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The map label for this gene is ycaQ [H]

Identifier: 119715675

GI number: 119715675

Start: 1525163

End: 1526362

Strand: Direct

Name: ycaQ [H]

Synonym: Noca_1439

Alternate gene names: 119715675

Gene position: 1525163-1526362 (Clockwise)

Preceding gene: 119715674

Following gene: 119715676

Centisome position: 30.59

GC content: 72.75

Gene sequence:

>1200_bases
GTGGAGTCGTTGAGCAACGCGCAGGCGCGCCGCGTGGCGCTCGCCGCGCAGGGCTTCCTCGACCCGCGCCACACCATCCC
GACGATGCGCACCTTCCAGCGCACCCTGGAGCGCACCGGAGTGCTCCAGGTCGACTCGGTCAACGTGCTGCAGCGGGCGC
ACTACATGCCGGTGTTCTCCCGGATCGGCCGGTACGACGTCGAGCTGCTGCGGCGCGCGGCAGAGCGCCGGCCCCGGCGG
ATGGTGGAGTACTGGGCGCACGTGCAGGCGTACATGCCGGTCGAACTCTGGCCGGTCATGCAGCACCGGATGGCGGCGTA
CCGTCAGAAGCGGGGCAAGTGGGGGTTCGTCGTGGGTGACGACGGCCTCGAGCAGAGCCTGTTGGAGGAGATCCGCGAGC
GCGGCGCCTCGACCGCCCGGGACCTCGACGACGGGCTGCCCCGCGACAAGACCCACTGGGGCTGGAACTGGTCCGAGACG
CGCAAGGTCCTCGACTACCTCTACATGTCGGGCGCCGTGGCGATCGCCGATCGCAACACCCAGTTCGAGATCCGCTACGA
CCTGCCCGAGCGGGTCCTGCCGGCCGAGGTGCTCGCGCAGCCGACTCCCTCGCTCGACGACGCCAACCGTGAGCTCATCC
GCCGGGCAGCCCGGTCCCACGGGGTGGCGAGCGTCCAGGACCTGCGCGACTACTACCGCATGGAGGTCGCGCCCGCCGCT
CGGGCCGTCGCCGAGCTGGTCGAGGAGGGTGAGCTGCTGCCGGTCGCCGTCGAGGGGTGGCGGCGCCCGGCCTACCTGCA
CCGCGACGCCCGGCTGCCGCGGCGGGTCCGGGCCCGGGCGCTGCTGAGCCCGTTCGACCCGGTGGTGTGGGAGCGCACCC
GCACCGAGCAGCTGTTCGGCTTCCGCTACCGCATCGAGATCTACGTACCGGAGCCGCAGCGGGTGCACGGCTACTACGTG
CTGCCGTTCCTCCTCGGCGATCGGCTCGTCGGGCGGGTCGACCTGAAGGCCGACCGCCAGTACGACGCCGGGGCCGGCCG
GTTGCTGGTCAAGGCGGCGTACGCCGAGCCGGACGCTCCCGCGGAGACCCCCGAGGAGCTCGCCGCGGAGCTGGCCGCGA
TGGCGGGCTGGCTCGGGCTGGGCTCGGTCGTCGTGGAGCCGCGTGGCGACCTGGCCCCCGCGCTCAGCCGGTTCATTTAG

Upstream 100 bases:

>100_bases
CTTGCCAGAGCACGCACCGGACGCCACGGATCTGTTCCACCGTGCGGGCGGACCGGAGCCGACCTGAGGTTGTCGGCGCC
CTCCTCTAGGGTCTCGCCTC

Downstream 100 bases:

>100_bases
GGCGGCCTCGGGCGGCTGGGTAGAGTGGCGGAGGCCTGTCTACACCCCATCCAGGAGTCCGTGCCTCGTGCCTGCCATTC
TCGACAAGATCCTCCGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MESLSNAQARRVALAAQGFLDPRHTIPTMRTFQRTLERTGVLQVDSVNVLQRAHYMPVFSRIGRYDVELLRRAAERRPRR
MVEYWAHVQAYMPVELWPVMQHRMAAYRQKRGKWGFVVGDDGLEQSLLEEIRERGASTARDLDDGLPRDKTHWGWNWSET
RKVLDYLYMSGAVAIADRNTQFEIRYDLPERVLPAEVLAQPTPSLDDANRELIRRAARSHGVASVQDLRDYYRMEVAPAA
RAVAELVEEGELLPVAVEGWRRPAYLHRDARLPRRVRARALLSPFDPVVWERTRTEQLFGFRYRIEIYVPEPQRVHGYYV
LPFLLGDRLVGRVDLKADRQYDAGAGRLLVKAAYAEPDAPAETPEELAAELAAMAGWLGLGSVVVEPRGDLAPALSRFI

Sequences:

>Translated_399_residues
MESLSNAQARRVALAAQGFLDPRHTIPTMRTFQRTLERTGVLQVDSVNVLQRAHYMPVFSRIGRYDVELLRRAAERRPRR
MVEYWAHVQAYMPVELWPVMQHRMAAYRQKRGKWGFVVGDDGLEQSLLEEIRERGASTARDLDDGLPRDKTHWGWNWSET
RKVLDYLYMSGAVAIADRNTQFEIRYDLPERVLPAEVLAQPTPSLDDANRELIRRAARSHGVASVQDLRDYYRMEVAPAA
RAVAELVEEGELLPVAVEGWRRPAYLHRDARLPRRVRARALLSPFDPVVWERTRTEQLFGFRYRIEIYVPEPQRVHGYYV
LPFLLGDRLVGRVDLKADRQYDAGAGRLLVKAAYAEPDAPAETPEELAAELAAMAGWLGLGSVVVEPRGDLAPALSRFI
>Mature_399_residues
MESLSNAQARRVALAAQGFLDPRHTIPTMRTFQRTLERTGVLQVDSVNVLQRAHYMPVFSRIGRYDVELLRRAAERRPRR
MVEYWAHVQAYMPVELWPVMQHRMAAYRQKRGKWGFVVGDDGLEQSLLEEIRERGASTARDLDDGLPRDKTHWGWNWSET
RKVLDYLYMSGAVAIADRNTQFEIRYDLPERVLPAEVLAQPTPSLDDANRELIRRAARSHGVASVQDLRDYYRMEVAPAA
RAVAELVEEGELLPVAVEGWRRPAYLHRDARLPRRVRARALLSPFDPVVWERTRTEQLFGFRYRIEIYVPEPQRVHGYYV
LPFLLGDRLVGRVDLKADRQYDAGAGRLLVKAAYAEPDAPAETPEELAAELAAMAGWLGLGSVVVEPRGDLAPALSRFI

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=352, Percent_Identity=34.6590909090909, Blast_Score=177, Evalue=9e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45693; Mature: 45693

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLSNAQARRVALAAQGFLDPRHTIPTMRTFQRTLERTGVLQVDSVNVLQRAHYMPVFS
CCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
RIGRYDVELLRRAAERRPRRMVEYWAHVQAYMPVELWPVMQHRMAAYRQKRGKWGFVVGD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECC
DGLEQSLLEEIRERGASTARDLDDGLPRDKTHWGWNWSETRKVLDYLYMSGAVAIADRNT
CCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCC
QFEIRYDLPERVLPAEVLAQPTPSLDDANRELIRRAARSHGVASVQDLRDYYRMEVAPAA
EEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RAVAELVEEGELLPVAVEGWRRPAYLHRDARLPRRVRARALLSPFDPVVWERTRTEQLFG
HHHHHHHHCCCEEEEEHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHCHHHHHHHHC
FRYRIEIYVPEPQRVHGYYVLPFLLGDRLVGRVDLKADRQYDAGAGRLLVKAAYAEPDAP
EEEEEEEEECCCCCCCCEEEHHHHHCCHHHEEEECCCCCCCCCCCCEEEEEEECCCCCCC
AETPEELAAELAAMAGWLGLGSVVVEPRGDLAPALSRFI
CCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MESLSNAQARRVALAAQGFLDPRHTIPTMRTFQRTLERTGVLQVDSVNVLQRAHYMPVFS
CCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
RIGRYDVELLRRAAERRPRRMVEYWAHVQAYMPVELWPVMQHRMAAYRQKRGKWGFVVGD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECC
DGLEQSLLEEIRERGASTARDLDDGLPRDKTHWGWNWSETRKVLDYLYMSGAVAIADRNT
CCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCC
QFEIRYDLPERVLPAEVLAQPTPSLDDANRELIRRAARSHGVASVQDLRDYYRMEVAPAA
EEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RAVAELVEEGELLPVAVEGWRRPAYLHRDARLPRRVRARALLSPFDPVVWERTRTEQLFG
HHHHHHHHCCCEEEEEHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHCHHHHHHHHC
FRYRIEIYVPEPQRVHGYYVLPFLLGDRLVGRVDLKADRQYDAGAGRLLVKAAYAEPDAP
EEEEEEEEECCCCCCCCEEEHHHHHCCHHHEEEECCCCCCCCCCCCEEEEEEECCCCCCC
AETPEELAAELAAMAGWLGLGSVVVEPRGDLAPALSRFI
CCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]