| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715684
Identifier: 119715684
GI number: 119715684
Start: 1534663
End: 1535781
Strand: Direct
Name: 119715684
Synonym: Noca_1448
Alternate gene names: NA
Gene position: 1534663-1535781 (Clockwise)
Preceding gene: 119715679
Following gene: 119715685
Centisome position: 30.78
GC content: 76.59
Gene sequence:
>1119_bases GTGCCGACTCCAGCACCGCGCATCGTCATCCATGTCGGGCTGCCCAAGACCGGTACGACCTACCTCCAGGGCCTGCTCGC GGGCCAGCGCGATCGCCTGCTCGCCGGCGGGGTCGGCTACCCGCTGGTGCGGCCCGGTGCCATGTTCCACGGCGCCGTCG AGGTCCGCGGCAGCCACGCCAAGTTCGGCCTGGTGGCCGGTGAGGTCGCGGGGACCTGGGCGGCGCTGTGCGAGCGCGCC CGCGCCTTCGACGGTACGACGGTCCTCGGCCACGAGGTGCTGGCCGGTGCGACGATCGCGCAGATCCGGGCCGCGCTCGC GCCGCTGGCCGGCCACGAGGTGCACGTGGTGGTCACCGCGCGCGACCTCGGCCGCCAGGCGACCGCGCACTGGCAGGAGG AGGTGAAGCTCGGCGCGACCTGGTCCTTCGCCGAGTTCGAGCGCGACCAGCTGCGCGCCGACACCGGTCCCGACGCGGGG CCGGACGCGGGCGGGGCCCGACCGCACTTCTGGCACGCCCAGGACTTCGCGGACTGCCTGCGCCGCTGGGGGTCGGCGGT CGGAGCCGACCGGGCGCACCTGGTGCTCGGGCCGCCTCCGGGAGCGCCCCCCGAGGAGCTCTGGCGCCGGTTCGCCGAGG CAGTGGGGATCGACCCGGCACTGGTTGACGCCGCCGTACCACCCGCGAACCCCTCGCTGGGGGCCGCGGAGGTCGCCCTG CTGCGGGCGGTGAACGCGGAGCTCGCCGGCCGGCTGGACCCGCACACGTACAACCGGGTCGTGAAGCGCGGCTACGCCGA GGGCCGGCTCGCCGGCCGGCCGGGCCCGCGACCGCGGACCCCGCACGAGCTGGCCGGGCTGCTCACCGAGGCGACGCAGC GGTGGGTCGCGCAGGTCGCCGCGGCCGGCCATCCGGTGCACGGCGACCTCGCCGACCTCGCGCCGGTGACCGCCCCGGAA GGGAGCCCGCACCCCGACGACGTCGCGCTCCCCGAGGACCCGGTCGCTGTCGCTCAGGTTCTGTTGGCCGAGGCCGATAA GAGGACCGGGTCGACGTCCGCGTCCGGTCCACAGGGCGGTCGGTGGCCGCGCCTGATCGGTCGTCGCCGGCGGGGTTGA
Upstream 100 bases:
>100_bases GAAGATCGGCAGCCCGACCAGGCGGGCCGCGTAGACGCGGACGGGGGTGGTGCTCACAGGGACGAACGCTACCGGCCGGA GCGGGTGGCACGATGTCACC
Downstream 100 bases:
>100_bases GAGGCGCTCGTTCGGGTAGAGTCAGCACAGCCAGTCAGGCGGCGAACCGGCAGCGACCGGTGTGGAAGAGGGATCGCGAG GCATGTCCAAGCACGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MPTPAPRIVIHVGLPKTGTTYLQGLLAGQRDRLLAGGVGYPLVRPGAMFHGAVEVRGSHAKFGLVAGEVAGTWAALCERA RAFDGTTVLGHEVLAGATIAQIRAALAPLAGHEVHVVVTARDLGRQATAHWQEEVKLGATWSFAEFERDQLRADTGPDAG PDAGGARPHFWHAQDFADCLRRWGSAVGADRAHLVLGPPPGAPPEELWRRFAEAVGIDPALVDAAVPPANPSLGAAEVAL LRAVNAELAGRLDPHTYNRVVKRGYAEGRLAGRPGPRPRTPHELAGLLTEATQRWVAQVAAAGHPVHGDLADLAPVTAPE GSPHPDDVALPEDPVAVAQVLLAEADKRTGSTSASGPQGGRWPRLIGRRRRG
Sequences:
>Translated_372_residues MPTPAPRIVIHVGLPKTGTTYLQGLLAGQRDRLLAGGVGYPLVRPGAMFHGAVEVRGSHAKFGLVAGEVAGTWAALCERA RAFDGTTVLGHEVLAGATIAQIRAALAPLAGHEVHVVVTARDLGRQATAHWQEEVKLGATWSFAEFERDQLRADTGPDAG PDAGGARPHFWHAQDFADCLRRWGSAVGADRAHLVLGPPPGAPPEELWRRFAEAVGIDPALVDAAVPPANPSLGAAEVAL LRAVNAELAGRLDPHTYNRVVKRGYAEGRLAGRPGPRPRTPHELAGLLTEATQRWVAQVAAAGHPVHGDLADLAPVTAPE GSPHPDDVALPEDPVAVAQVLLAEADKRTGSTSASGPQGGRWPRLIGRRRRG >Mature_371_residues PTPAPRIVIHVGLPKTGTTYLQGLLAGQRDRLLAGGVGYPLVRPGAMFHGAVEVRGSHAKFGLVAGEVAGTWAALCERAR AFDGTTVLGHEVLAGATIAQIRAALAPLAGHEVHVVVTARDLGRQATAHWQEEVKLGATWSFAEFERDQLRADTGPDAGP DAGGARPHFWHAQDFADCLRRWGSAVGADRAHLVLGPPPGAPPEELWRRFAEAVGIDPALVDAAVPPANPSLGAAEVALL RAVNAELAGRLDPHTYNRVVKRGYAEGRLAGRPGPRPRTPHELAGLLTEATQRWVAQVAAAGHPVHGDLADLAPVTAPEG SPHPDDVALPEDPVAVAQVLLAEADKRTGSTSASGPQGGRWPRLIGRRRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39072; Mature: 38940
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPAPRIVIHVGLPKTGTTYLQGLLAGQRDRLLAGGVGYPLVRPGAMFHGAVEVRGSHA CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHCCEEEECCCCC KFGLVAGEVAGTWAALCERARAFDGTTVLGHEVLAGATIAQIRAALAPLAGHEVHVVVTA EEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC RDLGRQATAHWQEEVKLGATWSFAEFERDQLRADTGPDAGPDAGGARPHFWHAQDFADCL HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH RRWGSAVGADRAHLVLGPPPGAPPEELWRRFAEAVGIDPALVDAAVPPANPSLGAAEVAL HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHH LRAVNAELAGRLDPHTYNRVVKRGYAEGRLAGRPGPRPRTPHELAGLLTEATQRWVAQVA HHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAGHPVHGDLADLAPVTAPEGSPHPDDVALPEDPVAVAQVLLAEADKRTGSTSASGPQGG HCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC RWPRLIGRRRRG CCHHHHHHCCCC >Mature Secondary Structure PTPAPRIVIHVGLPKTGTTYLQGLLAGQRDRLLAGGVGYPLVRPGAMFHGAVEVRGSHA CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHCCEEEECCCCC KFGLVAGEVAGTWAALCERARAFDGTTVLGHEVLAGATIAQIRAALAPLAGHEVHVVVTA EEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC RDLGRQATAHWQEEVKLGATWSFAEFERDQLRADTGPDAGPDAGGARPHFWHAQDFADCL HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH RRWGSAVGADRAHLVLGPPPGAPPEELWRRFAEAVGIDPALVDAAVPPANPSLGAAEVAL HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHH LRAVNAELAGRLDPHTYNRVVKRGYAEGRLAGRPGPRPRTPHELAGLLTEATQRWVAQVA HHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAGHPVHGDLADLAPVTAPEGSPHPDDVALPEDPVAVAQVLLAEADKRTGSTSASGPQGG HCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC RWPRLIGRRRRG CCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA