Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715743

Identifier: 119715743

GI number: 119715743

Start: 1598244

End: 1598819

Strand: Reverse

Name: 119715743

Synonym: Noca_1507

Alternate gene names: NA

Gene position: 1598819-1598244 (Counterclockwise)

Preceding gene: 119715748

Following gene: 119715742

Centisome position: 32.07

GC content: 73.96

Gene sequence:

>576_bases
GTGGCGATCCTGGCCTTCGACGACATGGAGGTGCTCGACTACGCCGGCCCGTACGAGGTGTTCAACGTCGCCGGCGAGCT
GGGCGAGGGCGCGCCGTTCTCGGTGTTCTCGGTCGGCCTGACCGGCGCCCCGGCCGTCGGGCGGGGCGGGTTCACCGTCC
TGCCGGCGTACTCCCTCGACGACGCGCCGCCGCCCGACCTGCTCGTGGTGCCCGGCGGCGCGGGCACCCGGCCGCTCCTG
CATGACGAGCGGCTGCTCGCGTGGGTGCGCGAGCGCGCGGCCGAGGTCGAGCTGCTGCTGTCGGTGTGCACCGGGGCGCT
GCTGCTCGGCGCGGCGGGGCTGCTGGAGCGGCGGCCGGCGACCACGCACCACGATGCGTACGACGAGCTCGCGGCGCTCT
CCCCCACCACCCAGGTCGTGCGCGGCCAGCGGTTCGTGCGCAGCACCGAGACGATCCTCACCTCGGCCGGTGTCTCCGCC
GGTGTCGACCTCTCGCTGCACGCCGTGCAGCTGCTGGCCGGCCAGGTCACCCGCGACCTCGTCGTAAGCGAGATGGAGTG
GATGTGGCAATCGTGA

Upstream 100 bases:

>100_bases
GGCGGTACGTCGTCGCGGTGGTCGGCATGTGGCCATTCGACCATCCGCCGCCGACAGCGTCCGTCAACGGCCCGACAATG
GGCCGGTGAGTCAGCGAACC

Downstream 100 bases:

>100_bases
CTGGCCCGGCCCGGGGCCGGTTGTCACCTCTGGCCGTAGGCGTTCCCACGGGCGGTCGATAGCGTCCTGCCATGACTGAA
GGCCCCCTCTCCGACCTGGT

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; AraC Family Transcription Regulator; AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; Transcriptional Regulator; DJ-1/PfpI Family Protein; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; AraC/XylS Family Transcriptional Regulator; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLDDAPPPDLLVVPGGAGTRPLL
HDERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPATTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSA
GVDLSLHAVQLLAGQVTRDLVVSEMEWMWQS

Sequences:

>Translated_191_residues
MAILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLDDAPPPDLLVVPGGAGTRPLL
HDERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPATTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSA
GVDLSLHAVQLLAGQVTRDLVVSEMEWMWQS
>Mature_190_residues
AILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLDDAPPPDLLVVPGGAGTRPLLH
DERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPATTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSAG
VDLSLHAVQLLAGQVTRDLVVSEMEWMWQS

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20212; Mature: 20081

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLD
CEEEEECCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCC
DAPPPDLLVVPGGAGTRPLLHDERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPA
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSAGVDLSLHAVQLLAGQVTRDL
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VVSEMEWMWQS
HHHHHHHHHCC
>Mature Secondary Structure 
AILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLD
EEEEECCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCC
DAPPPDLLVVPGGAGTRPLLHDERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPA
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSAGVDLSLHAVQLLAGQVTRDL
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VVSEMEWMWQS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA