| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715765
Identifier: 119715765
GI number: 119715765
Start: 1621699
End: 1622307
Strand: Direct
Name: 119715765
Synonym: Noca_1529
Alternate gene names: NA
Gene position: 1621699-1622307 (Clockwise)
Preceding gene: 119715764
Following gene: 119715766
Centisome position: 32.53
GC content: 74.22
Gene sequence:
>609_bases GTGACGGACTTCGACCCCGAGTTCAGCAAGGACCTCACGAACGACCTGGACGCCGACCCCGCCCTCGCCTCGGCGGTCCT CGAGATCGAGAGCCACATCGCCGCCGACGGCTGGGACCAGCCGGCCCGGCTCTACGCGCTGGTCGACACCGCCGCGCTCG TCGAGCGGGAGCCGGCGCTGGCCGCCGCCATGGGCCTGGACGCGGCCTCGGCGCAGGGCTCGCTGACGCCGATCGAGCAG GACCAGCTCCGCCCCGACCAGCCGCTCGAGGTCGCCCTCGAGTCGATCGTGTGGCCGCCCGAGGTCACCGGTTGCGCGGC GGTCGTGGAGCGGCTGGTGCTGCCACCGGACGCGGACCCCCTCATCCCGGCGGACCCGGCCTCGGCGGAGGAGTTCGCGC GCGAGCACCCCGACCGCCAGGACGTGCGCATCGTCGCGGGTGTCACGCGCGCGGGAGCGACGTACTGTGCGTTGCGACTG CGCGCTCACGACGACGACCAGTCCGTCGTCGGCGGCGCCGACCTCGTGCCGGGGTTGCTGCAGCTGCTCGGGGTGACGTT GGAGGATCCCGGGGACGGCCCCGGGGACGGCCCGGGTACTAAGGAGTGA
Upstream 100 bases:
>100_bases GGCTGGTGCGCGCCGACACGATGCACGACGCCCGCGTGGCCATCGCCGCCTGGGTCAAGGACCACGACGCGGACCTGCCG AGCTGCGAGGAGAGCCAGAA
Downstream 100 bases:
>100_bases AGCAGGGATGAGCGAGCTGTTCGACGAGGCCCCTCGGGACCCCGGACCCCCGGCGCGGTCCGGTTCGCGCCGGTCCCGTG CCCTGATCGTCACGGCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTDFDPEFSKDLTNDLDADPALASAVLEIESHIAADGWDQPARLYALVDTAALVEREPALAAAMGLDAASAQGSLTPIEQ DQLRPDQPLEVALESIVWPPEVTGCAAVVERLVLPPDADPLIPADPASAEEFAREHPDRQDVRIVAGVTRAGATYCALRL RAHDDDQSVVGGADLVPGLLQLLGVTLEDPGDGPGDGPGTKE
Sequences:
>Translated_202_residues MTDFDPEFSKDLTNDLDADPALASAVLEIESHIAADGWDQPARLYALVDTAALVEREPALAAAMGLDAASAQGSLTPIEQ DQLRPDQPLEVALESIVWPPEVTGCAAVVERLVLPPDADPLIPADPASAEEFAREHPDRQDVRIVAGVTRAGATYCALRL RAHDDDQSVVGGADLVPGLLQLLGVTLEDPGDGPGDGPGTKE >Mature_201_residues TDFDPEFSKDLTNDLDADPALASAVLEIESHIAADGWDQPARLYALVDTAALVEREPALAAAMGLDAASAQGSLTPIEQD QLRPDQPLEVALESIVWPPEVTGCAAVVERLVLPPDADPLIPADPASAEEFAREHPDRQDVRIVAGVTRAGATYCALRLR AHDDDQSVVGGADLVPGLLQLLGVTLEDPGDGPGDGPGTKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21187; Mature: 21055
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFDPEFSKDLTNDLDADPALASAVLEIESHIAADGWDQPARLYALVDTAALVEREPAL CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHH AAAMGLDAASAQGSLTPIEQDQLRPDQPLEVALESIVWPPEVTGCAAVVERLVLPPDADP HHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC LIPADPASAEEFAREHPDRQDVRIVAGVTRAGATYCALRLRAHDDDQSVVGGADLVPGLL CCCCCCCCHHHHHHHCCCCCCEEEEEHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHH QLLGVTLEDPGDGPGDGPGTKE HHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDFDPEFSKDLTNDLDADPALASAVLEIESHIAADGWDQPARLYALVDTAALVEREPAL CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHH AAAMGLDAASAQGSLTPIEQDQLRPDQPLEVALESIVWPPEVTGCAAVVERLVLPPDADP HHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC LIPADPASAEEFAREHPDRQDVRIVAGVTRAGATYCALRLRAHDDDQSVVGGADLVPGLL CCCCCCCCHHHHHHHCCCCCCEEEEEHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHH QLLGVTLEDPGDGPGDGPGTKE HHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA