| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715736
Identifier: 119715736
GI number: 119715736
Start: 1591621
End: 1592316
Strand: Reverse
Name: 119715736
Synonym: Noca_1500
Alternate gene names: NA
Gene position: 1592316-1591621 (Counterclockwise)
Preceding gene: 119715742
Following gene: 119715722
Centisome position: 31.94
GC content: 68.39
Gene sequence:
>696_bases ATGCAATCCGAAGTCATGTACAGCCCCGCCTACGCGACCGCCAAGCTCACCCTCGCCGCCGGCGAGGCCGTCCGCGCCGA GTCCGGCGCGATGCTCGCGATGTCGCCCGGCATCGCGATGGAGACCTCGACGCAGGGCGGGGTGCTGAAGGGCCTCAAGC GCTCGGTCCTCGGCGGCGAGTCCTTCTTCATGAACACCTTCACCGCACAGGTCGACGGCGCCGAGCTGTACGTCGCGCCC GCGCTGCCCGGCGACGTCGTCGCGTGGCCGCTCAACGGCGTGCTCTACGTGCAGTCCGGGTCGTTCCTGGCCGCCTCGTC GAACATCCAGGTCGACACCAAATGGGGCGGCGGCAAGACGTTCTTCTCCAGCGAGGGCCTGTTCATGCTGCGCATCGAGG GCCAGGGCGAGCTGGTGCTGTCCAGCTACGGCGCGATCCACGCGATCGACCTGCAGGCCGGCCAGACCTACACGGTCGAC ACCGGCCACATGGTCGCCTGGACCGACGGCGTCCAGTACAACGTGCGCAAGGTCGGCAACTGGAAGTCGACGTTCTTCTC CGGCGAGGGCCTGGTCTGCGACCTCACCGGTCCCGGCCGGATCTACCTCCAGACCCGCAGCCAGGACGCCTTCCTCGGCT GGTTGGTGCCGAAGCTGCCCACCCAGAAGAGCGGCGGGGACAGCCTGTTCTCCTGA
Upstream 100 bases:
>100_bases CCTGCCGCGTGCCTGGCGAACGCGGTTCACAGCGGCGCGACGGCCACTACTCTCGACCCGAGATGTCGACCCGGCTCGGG ACCGTAGAGGAAGTAGACCG
Downstream 100 bases:
>100_bases CGGCTCCCGGGTCGTGTGCCTGAGAACGCGCTATGGCGCGTGCTCAGGCACACGACCCACCCAGGCTGCGGGGCACACTC AGACGCGTCCGAGCAGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MQSEVMYSPAYATAKLTLAAGEAVRAESGAMLAMSPGIAMETSTQGGVLKGLKRSVLGGESFFMNTFTAQVDGAELYVAP ALPGDVVAWPLNGVLYVQSGSFLAASSNIQVDTKWGGGKTFFSSEGLFMLRIEGQGELVLSSYGAIHAIDLQAGQTYTVD TGHMVAWTDGVQYNVRKVGNWKSTFFSGEGLVCDLTGPGRIYLQTRSQDAFLGWLVPKLPTQKSGGDSLFS
Sequences:
>Translated_231_residues MQSEVMYSPAYATAKLTLAAGEAVRAESGAMLAMSPGIAMETSTQGGVLKGLKRSVLGGESFFMNTFTAQVDGAELYVAP ALPGDVVAWPLNGVLYVQSGSFLAASSNIQVDTKWGGGKTFFSSEGLFMLRIEGQGELVLSSYGAIHAIDLQAGQTYTVD TGHMVAWTDGVQYNVRKVGNWKSTFFSGEGLVCDLTGPGRIYLQTRSQDAFLGWLVPKLPTQKSGGDSLFS >Mature_231_residues MQSEVMYSPAYATAKLTLAAGEAVRAESGAMLAMSPGIAMETSTQGGVLKGLKRSVLGGESFFMNTFTAQVDGAELYVAP ALPGDVVAWPLNGVLYVQSGSFLAASSNIQVDTKWGGGKTFFSSEGLFMLRIEGQGELVLSSYGAIHAIDLQAGQTYTVD TGHMVAWTDGVQYNVRKVGNWKSTFFSGEGLVCDLTGPGRIYLQTRSQDAFLGWLVPKLPTQKSGGDSLFS
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 24490; Mature: 24490
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSEVMYSPAYATAKLTLAAGEAVRAESGAMLAMSPGIAMETSTQGGVLKGLKRSVLGGE CCCCEEECCCCEEEEEEEECCCEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCC SFFMNTFTAQVDGAELYVAPALPGDVVAWPLNGVLYVQSGSFLAASSNIQVDTKWGGGKT EEEEEEEEEEECCCEEEEECCCCCCEEEECCCCEEEEECCCEEEECCCEEEEEECCCCEE FFSSEGLFMLRIEGQGELVLSSYGAIHAIDLQAGQTYTVDTGHMVAWTDGVQYNVRKVGN EEECCCEEEEEECCCCCEEEECCCCEEEEEECCCCEEEEECCCEEEEECCCEEEEEECCC WKSTFFSGEGLVCDLTGPGRIYLQTRSQDAFLGWLVPKLPTQKSGGDSLFS CCCEEECCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MQSEVMYSPAYATAKLTLAAGEAVRAESGAMLAMSPGIAMETSTQGGVLKGLKRSVLGGE CCCCEEECCCCEEEEEEEECCCEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCC SFFMNTFTAQVDGAELYVAPALPGDVVAWPLNGVLYVQSGSFLAASSNIQVDTKWGGGKT EEEEEEEEEEECCCEEEEECCCCCCEEEECCCCEEEEECCCEEEECCCEEEEEECCCCEE FFSSEGLFMLRIEGQGELVLSSYGAIHAIDLQAGQTYTVDTGHMVAWTDGVQYNVRKVGN EEECCCEEEEEECCCCCEEEECCCCEEEEEECCCCEEEEECCCEEEEECCCEEEEEECCC WKSTFFSGEGLVCDLTGPGRIYLQTRSQDAFLGWLVPKLPTQKSGGDSLFS CCCEEECCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA