| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is soj [H]
Identifier: 119715703
GI number: 119715703
Start: 1555086
End: 1555910
Strand: Direct
Name: soj [H]
Synonym: Noca_1467
Alternate gene names: 119715703
Gene position: 1555086-1555910 (Clockwise)
Preceding gene: 119715701
Following gene: 119715704
Centisome position: 31.19
GC content: 70.91
Gene sequence:
>825_bases ATGAGCACGACACTCGCGATCGCCAACCAGAAGGGCGGCGTCGCCAAGACGACGACGGTCGCGTCGGTGGGGGCCGCCCT TGCGGAGCTGGGCCATTCGGTCCTGCTCGTCGACCTCGACCCGCAGGCCTGCCTGACCTTCTCCCTGGGCATCGACCCGG AGGACCTCGAGCTCTCGGTCCACCACGTGCTGACCAAGGGCCTGGACCCGGCCGAGGTGATCATCGAGACCGAGGACGGT GTGGACCTGGTGCCCGCCACCATCGAGCTGGCCCGCGCTGAGGCCGAGCTGCTCACCCGGACCGGCCGGGAGCACGTGCT GCGGTCGATGATCGAGGCGCTGGCCGACGCCGAGGTCGACTACGACTGGATCCTGCTCGACTGCCCGCCGTCCCTCGGCG TCCTGACCGTCGCGGCGCTCACCGCCGCGGACGGGGTGCTGGTGCCGCTGCAGTGCGAGACGCTGTCGCACCGGGGCGTG GGGCAGCTGCTCGACACGGTCCACGATGTACGCCGCTTCACCAACCGGGGTCTCGAGGTCTGGGGCGTGCTGCCGACCCT GTACGACGGCCGCACCAACCACTCGCGCACGGTGCTCGAGACCATCTCCGAGACCTACGACCTCGAGGTCGTCGAGCCGC CGATCCCGAAGACGATCAAGTTCGCGGAGGCGCCGGCGGCCGGACGCTCCATCCTCGCGACCAGCCGCAGCAGCAAGGGC GCCCAGGCCTACCGGGACGTGGCCGAGAGCCTCGTCGCCCGGTCCCAGCGGCCCAAGGCCAAGAAGGGATCCGGCAAGGA CCGTCCGGGGAAGGCCGGCAAGTGA
Upstream 100 bases:
>100_bases TCCGACGAACAACGGCGCGGGGACCCCGCATGAGCACCCCACGACGTTCTTCGTCTCCACCGCTCCGCTCCTCCGACGAA CAACGGCGCGGGGACCCCGC
Downstream 100 bases:
>100_bases GCCGCCACCGCGGCGCCCCGGTCCGGCCCCGCTACGGCCGGCTCGCGGCGCTCGGGTCCTCGCTCTCCGTGACCGTGATC GCGGTGCTCGGCGGCACCGG
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSTTLAIANQKGGVAKTTTVASVGAALAELGHSVLLVDLDPQACLTFSLGIDPEDLELSVHHVLTKGLDPAEVIIETEDG VDLVPATIELARAEAELLTRTGREHVLRSMIEALADAEVDYDWILLDCPPSLGVLTVAALTAADGVLVPLQCETLSHRGV GQLLDTVHDVRRFTNRGLEVWGVLPTLYDGRTNHSRTVLETISETYDLEVVEPPIPKTIKFAEAPAAGRSILATSRSSKG AQAYRDVAESLVARSQRPKAKKGSGKDRPGKAGK
Sequences:
>Translated_274_residues MSTTLAIANQKGGVAKTTTVASVGAALAELGHSVLLVDLDPQACLTFSLGIDPEDLELSVHHVLTKGLDPAEVIIETEDG VDLVPATIELARAEAELLTRTGREHVLRSMIEALADAEVDYDWILLDCPPSLGVLTVAALTAADGVLVPLQCETLSHRGV GQLLDTVHDVRRFTNRGLEVWGVLPTLYDGRTNHSRTVLETISETYDLEVVEPPIPKTIKFAEAPAAGRSILATSRSSKG AQAYRDVAESLVARSQRPKAKKGSGKDRPGKAGK >Mature_273_residues STTLAIANQKGGVAKTTTVASVGAALAELGHSVLLVDLDPQACLTFSLGIDPEDLELSVHHVLTKGLDPAEVIIETEDGV DLVPATIELARAEAELLTRTGREHVLRSMIEALADAEVDYDWILLDCPPSLGVLTVAALTAADGVLVPLQCETLSHRGVG QLLDTVHDVRRFTNRGLEVWGVLPTLYDGRTNHSRTVLETISETYDLEVVEPPIPKTIKFAEAPAAGRSILATSRSSKGA QAYRDVAESLVARSQRPKAKKGSGKDRPGKAGK
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29169; Mature: 29037
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLAIANQKGGVAKTTTVASVGAALAELGHSVLLVDLDPQACLTFSLGIDPEDLELSV CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCHHHHHH HHVLTKGLDPAEVIIETEDGVDLVPATIELARAEAELLTRTGREHVLRSMIEALADAEVD HHHHHCCCCHHHEEEECCCCCEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC YDWILLDCPPSLGVLTVAALTAADGVLVPLQCETLSHRGVGQLLDTVHDVRRFTNRGLEV CCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEE WGVLPTLYDGRTNHSRTVLETISETYDLEVVEPPIPKTIKFAEAPAAGRSILATSRSSKG EEECHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEECCCCCCCCEEEEECCCCCH AQAYRDVAESLVARSQRPKAKKGSGKDRPGKAGK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STTLAIANQKGGVAKTTTVASVGAALAELGHSVLLVDLDPQACLTFSLGIDPEDLELSV CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCHHHHHH HHVLTKGLDPAEVIIETEDGVDLVPATIELARAEAELLTRTGREHVLRSMIEALADAEVD HHHHHCCCCHHHEEEECCCCCEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC YDWILLDCPPSLGVLTVAALTAADGVLVPLQCETLSHRGVGQLLDTVHDVRRFTNRGLEV CCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEE WGVLPTLYDGRTNHSRTVLETISETYDLEVVEPPIPKTIKFAEAPAAGRSILATSRSSKG EEECHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEECCCCCCCCEEEEECCCCCH AQAYRDVAESLVARSQRPKAKKGSGKDRPGKAGK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]