Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is ycaR [C]

Identifier: 119715662

GI number: 119715662

Start: 1510167

End: 1510337

Strand: Direct

Name: ycaR [C]

Synonym: Noca_1426

Alternate gene names: 119715662

Gene position: 1510167-1510337 (Clockwise)

Preceding gene: 119715661

Following gene: 119715663

Centisome position: 30.29

GC content: 69.01

Gene sequence:

>171_bases
GTGAACGCCGTGAACATCGATCCCGAGCTGCTGGAGATCATCGTCTGCCCGGCCTGCCGGTCCGAGCTGGACCTGGTCGA
GGCGGAGCTGGTGTGCCGCGGCTGCGGGCTGGCCTACCCGATCCGAGACGACATCCCGGTCCTGCTGGTCGACGAGGCCC
GCAAGCCCTGA

Upstream 100 bases:

>100_bases
CTGAACGCCGAGGGCCGAGACGATGCCACCATGGCCGAGGTGCGCGACCGCGTGCTCGAGCAGATCCGGGCTGACCACCC
GAGCCCCGAGGAGGAGTGAC

Downstream 100 bases:

>100_bases
CGGGCCCCCGCGATGGTCAGCTGGTTCGACGAGTCCCGTCTCGACGACGTCGCCACCTTGGAGTCCGACGCCGAGCTGCG
CACGCTTGCCGAGTCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP

Sequences:

>Translated_56_residues
MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP
>Mature_56_residues
MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6164; Mature: 6164

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP
CCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP
CCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA