| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715737
Identifier: 119715737
GI number: 119715737
Start: 1592425
End: 1592826
Strand: Direct
Name: 119715737
Synonym: Noca_1501
Alternate gene names: NA
Gene position: 1592425-1592826 (Clockwise)
Preceding gene: 119715735
Following gene: 119715738
Centisome position: 31.94
GC content: 76.12
Gene sequence:
>402_bases ATGCGCCCTCCGCTCGCCGAGACGCTCGACCTCCAGCCGCATCCCGAGGGCGGCTGGTACCGCCAGACCTGGTCCGCCCC GGAGACCGTGACCCTCCCGGACGGCCGGGTGCGGCCGACGGCGACGCTGATCTACTTCCTGCTGCCGGCGGGGGAGTCGT CCGCGTGGCACCGGGTCGCGTCCGACGAGCTGTGGCTCGCGCACCGGGGCGCGGTGGCCCTCGAGCTCGGCGGCGTCGGG CCGGCGCCGGTGCTGGAGTCGACGGCGGTGGTCGACGTCGAGCGCCCGCAGGCCCTGGTGCCCGCCGGGACCTGGCAGCG GACCGTCCCCGCGGAGGCGGACGCGCTCGTCAGCTGCCTGGTCTCCCCGGGCTTCGACTTCGACGACTTCGAGCTGGCGT GA
Upstream 100 bases:
>100_bases TTCCTCTACGGTCCCGAGCCGGGTCGACATCTCGGGTCGAGAGTAGTGGCCGTCGCGCCGCTGTGAACCGCGTTCGCCAG GCACGCGGCAGGATGGTCGC
Downstream 100 bases:
>100_bases CCGCGGCGCCGACCCCGGTCACGCTGATCACCGGCGGCACCCGCGGGATCGGCGCGGCCACGGCGCTCCGGCTCGCCAGG GACGGCCACGACCTGGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRPPLAETLDLQPHPEGGWYRQTWSAPETVTLPDGRVRPTATLIYFLLPAGESSAWHRVASDELWLAHRGAVALELGGVG PAPVLESTAVVDVERPQALVPAGTWQRTVPAEADALVSCLVSPGFDFDDFELA
Sequences:
>Translated_133_residues MRPPLAETLDLQPHPEGGWYRQTWSAPETVTLPDGRVRPTATLIYFLLPAGESSAWHRVASDELWLAHRGAVALELGGVG PAPVLESTAVVDVERPQALVPAGTWQRTVPAEADALVSCLVSPGFDFDDFELA >Mature_133_residues MRPPLAETLDLQPHPEGGWYRQTWSAPETVTLPDGRVRPTATLIYFLLPAGESSAWHRVASDELWLAHRGAVALELGGVG PAPVLESTAVVDVERPQALVPAGTWQRTVPAEADALVSCLVSPGFDFDDFELA
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14354; Mature: 14354
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPPLAETLDLQPHPEGGWYRQTWSAPETVTLPDGRVRPTATLIYFLLPAGESSAWHRVA CCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCEECC SDELWLAHRGAVALELGGVGPAPVLESTAVVDVERPQALVPAGTWQRTVPAEADALVSCL CCCEEEEECCEEEEEECCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHH VSPGFDFDDFELA HCCCCCCCCCCCC >Mature Secondary Structure MRPPLAETLDLQPHPEGGWYRQTWSAPETVTLPDGRVRPTATLIYFLLPAGESSAWHRVA CCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCEECC SDELWLAHRGAVALELGGVGPAPVLESTAVVDVERPQALVPAGTWQRTVPAEADALVSCL CCCEEEEECCEEEEEECCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHH VSPGFDFDDFELA HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA