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The map label for this gene is ycjN [C]

Identifier: 119715656

GI number: 119715656

Start: 1504169

End: 1505443

Strand: Reverse

Name: ycjN [C]

Synonym: Noca_1420

Alternate gene names: 119715656

Gene position: 1505443-1504169 (Counterclockwise)

Preceding gene: 119715657

Following gene: 119715655

Centisome position: 30.19

GC content: 66.9

Gene sequence:

>1275_bases
ATGATGCGTTTCCCGTTTGGTCGCCGTGGGGGGCGGACGCGCCTGATCGCGGCGGCTGCGCTGGCGGTCGCCAGCGTGGC
CACCGTCGCAGGATGCGGCGCCGGCTCCGGAGCCAGTGCCGGTGACGAGGTCAAGCTGCGCTTCCTGTTCCCGGAGTACA
GCGCGAAGACCGCCCCGCTGATGCAGGCGATGGTCGACGACTTCAACCAGGCCAACGACGGCAAGATCGAGGTGAGCCTC
GAGATCGCCCCCTGGGACAAGATGCACGACAAGCTCGCGGTCTCCATGGGTTCGGGGCAGGCGCCCGACGTGTTCGGCTA
TGCCACCCGCTGGATCTCCGAGTTCGCGGGCCTCGACCAGCTCGCACCCCTCGACGAGCACCTCAGCGAGGACTTCAAGA
GCACGTTCAACCAGAAGGTGCTCGAGGCCGGCACGTACGACGGGAAGACCTACGGCCTTCCGGCCGCCGTCTCGGCGCGG
CTGCTGTTCTACCGCGCGGACGTGTTCGAGGAGGCCGGCCTGCAGGCGCCCCAGACCTGGGACGACCTGATGGAGGCCGC
GACGACCACCGGGCAGCCGCCGGAGCGCTACGGCCTCGGCGTACCCGCCAGCGGGATCGAGGTCGACACGTTCTTCAACT
ACTTCTTGTACAACAACGGGGGGGACATCCTCGACGAGAACGGCAAGTCGATGCTCAGTGCCCCGGAGAGCGTCGAGGCC
CTGCAGTACCTCACCGACCTGGTCAAGGCCGGGGGCAGTGAGCCGAAGCCCACCGGCTTCACCCGCGAGCAGGTCATCGA
GAACTTCAAGGCCGGCCAGCTGTCCATGTATCCCACCGGTCCGTGGCTCAACGCCATGATCGAGGCCGACAACCCGGACC
TCGAGTACTCCGCGGTGCCGTTCCCGACCAACGACGGCAAGCCACAGCAGACCGTCTCCGTGACCGACTCGCTCGGTCTG
TCGGCGAACACCGAGCACCCCGACGAGGCGTGGAAGTTCGTCGAGTTCATGTACCAGACGAAGTACCGCCAGGCCTTCGA
CGAGGGCGAGGGCATGCTCCCGGAGCTGATCGCCGTGAGCCAGTCGGACTACTTCCAGAGCCCCGAGTACAAGCCGTTCG
TCGACGCCCTCGACACTGCCAAGTTCCAGCCGCAGCACCCCAAGTTCGAGCAGATCCAGCAGATCGAGACCGTCGCCGTG
CAGAAGGCGCTCAGCGGCCAGGCCACGCCCCAGGAGGCGCTGGACGAGGCCACCGAGCAGATCGACAAGCTCTGA

Upstream 100 bases:

>100_bases
GCGATCCCGTCGGCGAAGGCCTGTGACGCCGGCCCACCAGTCGCTCCGGCCCCCGGAGTAGCTCGAACAACCCAACCCGA
AGAGATAGGACCGTTCCATC

Downstream 100 bases:

>100_bases
CCGAGGGGCGGGTTGCCGGCGTCCCTCGCGTCGACAACCCGCCCCACCATCGCGCTCGACCCGAGGACTGACCATGGCCA
TCACTGGCGAAGCCGCACCG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MMRFPFGRRGGRTRLIAAAALAVASVATVAGCGAGSGASAGDEVKLRFLFPEYSAKTAPLMQAMVDDFNQANDGKIEVSL
EIAPWDKMHDKLAVSMGSGQAPDVFGYATRWISEFAGLDQLAPLDEHLSEDFKSTFNQKVLEAGTYDGKTYGLPAAVSAR
LLFYRADVFEEAGLQAPQTWDDLMEAATTTGQPPERYGLGVPASGIEVDTFFNYFLYNNGGDILDENGKSMLSAPESVEA
LQYLTDLVKAGGSEPKPTGFTREQVIENFKAGQLSMYPTGPWLNAMIEADNPDLEYSAVPFPTNDGKPQQTVSVTDSLGL
SANTEHPDEAWKFVEFMYQTKYRQAFDEGEGMLPELIAVSQSDYFQSPEYKPFVDALDTAKFQPQHPKFEQIQQIETVAV
QKALSGQATPQEALDEATEQIDKL

Sequences:

>Translated_424_residues
MMRFPFGRRGGRTRLIAAAALAVASVATVAGCGAGSGASAGDEVKLRFLFPEYSAKTAPLMQAMVDDFNQANDGKIEVSL
EIAPWDKMHDKLAVSMGSGQAPDVFGYATRWISEFAGLDQLAPLDEHLSEDFKSTFNQKVLEAGTYDGKTYGLPAAVSAR
LLFYRADVFEEAGLQAPQTWDDLMEAATTTGQPPERYGLGVPASGIEVDTFFNYFLYNNGGDILDENGKSMLSAPESVEA
LQYLTDLVKAGGSEPKPTGFTREQVIENFKAGQLSMYPTGPWLNAMIEADNPDLEYSAVPFPTNDGKPQQTVSVTDSLGL
SANTEHPDEAWKFVEFMYQTKYRQAFDEGEGMLPELIAVSQSDYFQSPEYKPFVDALDTAKFQPQHPKFEQIQQIETVAV
QKALSGQATPQEALDEATEQIDKL
>Mature_424_residues
MMRFPFGRRGGRTRLIAAAALAVASVATVAGCGAGSGASAGDEVKLRFLFPEYSAKTAPLMQAMVDDFNQANDGKIEVSL
EIAPWDKMHDKLAVSMGSGQAPDVFGYATRWISEFAGLDQLAPLDEHLSEDFKSTFNQKVLEAGTYDGKTYGLPAAVSAR
LLFYRADVFEEAGLQAPQTWDDLMEAATTTGQPPERYGLGVPASGIEVDTFFNYFLYNNGGDILDENGKSMLSAPESVEA
LQYLTDLVKAGGSEPKPTGFTREQVIENFKAGQLSMYPTGPWLNAMIEADNPDLEYSAVPFPTNDGKPQQTVSVTDSLGL
SANTEHPDEAWKFVEFMYQTKYRQAFDEGEGMLPELIAVSQSDYFQSPEYKPFVDALDTAKFQPQHPKFEQIQQIETVAV
QKALSGQATPQEALDEATEQIDKL

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=336, Percent_Identity=24.702380952381, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46339; Mature: 46339

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRFPFGRRGGRTRLIAAAALAVASVATVAGCGAGSGASAGDEVKLRFLFPEYSAKTAPL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHH
MQAMVDDFNQANDGKIEVSLEIAPWDKMHDKLAVSMGSGQAPDVFGYATRWISEFAGLDQ
HHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCHH
LAPLDEHLSEDFKSTFNQKVLEAGTYDGKTYGLPAAVSARLLFYRADVFEEAGLQAPQTW
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
DDLMEAATTTGQPPERYGLGVPASGIEVDTFFNYFLYNNGGDILDENGKSMLSAPESVEA
HHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHEEEEEECCCCCCCCCCCCHHHCCCHHHHH
LQYLTDLVKAGGSEPKPTGFTREQVIENFKAGQLSMYPTGPWLNAMIEADNPDLEYSAVP
HHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCHHHHEEEECCCCCCCEEECC
FPTNDGKPQQTVSVTDSLGLSANTEHPDEAWKFVEFMYQTKYRQAFDEGEGMLPELIAVS
CCCCCCCCCCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
QSDYFQSPEYKPFVDALDTAKFQPQHPKFEQIQQIETVAVQKALSGQATPQEALDEATEQ
CHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IDKL
HHCC
>Mature Secondary Structure
MMRFPFGRRGGRTRLIAAAALAVASVATVAGCGAGSGASAGDEVKLRFLFPEYSAKTAPL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHH
MQAMVDDFNQANDGKIEVSLEIAPWDKMHDKLAVSMGSGQAPDVFGYATRWISEFAGLDQ
HHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCHH
LAPLDEHLSEDFKSTFNQKVLEAGTYDGKTYGLPAAVSARLLFYRADVFEEAGLQAPQTW
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
DDLMEAATTTGQPPERYGLGVPASGIEVDTFFNYFLYNNGGDILDENGKSMLSAPESVEA
HHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHEEEEEECCCCCCCCCCCCHHHCCCHHHHH
LQYLTDLVKAGGSEPKPTGFTREQVIENFKAGQLSMYPTGPWLNAMIEADNPDLEYSAVP
HHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCHHHHEEEECCCCCCCEEECC
FPTNDGKPQQTVSVTDSLGLSANTEHPDEAWKFVEFMYQTKYRQAFDEGEGMLPELIAVS
CCCCCCCCCCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
QSDYFQSPEYKPFVDALDTAKFQPQHPKFEQIQQIETVAVQKALSGQATPQEALDEATEQ
CHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IDKL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA