| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715619
Identifier: 119715619
GI number: 119715619
Start: 1460421
End: 1461047
Strand: Direct
Name: 119715619
Synonym: Noca_1383
Alternate gene names: NA
Gene position: 1460421-1461047 (Clockwise)
Preceding gene: 119715618
Following gene: 119715620
Centisome position: 29.29
GC content: 67.3
Gene sequence:
>627_bases ATGACCTCCGACACGACCACCGGCACCCGTTCCCGGGCGGACTTCTGGTTCGACCCGGCCTGTCCGTTCGCCTGGATCAC CTCCCGGTGGATCCTCGAGGTCGAGAAGGTCCGGGACATCGACGTGACCTGGCACATCATGAGCCTGGCCTACCTCAACC AGGACAAGGACATCTCCGACGAGTACCGCGAGTTCCTGGCCACCGCCTGGGAGCCGGTGCGCGTGCTGATGGCCGCGGAG CAGAAGTACGGCAAGGACGTCCTGCTGCCGCTGTACACCGCGATGGGCACCCGGATCCACATCGGGAAGCAGGACCGGGA CCGCGCGATGATCGAGGCGGCCCTCGCGGACGCCGGTCTCGACCTGGCGCTCGCCGACGCGATGGACGACTCGTCGTACG ACGAGGCGATCGCGCGCTCCCACCACCTCGGCATGGACCAGGTCGGCAACGAGGTCGGCACCCCCACGATCGCGTTCGAG GGTCACGCGTTCTTCGGGCCGGTGCTCAGCAAGACCCCACGCGGTGAGGATGCCGGCCGGATGTGGGACGCGTTCGTCAC GCTCTCGGCCTTCGAGGACTTCTACGAGCTCAAGCGCAGCCGCACCAAGGACCTCGACTTCACCTGA
Upstream 100 bases:
>100_bases ACCCTCCTGCTGATGTGGCGGACCGAGCTCAACAGCGCCTGGTACGTCGCCGGGGGCGCGACCGCGGGAATAGTCCTCGG CCTGATCGGTTGGAACTGAC
Downstream 100 bases:
>100_bases GCGGCGCCCCTAGCCTCGGGGACATGACCACGCACCACACACCGCAGGCCAGCTGGGGTGACGACGTCCGGGTGCTCGCG CGGGCGCTCGACCAGGCCGG
Product: DsbA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTSDTTTGTRSRADFWFDPACPFAWITSRWILEVEKVRDIDVTWHIMSLAYLNQDKDISDEYREFLATAWEPVRVLMAAE QKYGKDVLLPLYTAMGTRIHIGKQDRDRAMIEAALADAGLDLALADAMDDSSYDEAIARSHHLGMDQVGNEVGTPTIAFE GHAFFGPVLSKTPRGEDAGRMWDAFVTLSAFEDFYELKRSRTKDLDFT
Sequences:
>Translated_208_residues MTSDTTTGTRSRADFWFDPACPFAWITSRWILEVEKVRDIDVTWHIMSLAYLNQDKDISDEYREFLATAWEPVRVLMAAE QKYGKDVLLPLYTAMGTRIHIGKQDRDRAMIEAALADAGLDLALADAMDDSSYDEAIARSHHLGMDQVGNEVGTPTIAFE GHAFFGPVLSKTPRGEDAGRMWDAFVTLSAFEDFYELKRSRTKDLDFT >Mature_207_residues TSDTTTGTRSRADFWFDPACPFAWITSRWILEVEKVRDIDVTWHIMSLAYLNQDKDISDEYREFLATAWEPVRVLMAAEQ KYGKDVLLPLYTAMGTRIHIGKQDRDRAMIEAALADAGLDLALADAMDDSSYDEAIARSHHLGMDQVGNEVGTPTIAFEG HAFFGPVLSKTPRGEDAGRMWDAFVTLSAFEDFYELKRSRTKDLDFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23543; Mature: 23411
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDTTTGTRSRADFWFDPACPFAWITSRWILEVEKVRDIDVTWHIMSLAYLNQDKDISD CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH EYREFLATAWEPVRVLMAAEQKYGKDVLLPLYTAMGTRIHIGKQDRDRAMIEAALADAGL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCC DLALADAMDDSSYDEAIARSHHLGMDQVGNEVGTPTIAFEGHAFFGPVLSKTPRGEDAGR CEEEHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCHHHCCCCCCCCHHH MWDAFVTLSAFEDFYELKRSRTKDLDFT HHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSDTTTGTRSRADFWFDPACPFAWITSRWILEVEKVRDIDVTWHIMSLAYLNQDKDISD CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH EYREFLATAWEPVRVLMAAEQKYGKDVLLPLYTAMGTRIHIGKQDRDRAMIEAALADAGL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCC DLALADAMDDSSYDEAIARSHHLGMDQVGNEVGTPTIAFEGHAFFGPVLSKTPRGEDAGR CEEEHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCHHHCCCCCCCCHHH MWDAFVTLSAFEDFYELKRSRTKDLDFT HHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]