Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 119715577

GI number: 119715577

Start: 1414310

End: 1415257

Strand: Direct

Name: yhhW [C]

Synonym: Noca_1341

Alternate gene names: 119715577

Gene position: 1414310-1415257 (Clockwise)

Preceding gene: 119715576

Following gene: 119715578

Centisome position: 28.37

GC content: 71.2

Gene sequence:

>948_bases
ATGCCCGCTGTGACCGTGGCCGACCTGACCGTCCTCCCTCGCGTCCGCGAGCCCGGGCTCGGTGACCAGCCCCGCCCCGT
GTGGCAGGTCAGCACCGCGCCGCAGGGTTACGAGGGCGAGGGGTTCCCGGTGCGTCGCGCGTTCGCAGGCATCGACCTCC
AGCACCTCGACCCGTTCATCATGATGGACCAGATGGGCGAGGTCGAGTACGCGCCCGGTGAGCCGAAGGGCACGCCCTGG
CACCCGCACCGCGGCTTCGAGACCGTCACCTACATCATCGACGGCGTCTTCGACCATCAGGACAGCCACGGTGGCGGCGG
CACGATCACCAACGGCGACACCCAGTGGATGACCGCCGGCTCCGGCCTCCTGCACATCGAGGCCCCGCCGGAGTGGCTGG
TCCAGCAGGGCGGCCTCTTCCACGGCATCCAGCTCTGGGTGAACCTGCCGCGGGACGCCAAGATGAACGATCCCCGCTAC
CAGGACATCCGGTCGGGCTCGGTCCAGCTGCTCACCAGCGCCGACGCCGGCGCGCTGGTCCGCGTGATCGCCGGCACCGT
CGACGGGCACGCCGGCCCGGGGTCGACGTACACGCCGATGTCGTTGGTCCACGCGACCGTGGAGCCGGGCGCGCGCCTGG
ACCTGCCGTGGAACGTCGACTTCAACGCACTGGTCTACGTGCTCAACGGCGCCGGGACCGTGGGGACCGACGCCCACCCC
GTCCACACCGGTCAGGCGGCCGTGCTCGGGGCGGGGGACTACCTGACGGTCGCGGCGAACCCGCGCCAGGAGGGCCGCTC
GCCGAAGCTGGACGTGATCGTGGTCGGCGGCCAGCCGATCCGTGAGCCGCTCGCGTGGGCCGGGCCGTTCGTGATGAACA
CCAAGTCCGAGGTGATGCAGGCCTACGAGGACTTCCAGCACGGTCGCTTCGGCCACATCCCCGGCTGA

Upstream 100 bases:

>100_bases
GCCCTGACGCGCACCGCGACGCAGCCACGCCACCGGAATATCCAACTTTCAACGACCGTTGGGCCTGGTGTTCCGACACC
GACAGCAGGAGGTGGGCCGC

Downstream 100 bases:

>100_bases
CGGGTCCCCCTGCCGCGTCCACGGATCGTCGGCCGTCGAGCTGCCGGCGGTCGACCTCGCGCGGCAAACGCGAGACAGTG
AGGGCATGCGCCGCCTTCTC

Product: pirin domain-containing protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MPAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFIMMDQMGEVEYAPGEPKGTPW
HPHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAGSGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRY
QDIRSGSVQLLTSADAGALVRVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHP
VHTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQAYEDFQHGRFGHIPG

Sequences:

>Translated_315_residues
MPAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFIMMDQMGEVEYAPGEPKGTPW
HPHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAGSGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRY
QDIRSGSVQLLTSADAGALVRVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHP
VHTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQAYEDFQHGRFGHIPG
>Mature_314_residues
PAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFIMMDQMGEVEYAPGEPKGTPWH
PHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAGSGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRYQ
DIRSGSVQLLTSADAGALVRVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHPV
HTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQAYEDFQHGRFGHIPG

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=278, Percent_Identity=37.410071942446, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI4505823, Length=278, Percent_Identity=37.410071942446, Blast_Score=171, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 33826; Mature: 33695

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFI
CCCEEEECEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCHHHCCCEE
MMDQMGEVEYAPGEPKGTPWHPHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAG
EECCCCCEEECCCCCCCCCCCCCCCHHEEEHHHHHHHCCCCCCCCCCEECCCCCEEEECC
SGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRYQDIRSGSVQLLTSADAGALV
CCEEEEECCHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCCCEE
RVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHP
EEEECCCCCCCCCCCCCCHHHHEEEECCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCC
VHTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQ
EECCCEEEEECCCEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHCCCEEECCHHHHHH
AYEDFQHGRFGHIPG
HHHHHHCCCCCCCCC
>Mature Secondary Structure 
PAVTVADLTVLPRVREPGLGDQPRPVWQVSTAPQGYEGEGFPVRRAFAGIDLQHLDPFI
CCEEEECEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCHHHCCCEE
MMDQMGEVEYAPGEPKGTPWHPHRGFETVTYIIDGVFDHQDSHGGGGTITNGDTQWMTAG
EECCCCCEEECCCCCCCCCCCCCCCHHEEEHHHHHHHCCCCCCCCCCEECCCCCEEEECC
SGLLHIEAPPEWLVQQGGLFHGIQLWVNLPRDAKMNDPRYQDIRSGSVQLLTSADAGALV
CCEEEEECCHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCCCEE
RVIAGTVDGHAGPGSTYTPMSLVHATVEPGARLDLPWNVDFNALVYVLNGAGTVGTDAHP
EEEECCCCCCCCCCCCCCHHHHEEEECCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCC
VHTGQAAVLGAGDYLTVAANPRQEGRSPKLDVIVVGGQPIREPLAWAGPFVMNTKSEVMQ
EECCCEEEEECCCEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHCCCEEECCHHHHHH
AYEDFQHGRFGHIPG
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]