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The map label for this gene is ycjP [H]

Identifier: 119715654

GI number: 119715654

Start: 1502324

End: 1503154

Strand: Reverse

Name: ycjP [H]

Synonym: Noca_1418

Alternate gene names: 119715654

Gene position: 1503154-1502324 (Counterclockwise)

Preceding gene: 119715655

Following gene: 119715653

Centisome position: 30.15

GC content: 66.43

Gene sequence:

>831_bases
ATGACCCGCGACCGAGCGCTCGCGCGCTGGCTGCTCCTGAGCTTCCTGATCCTGGTGCTGGCGGTATCGACCTTCCCGTT
CGCGTTCGCGTTCTCGACCGCGCTCCGGCCGCGTGCGGAGCTGTTCCACTACCCGCCGACCTGGCTCCCCGACACCTGGT
CGTGGCACAACTTCGTCGACGTGTGGAGTGCGGTGCCGTTGGCGCGCTACGTCCGGAACAGCCTCGTCGTCTCACTCGGC
GCGACCGCGCTCAACGTGACGTTGGCCGTGCCCGCGGCCTACGCCCTTGCCCGGCTGGACTTCCCCGGCAAGACGCTGTT
CCGCCAGCTCCTGCTCGTGACCCAGATGTTCTCGCCCGTCGTGCTGGTCATCGGGCTCTTCCGGTTCATGAGCCGGCTCC
AGCTCGTGGACACCAGCAGCTCGCTCATCATCACCTACGCCGCCCTCAGCCTGGCCTTCTCCGTGTGGTTCCTGGCGGGC
TACTTCGAGTCGGTGCCGGTCGAGATCGAGGAAGCGGCGATGATCGACGGATGTAGCCGGGTCACCGCCCTGGTGCGCGT
CGTGCTCCCCATGTCCGCGCCGGGTCTGGTCGCTGCCCTCGTCTTCGCGTTCATCTGGTCCTGGAACGAGTTCATGATCG
CGCTCACCTTCATCTCCACACCCGACAAGCGGACCCTGCCGCTGGGCATCTACTCCTTCCTCGGGCAGTACTCCGTCGAG
TGGCACTACCTGATGGCAGCCGCACTCATCGCCGGGATCCCGGTCCTGGTGCTGTTCCTCCTGATCGAGAAGCACTTGGT
CAAGGGCCTCACGGCCGGGGCCGTCAAGTGA

Upstream 100 bases:

>100_bases
GGCCTGCGGCCGCCATGGCGATGGTGACGTTCGTGCTGCTCCTCGTCTTCAGTCTCGGCTTCTCCTACCTCACCCGTGAG
CGCACCCGGGCGGGTGGGCG

Downstream 100 bases:

>100_bases
CCGGCGGGCACGCTCGCGTCGATCTGCTCCTCCGCGGGGGGCGAGTCGTCGACGGCACCGGCGCACCGTGGCGCCATGCC
GACGTACTGGTCGGGAACGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTRDRALARWLLLSFLILVLAVSTFPFAFAFSTALRPRAELFHYPPTWLPDTWSWHNFVDVWSAVPLARYVRNSLVVSLG
ATALNVTLAVPAAYALARLDFPGKTLFRQLLLVTQMFSPVVLVIGLFRFMSRLQLVDTSSSLIITYAALSLAFSVWFLAG
YFESVPVEIEEAAMIDGCSRVTALVRVVLPMSAPGLVAALVFAFIWSWNEFMIALTFISTPDKRTLPLGIYSFLGQYSVE
WHYLMAAALIAGIPVLVLFLLIEKHLVKGLTAGAVK

Sequences:

>Translated_276_residues
MTRDRALARWLLLSFLILVLAVSTFPFAFAFSTALRPRAELFHYPPTWLPDTWSWHNFVDVWSAVPLARYVRNSLVVSLG
ATALNVTLAVPAAYALARLDFPGKTLFRQLLLVTQMFSPVVLVIGLFRFMSRLQLVDTSSSLIITYAALSLAFSVWFLAG
YFESVPVEIEEAAMIDGCSRVTALVRVVLPMSAPGLVAALVFAFIWSWNEFMIALTFISTPDKRTLPLGIYSFLGQYSVE
WHYLMAAALIAGIPVLVLFLLIEKHLVKGLTAGAVK
>Mature_275_residues
TRDRALARWLLLSFLILVLAVSTFPFAFAFSTALRPRAELFHYPPTWLPDTWSWHNFVDVWSAVPLARYVRNSLVVSLGA
TALNVTLAVPAAYALARLDFPGKTLFRQLLLVTQMFSPVVLVIGLFRFMSRLQLVDTSSSLIITYAALSLAFSVWFLAGY
FESVPVEIEEAAMIDGCSRVTALVRVVLPMSAPGLVAALVFAFIWSWNEFMIALTFISTPDKRTLPLGIYSFLGQYSVEW
HYLMAAALIAGIPVLVLFLLIEKHLVKGLTAGAVK

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=35.7400722021661, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1790464, Length=218, Percent_Identity=33.4862385321101, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789860, Length=265, Percent_Identity=29.0566037735849, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30681; Mature: 30550

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDRALARWLLLSFLILVLAVSTFPFAFAFSTALRPRAELFHYPPTWLPDTWSWHNFVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHH
VWSAVPLARYVRNSLVVSLGATALNVTLAVPAAYALARLDFPGKTLFRQLLLVTQMFSPV
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VLVIGLFRFMSRLQLVDTSSSLIITYAALSLAFSVWFLAGYFESVPVEIEEAAMIDGCSR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VTALVRVVLPMSAPGLVAALVFAFIWSWNEFMIALTFISTPDKRTLPLGIYSFLGQYSVE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCH
WHYLMAAALIAGIPVLVLFLLIEKHLVKGLTAGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRDRALARWLLLSFLILVLAVSTFPFAFAFSTALRPRAELFHYPPTWLPDTWSWHNFVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHH
VWSAVPLARYVRNSLVVSLGATALNVTLAVPAAYALARLDFPGKTLFRQLLLVTQMFSPV
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VLVIGLFRFMSRLQLVDTSSSLIITYAALSLAFSVWFLAGYFESVPVEIEEAAMIDGCSR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VTALVRVVLPMSAPGLVAALVFAFIWSWNEFMIALTFISTPDKRTLPLGIYSFLGQYSVE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCH
WHYLMAAALIAGIPVLVLFLLIEKHLVKGLTAGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]