEVDRLRAEGLPVLDPDEVRDARGLRLDDHVRAADGE
AIAEDDWPTVPGAAVVVVAEWEYPDNETTDGDDESDDEPVQVFKPTWICRDPAAAGLVQRWNYRTGTHKTGDGEADEEEA
AEAAREERRRVIANNKAWASAEVVRRDWLRQFLARKTAPQGAEALICEAVVGGQFTLTKAMDSAHPMLRELLGLDTASVY
GGGRQAAEHLAEQAATPKAATMTTLAAVVTAWESSTGKHTWRNPSRWDARVLGALSTWGYQPSEVEGLLLATQPTDDQPV
AV

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52745; Mature: 52614

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSQFVRLDPSKIKIGANVRTDLHADAKEFARSIKERGVLEPVTVYADEDGAYVVLRGQ
CCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECC
RRTVVAAEVGLTDIPAQVVPKPDEADRITDQMVENLHRAAMRDSEIVGGVEQLALVGVSA
CCEEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCHH
AQIAKRAALPRNRVNAALAIVDKEQTRARVVSGDLTLDEAAIFAEFEHDAEAVERLERAM
HHHHHHHCCCHHHCCEEEEEEECHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
QFSRPLSHVAQRLRDEAAERAALLAEVDRLRAEGLPVLDPDEVRDARGLRLDDHVRAADG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCC
EAIAEDDWPTVPGAAVVVVAEWEYPDNETTDGDDESDDEPVQVFKPTWICRDPAAAGLVQ
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEECCHHHHHHHH
RWNYRTGTHKTGDGEADEEEAAEAAREERRRVIANNKAWASAEVVRRDWLRQFLARKTAP
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
QGAEALICEAVVGGQFTLTKAMDSAHPMLRELLGLDTASVYGGGRQAAEHLAEQAATPKA
CCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCH
ATMTTLAAVVTAWESSTGKHTWRNPSRWDARVLGALSTWGYQPSEVEGLLLATQPTDDQP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
VAV
CCC
>Mature Secondary Structure 
SDSQFVRLDPSKIKIGANVRTDLHADAKEFARSIKERGVLEPVTVYADEDGAYVVLRGQ
CCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECC
RRTVVAAEVGLTDIPAQVVPKPDEADRITDQMVENLHRAAMRDSEIVGGVEQLALVGVSA
CCEEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCHH
AQIAKRAALPRNRVNAALAIVDKEQTRARVVSGDLTLDEAAIFAEFEHDAEAVERLERAM
HHHHHHHCCCHHHCCEEEEEEECHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
QFSRPLSHVAQRLRDEAAERAALLAEVDRLRAEGLPVLDPDEVRDARGLRLDDHVRAADG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCC
EAIAEDDWPTVPGAAVVVVAEWEYPDNETTDGDDESDDEPVQVFKPTWICRDPAAAGLVQ
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEECCHHHHHHHH
RWNYRTGTHKTGDGEADEEEAAEAAREERRRVIANNKAWASAEVVRRDWLRQFLARKTAP
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
QGAEALICEAVVGGQFTLTKAMDSAHPMLRELLGLDTASVYGGGRQAAEHLAEQAATPKA
CCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCH
ATMTTLAAVVTAWESSTGKHTWRNPSRWDARVLGALSTWGYQPSEVEGLLLATQPTDDQP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
VAV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA