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The map label for this gene is yhfW [H]

Identifier: 119715571

GI number: 119715571

Start: 1404642

End: 1406141

Strand: Reverse

Name: yhfW [H]

Synonym: Noca_1335

Alternate gene names: 119715571

Gene position: 1406141-1404642 (Counterclockwise)

Preceding gene: 119715572

Following gene: 119715570

Centisome position: 28.2

GC content: 75.33

Gene sequence:

>1500_bases
ATGGCTCTGACCTCCGTCTGGCGCGATCGGCACCCGGTCCGGTCTGCGACTCCCCCGGACGTCTCCGGCGAGTGGGACGT
CGTCGTGGTCGGCGCGGGCATCACCGGCCTCACCACGGCCGCTCTGCTCGCCCGAGCCGGCCGTTCGGTGCTCGTCGTCG
AGGCCCGGCACGTCGGCGCGGGCACCACCGGCGGCAGCACCGCCAAGGTGAGCGTGCAGCAGGGCACCCAGTTCTCACGG
GTCGCCCGCCGCCACCCCGTGTCCGTGCTGCGCAAGTACGCCGATGCCAACCTCGAGGCGCTCGCGTGGGTCGAGCGGTT
CTGCCGCGACCACGACGTGGCCCTCCAGCACCGGTCCGCCTGCGCCTACGCCACCACCACGGCCGGGGTCCGCTCGGCGC
GCTCGGAGCTGGAGGCCCTGCACCGGGCCGGTGTCGAGAAGGCCACCTGGGTCGACGACCTGCCCCTGCCGTTCCGGGTC
CGCGGCGCCGTCATGGTGCCCGACCAGCTCCAGCTGGACCCGCTCGACCTGCTGGACGCGCTCGCGGCCGACGCCCGGGC
GCACGGGGCGACCATCGTCGAGGGCGCGCGGGTGCACCGGGTCCACGGGGGCCACGGGTCGGCGCCGTACGACGTCGTCA
CCGATGTCGGCAGCGCCGGCGCCGGCACCGTCGTGCTGGCGACGAACATGCCGATCCTGGACCGGGGCGCCTTCTTCGCC
CGTGCGAAGCCGGCTCGCTCGTACGGGCTGGCGTTCCGCACCCCCGAGCAGGCCGTCGACGGCATGTACCTCTCGGTCGA
CGGGCCGGCCCGCTCGCTTCGGGACACGCCGGCCCCCGACGGCAGCCTGCTGCTGGTGGGCGGCGACGGGCACAAGACCG
GAGCCGCCACGTCCGAGGAGAGCCACCTCGACGGCCTGCGCCAGTGGACGCTGGGCCACTTCCCCGACGCCGTCGAGACG
CACGCCTGGTCGGCACAGGACTACGTCCCGCACCACGCGCTGCCCTGGGTGGGACCGATCCTGCCCGGCAGCGACCGGCT
CCTCGTCGCGGGCGGGTACTCGAAGTGGGGCATGACGAACGGCGTCGCGGCCGCGCTCGCACTGGCCGGGCGGATCCTCG
ACGGGCACCAGCAGTGGGCGTCCGCCTTCGACCCGTGGAGCACCCGCGAGCTGGCGGGACTGCCCGCGAGCGCACGCCTC
AACGCCTCGGTGGCCGTCGAGCTGACCACCGGGTGGCTGCGGCCGCTGCTCACGCTCGGGTCCGGCACCGTCGCCGAGGG
CGTCGGTGAGGTCCGCCTGGACCGGGTCGGGACGCCGACGGCGGTGTGCCGGGTCGACGGGGTCGAGCACGCCGTCTCCG
CCGTCTGCAGCCACCTCGGCGGGATCGTGCGTTGGAACGACGCCGAGCGCAGCTGGGACTGCCCCCTGCACGGGTCGCGC
TTCGACCCGGAAGGACGCGTGCTCGAGGGGCCGGCGACCTGCGGGCTGCGCCGGCGCTGA

Upstream 100 bases:

>100_bases
ATCGACAAGGCGCGGGAGAAGGACGAGGCCGACGAGCGCCGCGGCCGGAGGATCCGGCTGCGGGCCCGCCGTACCCACGC
CCGCCGCGGGAAGGACTGAC

Downstream 100 bases:

>100_bases
CCCCGCGCTGACCCCGCGCTGACCCGGCGCTGGCCCCGCGCTGACCAGGGAGAACCCGGGTTCTCCTGCAAGTTCCTCAA
GGAACTCACAAGGTTCGTCC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MALTSVWRDRHPVRSATPPDVSGEWDVVVVGAGITGLTTAALLARAGRSVLVVEARHVGAGTTGGSTAKVSVQQGTQFSR
VARRHPVSVLRKYADANLEALAWVERFCRDHDVALQHRSACAYATTTAGVRSARSELEALHRAGVEKATWVDDLPLPFRV
RGAVMVPDQLQLDPLDLLDALAADARAHGATIVEGARVHRVHGGHGSAPYDVVTDVGSAGAGTVVLATNMPILDRGAFFA
RAKPARSYGLAFRTPEQAVDGMYLSVDGPARSLRDTPAPDGSLLLVGGDGHKTGAATSEESHLDGLRQWTLGHFPDAVET
HAWSAQDYVPHHALPWVGPILPGSDRLLVAGGYSKWGMTNGVAAALALAGRILDGHQQWASAFDPWSTRELAGLPASARL
NASVAVELTTGWLRPLLTLGSGTVAEGVGEVRLDRVGTPTAVCRVDGVEHAVSAVCSHLGGIVRWNDAERSWDCPLHGSR
FDPEGRVLEGPATCGLRRR

Sequences:

>Translated_499_residues
MALTSVWRDRHPVRSATPPDVSGEWDVVVVGAGITGLTTAALLARAGRSVLVVEARHVGAGTTGGSTAKVSVQQGTQFSR
VARRHPVSVLRKYADANLEALAWVERFCRDHDVALQHRSACAYATTTAGVRSARSELEALHRAGVEKATWVDDLPLPFRV
RGAVMVPDQLQLDPLDLLDALAADARAHGATIVEGARVHRVHGGHGSAPYDVVTDVGSAGAGTVVLATNMPILDRGAFFA
RAKPARSYGLAFRTPEQAVDGMYLSVDGPARSLRDTPAPDGSLLLVGGDGHKTGAATSEESHLDGLRQWTLGHFPDAVET
HAWSAQDYVPHHALPWVGPILPGSDRLLVAGGYSKWGMTNGVAAALALAGRILDGHQQWASAFDPWSTRELAGLPASARL
NASVAVELTTGWLRPLLTLGSGTVAEGVGEVRLDRVGTPTAVCRVDGVEHAVSAVCSHLGGIVRWNDAERSWDCPLHGSR
FDPEGRVLEGPATCGLRRR
>Mature_498_residues
ALTSVWRDRHPVRSATPPDVSGEWDVVVVGAGITGLTTAALLARAGRSVLVVEARHVGAGTTGGSTAKVSVQQGTQFSRV
ARRHPVSVLRKYADANLEALAWVERFCRDHDVALQHRSACAYATTTAGVRSARSELEALHRAGVEKATWVDDLPLPFRVR
GAVMVPDQLQLDPLDLLDALAADARAHGATIVEGARVHRVHGGHGSAPYDVVTDVGSAGAGTVVLATNMPILDRGAFFAR
AKPARSYGLAFRTPEQAVDGMYLSVDGPARSLRDTPAPDGSLLLVGGDGHKTGAATSEESHLDGLRQWTLGHFPDAVETH
AWSAQDYVPHHALPWVGPILPGSDRLLVAGGYSKWGMTNGVAAALALAGRILDGHQQWASAFDPWSTRELAGLPASARLN
ASVAVELTTGWLRPLLTLGSGTVAEGVGEVRLDRVGTPTAVCRVDGVEHAVSAVCSHLGGIVRWNDAERSWDCPLHGSRF
DPEGRVLEGPATCGLRRR

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 52787; Mature: 52656

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTSVWRDRHPVRSATPPDVSGEWDVVVVGAGITGLTTAALLARAGRSVLVVEARHVGA
CCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCC
GTTGGSTAKVSVQQGTQFSRVARRHPVSVLRKYADANLEALAWVERFCRDHDVALQHRSA
CCCCCCEEEEEHHCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCC
CAYATTTAGVRSARSELEALHRAGVEKATWVDDLPLPFRVRGAVMVPDQLQLDPLDLLDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEECCCCCCCCHHHHHHH
LAADARAHGATIVEGARVHRVHGGHGSAPYDVVTDVGSAGAGTVVLATNMPILDRGAFFA
HHHHHHHCCCEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCEEEEEECCCEECCCCHHC
RAKPARSYGLAFRTPEQAVDGMYLSVDGPARSLRDTPAPDGSLLLVGGDGHKTGAATSEE
CCCCCHHCCCEEECHHHHHCCEEEEECCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCH
SHLDGLRQWTLGHFPDAVETHAWSAQDYVPHHALPWVGPILPGSDRLLVAGGYSKWGMTN
HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH
GVAAALALAGRILDGHQQWASAFDPWSTRELAGLPASARLNASVAVELTTGWLRPLLTLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEECHHHHHHHHHCC
SGTVAEGVGEVRLDRVGTPTAVCRVDGVEHAVSAVCSHLGGIVRWNDAERSWDCPLHGSR
CCHHHHCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
FDPEGRVLEGPATCGLRRR
CCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
ALTSVWRDRHPVRSATPPDVSGEWDVVVVGAGITGLTTAALLARAGRSVLVVEARHVGA
CCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCC
GTTGGSTAKVSVQQGTQFSRVARRHPVSVLRKYADANLEALAWVERFCRDHDVALQHRSA
CCCCCCEEEEEHHCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCC
CAYATTTAGVRSARSELEALHRAGVEKATWVDDLPLPFRVRGAVMVPDQLQLDPLDLLDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEECCCCCCCCHHHHHHH
LAADARAHGATIVEGARVHRVHGGHGSAPYDVVTDVGSAGAGTVVLATNMPILDRGAFFA
HHHHHHHCCCEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCEEEEEECCCEECCCCHHC
RAKPARSYGLAFRTPEQAVDGMYLSVDGPARSLRDTPAPDGSLLLVGGDGHKTGAATSEE
CCCCCHHCCCEEECHHHHHCCEEEEECCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCH
SHLDGLRQWTLGHFPDAVETHAWSAQDYVPHHALPWVGPILPGSDRLLVAGGYSKWGMTN
HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH
GVAAALALAGRILDGHQQWASAFDPWSTRELAGLPASARLNASVAVELTTGWLRPLLTLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEECHHHHHHHHHCC
SGTVAEGVGEVRLDRVGTPTAVCRVDGVEHAVSAVCSHLGGIVRWNDAERSWDCPLHGSR
CCHHHHCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
FDPEGRVLEGPATCGLRRR
CCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]