| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715601
Identifier: 119715601
GI number: 119715601
Start: 1440810
End: 1441943
Strand: Direct
Name: 119715601
Synonym: Noca_1365
Alternate gene names: NA
Gene position: 1440810-1441943 (Clockwise)
Preceding gene: 119715595
Following gene: 119715602
Centisome position: 28.9
GC content: 73.19
Gene sequence:
>1134_bases ATGCCTGGAGCCCGCCGCGACCGTGCGACCTCGTCGGTCGCGTTCGCGGTCGTGGTGACCGTGCTCGTGTGTCTCGGCGC GCTCGCGATCCTGGCGCTGCTGGCCTTCTCCGGCGCCCCCGGGTCCCTGGCCCTGGCCACCGTGCTGGCGGCGCTGCCGG TGGGCCCGCTCGTGGCCTGCTACCTCTGGCTGGACCGCTACGAGCCGGAGCCGCGCACCCTGCTCGCGGCCGGCCTGCTC TGGGGCTGCTTCGTGGCCACCGCGGCCGCCCTGCTCATCCAGGGCGTCGGGGGCTTCGTCCTCTCCTTCACCGACAACCA GAGCCTCGCCGTCGTCGCGCCGGTCACCGAGGAGGCCAGCAAGGGGATCTTCCTGCTGCTGCTCCTGTGGTGGCGCCTGG CCGAGCTGGACGGCGTGCTCGACGGCATCGTGTACGCCGGCATGGTCGGCATCGGCTTCGCCTTCACCGAGAACATCCTC TACCTGGCCGCGGCGTACAACGGCACCGACGGCGCGGGGCCGGGCGGCACCGAGGCGCTCACCGCGACGTTCGTGGTGCG CTGCCTGTTCAGCCCGTTCGCCCATCCCCTGTTCACGGCGTTCACCGGCATCGGGGTCGGACTCGCCGTCAACGCCCGCA GCCGGCCGGCCCGCATCCTGTGGCCGCTGGGCGGGTACGCGGGTGCTGTGGTCGCGCATGCCGTCTGGAACACCTCCACG GTCTACGGCTTCGACAACTTCGTCATCGCGTACGTCGTGCTGATGGCACCCGCCTTCGTGGCGCTGACCGGCCTCGCGGT GTGGGTGCGCAGCTCCGAGCGTCGGGTTCTCGCCGCCGCCCTCACCGACGCCGCGCGTCGAGGGCTGGTGCCGGCGACCG ACATCGGCTGGGTCGTCGACCTCGGGGCCCGCAGGCGCAGCCGCGCCTACGCGCGCCAGCTGGGCGGCCGGCCGGCGGAG CGCGCGGTGCGCGACTACCAGCAGGCCGCCATCGAGCTCGGGTTCTTGCACTACCGCTTCCTGCGCGGCACCCCGCCGCC CGACTACGCCGAGCGCGGACAGCAGTTCCTCCAGCGGATCGCGGCCCTGCGGCCGTCGATCGCCTTCCCCGGACAGGTGG TACCGACCAGATGA
Upstream 100 bases:
>100_bases TCGGTGCCCTCGGGCGGGGTCTGCTCGCTCACGCGGTCACTGTACGCCGGGGGCCGCCAGGACCGCGGCCCCGCGGACCT GCCCCGATAGGCTGGCGTCC
Downstream 100 bases:
>100_bases GTCTCTCCCGCGACGAGAGCGACCCGATGGACACCCGGATGCTGACCGCCCTGGTGCAGCTGCGTGGTGCCCTGCAGGCC GCGCGGCTGCCGCTGGAGGT
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPGARRDRATSSVAFAVVVTVLVCLGALAILALLAFSGAPGSLALATVLAALPVGPLVACYLWLDRYEPEPRTLLAAGLL WGCFVATAAALLIQGVGGFVLSFTDNQSLAVVAPVTEEASKGIFLLLLLWWRLAELDGVLDGIVYAGMVGIGFAFTENIL YLAAAYNGTDGAGPGGTEALTATFVVRCLFSPFAHPLFTAFTGIGVGLAVNARSRPARILWPLGGYAGAVVAHAVWNTST VYGFDNFVIAYVVLMAPAFVALTGLAVWVRSSERRVLAAALTDAARRGLVPATDIGWVVDLGARRRSRAYARQLGGRPAE RAVRDYQQAAIELGFLHYRFLRGTPPPDYAERGQQFLQRIAALRPSIAFPGQVVPTR
Sequences:
>Translated_377_residues MPGARRDRATSSVAFAVVVTVLVCLGALAILALLAFSGAPGSLALATVLAALPVGPLVACYLWLDRYEPEPRTLLAAGLL WGCFVATAAALLIQGVGGFVLSFTDNQSLAVVAPVTEEASKGIFLLLLLWWRLAELDGVLDGIVYAGMVGIGFAFTENIL YLAAAYNGTDGAGPGGTEALTATFVVRCLFSPFAHPLFTAFTGIGVGLAVNARSRPARILWPLGGYAGAVVAHAVWNTST VYGFDNFVIAYVVLMAPAFVALTGLAVWVRSSERRVLAAALTDAARRGLVPATDIGWVVDLGARRRSRAYARQLGGRPAE RAVRDYQQAAIELGFLHYRFLRGTPPPDYAERGQQFLQRIAALRPSIAFPGQVVPTR >Mature_376_residues PGARRDRATSSVAFAVVVTVLVCLGALAILALLAFSGAPGSLALATVLAALPVGPLVACYLWLDRYEPEPRTLLAAGLLW GCFVATAAALLIQGVGGFVLSFTDNQSLAVVAPVTEEASKGIFLLLLLWWRLAELDGVLDGIVYAGMVGIGFAFTENILY LAAAYNGTDGAGPGGTEALTATFVVRCLFSPFAHPLFTAFTGIGVGLAVNARSRPARILWPLGGYAGAVVAHAVWNTSTV YGFDNFVIAYVVLMAPAFVALTGLAVWVRSSERRVLAAALTDAARRGLVPATDIGWVVDLGARRRSRAYARQLGGRPAER AVRDYQQAAIELGFLHYRFLRGTPPPDYAERGQQFLQRIAALRPSIAFPGQVVPTR
Specific function: Unknown
COG id: COG2339
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39947; Mature: 39816
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGARRDRATSSVAFAVVVTVLVCLGALAILALLAFSGAPGSLALATVLAALPVGPLVAC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHH YLWLDRYEPEPRTLLAAGLLWGCFVATAAALLIQGVGGFVLSFTDNQSLAVVAPVTEEAS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHHH KGIFLLLLLWWRLAELDGVLDGIVYAGMVGIGFAFTENILYLAAAYNGTDGAGPGGTEAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHH TATFVVRCLFSPFAHPLFTAFTGIGVGLAVNARSRPARILWPLGGYAGAVVAHAVWNTST HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCE VYGFDNFVIAYVVLMAPAFVALTGLAVWVRSSERRVLAAALTDAARRGLVPATDIGWVVD EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHC LGARRRSRAYARQLGGRPAERAVRDYQQAAIELGFLHYRFLRGTPPPDYAERGQQFLQRI CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AALRPSIAFPGQVVPTR HHHCCCCCCCCCCCCCC >Mature Secondary Structure PGARRDRATSSVAFAVVVTVLVCLGALAILALLAFSGAPGSLALATVLAALPVGPLVAC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHH YLWLDRYEPEPRTLLAAGLLWGCFVATAAALLIQGVGGFVLSFTDNQSLAVVAPVTEEAS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHHH KGIFLLLLLWWRLAELDGVLDGIVYAGMVGIGFAFTENILYLAAAYNGTDGAGPGGTEAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHH TATFVVRCLFSPFAHPLFTAFTGIGVGLAVNARSRPARILWPLGGYAGAVVAHAVWNTST HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCE VYGFDNFVIAYVVLMAPAFVALTGLAVWVRSSERRVLAAALTDAARRGLVPATDIGWVVD EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHC LGARRRSRAYARQLGGRPAERAVRDYQQAAIELGFLHYRFLRGTPPPDYAERGQQFLQRI CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AALRPSIAFPGQVVPTR HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA