| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715588
Identifier: 119715588
GI number: 119715588
Start: 1429807
End: 1430292
Strand: Direct
Name: 119715588
Synonym: Noca_1352
Alternate gene names: NA
Gene position: 1429807-1430292 (Clockwise)
Preceding gene: 119715586
Following gene: 119715589
Centisome position: 28.68
GC content: 72.43
Gene sequence:
>486_bases GTGGCGACGACGTTGACCGGGTGGCTGGGCCTGCTCGCGCGCCTGGTGACCGGAGGGGTCTGGATCGCCGCCGGCGCCGT CAAGCTGCCGGACCCCGCCCAGAGCGTCGACGCCGTGCGGGCCTACCAGCTGCTCCCCGCGTCCCTGGTCGAGCCGGTCG GACAGCTGCTCCCGGTCGTCGAGATCGTGGTCGGTGCGACCCTGGTGCTCGGCCTGTTGACCCGGGGCTCGGCCATCGTC TCCGCACTGCTGTTCGCGGCCTTCATCATCGGCATCGCGTCGGTGTGGGCCCGCGGCATCACCATCGACTGCGGCTGCTT CGGGGGCGGGGGCTACGACCCGGACGCGGCGTCGAAGTACCCCTGGGAGATCGCCCGCGACGGTGCCCTCCTGATCGCCT CCCTGTTCGTTGCCTGGCTGCCGACGACCCGCCTGGCACTGGACTCGGTCCTCTTCGGCCGCGTCCCCGAGCCCGAAGGA CCCTGA
Upstream 100 bases:
>100_bases CGATCCAGACGAGTCGTTCGTTCACGGCTGCCACCTTAGCCCCGGGCCCGGTCGGCGCTTCTCTCAGTCACAGTTCAGCC TCGGGCTCTAGGGTCGCGGG
Downstream 100 bases:
>100_bases TGTCGAAGAAGAACCGTCCCGCCGGCCGCGCCGAACGCGCGGCAGCCGCGCTGCGTGAGCAGCAGCAGCAGGAACGCCGC CGGCGCAACCTGATGGTCGG
Product: DoxX family protein
Products: NA
Alternate protein names: Methylamine Utilization MauE; DoxX Protein; Integral Membrane Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MATTLTGWLGLLARLVTGGVWIAAGAVKLPDPAQSVDAVRAYQLLPASLVEPVGQLLPVVEIVVGATLVLGLLTRGSAIV SALLFAAFIIGIASVWARGITIDCGCFGGGGYDPDAASKYPWEIARDGALLIASLFVAWLPTTRLALDSVLFGRVPEPEG P
Sequences:
>Translated_161_residues MATTLTGWLGLLARLVTGGVWIAAGAVKLPDPAQSVDAVRAYQLLPASLVEPVGQLLPVVEIVVGATLVLGLLTRGSAIV SALLFAAFIIGIASVWARGITIDCGCFGGGGYDPDAASKYPWEIARDGALLIASLFVAWLPTTRLALDSVLFGRVPEPEG P >Mature_160_residues ATTLTGWLGLLARLVTGGVWIAAGAVKLPDPAQSVDAVRAYQLLPASLVEPVGQLLPVVEIVVGATLVLGLLTRGSAIVS ALLFAAFIIGIASVWARGITIDCGCFGGGGYDPDAASKYPWEIARDGALLIASLFVAWLPTTRLALDSVLFGRVPEPEGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16624; Mature: 16492
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTLTGWLGLLARLVTGGVWIAAGAVKLPDPAQSVDAVRAYQLLPASLVEPVGQLLPVV CCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIVVGATLVLGLLTRGSAIVSALLFAAFIIGIASVWARGITIDCGCFGGGGYDPDAASKY HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCC PWEIARDGALLIASLFVAWLPTTRLALDSVLFGRVPEPEGP CHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ATTLTGWLGLLARLVTGGVWIAAGAVKLPDPAQSVDAVRAYQLLPASLVEPVGQLLPVV CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIVVGATLVLGLLTRGSAIVSALLFAAFIIGIASVWARGITIDCGCFGGGGYDPDAASKY HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCC PWEIARDGALLIASLFVAWLPTTRLALDSVLFGRVPEPEGP CHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA