| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715687
Identifier: 119715687
GI number: 119715687
Start: 1538342
End: 1539913
Strand: Direct
Name: 119715687
Synonym: Noca_1451
Alternate gene names: NA
Gene position: 1538342-1539913 (Clockwise)
Preceding gene: 119715686
Following gene: 119715688
Centisome position: 30.85
GC content: 74.24
Gene sequence:
>1572_bases GTGAGGAGCCCGCTGTCCCGGCTCGGCCGGGTGTCCTCCGTCTCCGTCGACGCGGACGGCATCACCGCCCGCAGCCGGCG GGAGGTCGTCCTGGACGTCTCCTTCGACGGGCGGCGCATCTACTCGTTCTGGCTGCACCGCGACGGCACCCGCGCCGGCG CGCCCGGCACCTGGCAGGTCCCGTGGCCCGGCAGCCTGCACCGCTTCCTCTCCGGCACCACCCGCCTGACGCTTGCCGTC CACGAGAGCCAGGAGGTCGTGTTCGACCAGGAGGTGACCCTCGGGGACGGCTCCGGGCGGATCGCGGTCGTCAACACCGC GGGGCAGCCGCTGAGCCTGGACAAGTCGCTGCGCCTCGTCCAGACGTTCGACAGCCGCAGCGAGGAGAACGTCCGGCCGC TCCTCGACGCCATCGACCACGTGCTCGCCGGCCTCGAGCAGGCCGGGATCCACGCGTTCCTCGCGTACGGGACGCTCCTC GGCGCGGTCCGCGACGGACGTCTGATCGGTCACGACAGCGACGCCGACCTCGGCTACGTGAGCGAGCACGAGCACCCCGT CGACGCGATCAGGGAGTCCTTCCGGGTCCAGCGGGCGCTCACGCAGGCGGGCTACCGGATCACCCGCTACTCCGCGCTGG CCTTCAAGGTCGACGTCGTGGAGAGCGACGGGGTGGTGCGCGGGCTGGATGTGTTCGGCGGGTTCATGCGTGACGGCTAC CTGCACCTGATGGGGGAGATCCGGACCCCGTTCAAGCGCTCCTGGGTCACGCCGCTGGGCACCGCCACGCTCGAGGGCCG CTCGTTCCCGGTGCCGGCGGACACCGACCGTTTCCTGACCGCGACCTATGGCCGGTCCTGGCGGGTCCCGGACCCGGCGT TCCACTTCGCCACCCCGCGCTCGACGCACCGCCGCTTCGACGGCTGGTTCCGTGGGATCCGGGTGCGCCGCCCGCTCTGG GACCGCGTCTACTCCCGGCGCCGCGCGCCCTCGGGCACGCCGTCCGGCCTGGCCCGCTGGGTCGCGGAGCGCGAGGACCC GGCCCTGCCGGTGGTCGACCTGGGCTGCGGCACCGGCAGCGACGCGCTCTGGCTGGCGCGCCGCGGGACGCCGGTCACCG GGCTCGACTTCGTACGGCGCGGGTTCGAGCGCGCCGAGGAGGAGGCGGTGGCCGAGGGCCTGGACGCCCGCTTCCTGGTC TGCAACCTGCTCGAGCTCCGCTCGGTGCTCGCGACCGGGGCGCTGGTCGCCGCGGACCGGGGGCCCCGCGTCGTGATCGC CCGCCACCTGGCCGACCACCTCGGCGCCGGAGCCCGCAGGCACGCCTGGACCGCCGCCCGGATGATGCTCCACGACGGTG GCCGGCTGTACCTGGAGTTCCTGGTCCAGCGCGGCGACGGCCGGCTCGCCCGGCAGCAGCGGGCCCGGGTCCGCAAGCCG CGGGCGGTGGCTCGGGAGCTGCGGGCCCTGGGTGCCACAATCGTCGAGCGCGAGACAGTACGAATCCCGAGGAGCGACCG CGACGGCGGCTCGCCCGCCAAGACCTGCCGGATGGTGGCCACATGGCAATGA
Upstream 100 bases:
>100_bases CGGGCCTAGCTTCCCGGCCCGGCTGGATGTGGGCGAGCGCGGCCCGCGGGATACGATCACGCGTCCCCACGTACCGTCGA CCCGCAGGAGCCTGCCGCCC
Downstream 100 bases:
>100_bases AGGGTTGGGCAGTGAAGGACCGGATGAGGAACGTCGCCGGGCGGTTCCGGGCACCGGCGACGTACGACCTGCGGCAGCGG GTGGTGGCGCTCGAGGCCGA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: LicD Family Protein; Coagulation Factor 5/8 Type-Like
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MRSPLSRLGRVSSVSVDADGITARSRREVVLDVSFDGRRIYSFWLHRDGTRAGAPGTWQVPWPGSLHRFLSGTTRLTLAV HESQEVVFDQEVTLGDGSGRIAVVNTAGQPLSLDKSLRLVQTFDSRSEENVRPLLDAIDHVLAGLEQAGIHAFLAYGTLL GAVRDGRLIGHDSDADLGYVSEHEHPVDAIRESFRVQRALTQAGYRITRYSALAFKVDVVESDGVVRGLDVFGGFMRDGY LHLMGEIRTPFKRSWVTPLGTATLEGRSFPVPADTDRFLTATYGRSWRVPDPAFHFATPRSTHRRFDGWFRGIRVRRPLW DRVYSRRRAPSGTPSGLARWVAEREDPALPVVDLGCGTGSDALWLARRGTPVTGLDFVRRGFERAEEEAVAEGLDARFLV CNLLELRSVLATGALVAADRGPRVVIARHLADHLGAGARRHAWTAARMMLHDGGRLYLEFLVQRGDGRLARQQRARVRKP RAVARELRALGATIVERETVRIPRSDRDGGSPAKTCRMVATWQ
Sequences:
>Translated_523_residues MRSPLSRLGRVSSVSVDADGITARSRREVVLDVSFDGRRIYSFWLHRDGTRAGAPGTWQVPWPGSLHRFLSGTTRLTLAV HESQEVVFDQEVTLGDGSGRIAVVNTAGQPLSLDKSLRLVQTFDSRSEENVRPLLDAIDHVLAGLEQAGIHAFLAYGTLL GAVRDGRLIGHDSDADLGYVSEHEHPVDAIRESFRVQRALTQAGYRITRYSALAFKVDVVESDGVVRGLDVFGGFMRDGY LHLMGEIRTPFKRSWVTPLGTATLEGRSFPVPADTDRFLTATYGRSWRVPDPAFHFATPRSTHRRFDGWFRGIRVRRPLW DRVYSRRRAPSGTPSGLARWVAEREDPALPVVDLGCGTGSDALWLARRGTPVTGLDFVRRGFERAEEEAVAEGLDARFLV CNLLELRSVLATGALVAADRGPRVVIARHLADHLGAGARRHAWTAARMMLHDGGRLYLEFLVQRGDGRLARQQRARVRKP RAVARELRALGATIVERETVRIPRSDRDGGSPAKTCRMVATWQ >Mature_523_residues MRSPLSRLGRVSSVSVDADGITARSRREVVLDVSFDGRRIYSFWLHRDGTRAGAPGTWQVPWPGSLHRFLSGTTRLTLAV HESQEVVFDQEVTLGDGSGRIAVVNTAGQPLSLDKSLRLVQTFDSRSEENVRPLLDAIDHVLAGLEQAGIHAFLAYGTLL GAVRDGRLIGHDSDADLGYVSEHEHPVDAIRESFRVQRALTQAGYRITRYSALAFKVDVVESDGVVRGLDVFGGFMRDGY LHLMGEIRTPFKRSWVTPLGTATLEGRSFPVPADTDRFLTATYGRSWRVPDPAFHFATPRSTHRRFDGWFRGIRVRRPLW DRVYSRRRAPSGTPSGLARWVAEREDPALPVVDLGCGTGSDALWLARRGTPVTGLDFVRRGFERAEEEAVAEGLDARFLV CNLLELRSVLATGALVAADRGPRVVIARHLADHLGAGARRHAWTAARMMLHDGGRLYLEFLVQRGDGRLARQQRARVRKP RAVARELRALGATIVERETVRIPRSDRDGGSPAKTCRMVATWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58073; Mature: 58073
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPLSRLGRVSSVSVDADGITARSRREVVLDVSFDGRRIYSFWLHRDGTRAGAPGTWQV CCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEC PWPGSLHRFLSGTTRLTLAVHESQEVVFDQEVTLGDGSGRIAVVNTAGQPLSLDKSLRLV CCCHHHHHHHCCCEEEEEEEECCCCEEEECEEEEECCCCCEEEEECCCCCCCCHHHHHHH QTFDSRSEENVRPLLDAIDHVLAGLEQAGIHAFLAYGTLLGAVRDGRLIGHDSDADLGYV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC SEHEHPVDAIRESFRVQRALTQAGYRITRYSALAFKVDVVESDGVVRGLDVFGGFMRDGY CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCEEEHHHHHHHHHCCH LHLMGEIRTPFKRSWVTPLGTATLEGRSFPVPADTDRFLTATYGRSWRVPDPAFHFATPR HHHHHHHCCCHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCC STHRRFDGWFRGIRVRRPLWDRVYSRRRAPSGTPSGLARWVAEREDPALPVVDLGCGTGS HHHHHHHHHHHCCEECCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC DALWLARRGTPVTGLDFVRRGFERAEEEAVAEGLDARFLVCNLLELRSVLATGALVAADR CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCC GPRVVIARHLADHLGAGARRHAWTAARMMLHDGGRLYLEFLVQRGDGRLARQQRARVRKP CCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCH RAVARELRALGATIVERETVRIPRSDRDGGSPAKTCRMVATWQ HHHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHEEEEEECC >Mature Secondary Structure MRSPLSRLGRVSSVSVDADGITARSRREVVLDVSFDGRRIYSFWLHRDGTRAGAPGTWQV CCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEC PWPGSLHRFLSGTTRLTLAVHESQEVVFDQEVTLGDGSGRIAVVNTAGQPLSLDKSLRLV CCCHHHHHHHCCCEEEEEEEECCCCEEEECEEEEECCCCCEEEEECCCCCCCCHHHHHHH QTFDSRSEENVRPLLDAIDHVLAGLEQAGIHAFLAYGTLLGAVRDGRLIGHDSDADLGYV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC SEHEHPVDAIRESFRVQRALTQAGYRITRYSALAFKVDVVESDGVVRGLDVFGGFMRDGY CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCEEEHHHHHHHHHCCH LHLMGEIRTPFKRSWVTPLGTATLEGRSFPVPADTDRFLTATYGRSWRVPDPAFHFATPR HHHHHHHCCCHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCC STHRRFDGWFRGIRVRRPLWDRVYSRRRAPSGTPSGLARWVAEREDPALPVVDLGCGTGS HHHHHHHHHHHCCEECCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC DALWLARRGTPVTGLDFVRRGFERAEEEAVAEGLDARFLVCNLLELRSVLATGALVAADR CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCC GPRVVIARHLADHLGAGARRHAWTAARMMLHDGGRLYLEFLVQRGDGRLARQQRARVRKP CCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCH RAVARELRALGATIVERETVRIPRSDRDGGSPAKTCRMVATWQ HHHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA