| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yhhW [C]
Identifier: 119715577
GI number: 119715577
Start: 1414310
End: 1415257
Strand: Direct
Name: yhhW [C]
Synonym: Noca_1341
Alternate gene names: 119715577
Gene position: 1414310-1415257 (Clockwise)
Preceding gene: 119715576
Following gene: 119715578
Centisome position: 28.37
GC content: 71.2
Gene sequence:
>948_bases ATGCCCGCTGTGACCGTGGCCGACCTGACCGTCCTCCCTCGCGTCCGCGAGCCCGGGCTCGGTGACCAGCCCCGCCCCGT GTGGCAGGTCAGCACCGCGCCGCAGGGTTACGAGGGCGAGGGGTTCCCGGTGCGTCGCGCGTTCGCAGGCATCGACCTCC AGCACCTCGACCCGTTCATCATGATGGACCAGATGGGCGAGGTCGAGTACGCGCCCGGTGAGCCGAAGGGCACGCCCTGG CACCCGCACCGCGGCTTCGAGACCGTCACCTACATCATCGACGGCGTCTTCGACCATCAGGACAGCCACGGTGGCGGCGG CACGATCACCAACGGCGACACCCAGTGGATGACCGCCGGCTCCGGCCTCCTGCACATCGAGGCCCCGCCGGAGTGGCTGG TCCAGCAGGGCGGCCTCTTCCACGGCATCCAGCTCTGGGTGAACCTGCCGCGGGACGCCAAGATGAACGATCCCCGCTAC CAGGACATCCGGTCGGGCTCGGTCCAGCTGCTCACCAGCGCCGACGCCGGCGCGCTGGTCCGCGTGATCGCCGGCACCGT CGACGGGCACGCCGGCCCGGGGTCGACGTACACGCCGATGTCGTTGGTCCACGCGACCGTGGAGCCGGGCGCGCGCCTGG ACCTGCCGTGGAACGTCGACTTCAACGCACTGGTCTACGTGCTCAACGGCGCCGGGACCGTGGGGACCGACGCCCACCCC GTCCACACCGGTCAGGCGGCCGTGCTCGGGGCGGGGGACTACCTGACGGTCGCGGCGAACCCGCGCCAGGAGGGCCGCTC GCCGAAGCTGGACGTGATCGTGGTCGGCGGCCAGCCGATCCGTGAGCCGCTCGCGTGGGCCGGGCCGTTCGTGATGAACA CCAAGTCCGAGGTGATGCAGGCCTACGAGGACTTCCAGCACGGTCGCTTCGGCCACATCCCCGGCTGA
Upstream 100 bases:
>100_bases GCCCTGACGCGCACCGCGACGCAGCCACGCCACCGGAATATCCAACTTTCAACGACCGTTGGGCCTGGTGTTCCGACACC GACAGCAGGAGGTGGGCCGC
Downstream 100 bases:
>100_bases CGGGTCCCCCTGCCGCGTCCACGGATCGTCGGCCGTCGAGCTGCCGGCGGTCGACCTCGCGCGGCAAACGCGAGACAGTG AGGGCATGCGCCGCCTTCTC
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFIMMDQMGEVEYAPGEPKGTPW HPHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAGSGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRY QDIRSGSVQLLTSADAGALVRVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHP VHTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQAYEDFQHGRFGHIPG
Sequences:
>Translated_315_residues MPAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFIMMDQMGEVEYAPGEPKGTPW HPHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAGSGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRY QDIRSGSVQLLTSADAGALVRVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHP VHTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQAYEDFQHGRFGHIPG >Mature_314_residues PAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFIMMDQMGEVEYAPGEPKGTPWH PHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAGSGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRYQ DIRSGSVQLLTSADAGALVRVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHPV HTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQAYEDFQHGRFGHIPG
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=278, Percent_Identity=37.410071942446, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI4505823, Length=278, Percent_Identity=37.410071942446, Blast_Score=171, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 33826; Mature: 33695
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFI CCCEEEECEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCHHHCCCEE MMDQMGEVEYAPGEPKGTPWHPHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAG EECCCCCEEECCCCCCCCCCCCCCCHHEEEHHHHHHHCCCCCCCCCCEECCCCCEEEECC SGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRYQDIRSGSVQLLTSADAGALV CCEEEEECCHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCCCEE RVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHP EEEECCCCCCCCCCCCCCHHHHEEEECCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCC VHTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQ EECCCEEEEECCCEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHCCCEEECCHHHHHH AYEDFQHGRFGHIPG HHHHHHCCCCCCCCC >Mature Secondary Structure PAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFI CCEEEECEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCHHHCCCEE MMDQMGEVEYAPGEPKGTPWHPHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAG EECCCCCEEECCCCCCCCCCCCCCCHHEEEHHHHHHHCCCCCCCCCCEECCCCCEEEECC SGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRYQDIRSGSVQLLTSADAGALV CCEEEEECCHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCCCEE RVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHP EEEECCCCCCCCCCCCCCHHHHEEEECCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCC VHTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQ EECCCEEEEECCCEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHCCCEEECCHHHHHH AYEDFQHGRFGHIPG HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]