| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715570
Identifier: 119715570
GI number: 119715570
Start: 1403315
End: 1404448
Strand: Reverse
Name: 119715570
Synonym: Noca_1334
Alternate gene names: NA
Gene position: 1404448-1403315 (Counterclockwise)
Preceding gene: 119715571
Following gene: 119715562
Centisome position: 28.17
GC content: 72.05
Gene sequence:
>1134_bases GTGCGAGCACGACTCGTCTGCGCCGCTGCCGCCGCCACCCTGCCTGCCGTCCTGGCGCTGGGTGGCACGCCGGCCCTGGC CGACCCGAGCGGCAACAACGGCACGATCAAGGTCGCCGAGGTCGACCAGGTCGGGACCGAGAGCAACGACCCGCACGTCG GCTGCACGTTCGCGCTGGAGTGGTACGGCTTCGACGCCGGAGCCGGCTCGGTGGTGACCTTCGAGAGCCAGGACCACGAC GTCACGATCACCGGCGTGCACGGCCGGACCACCGTGGAGCTCGAGGACGACTCGGCCAACGGCGGCACCGACCTCGACGG CCGCGAGATCTACACGCTCGACTTCGCCGGCGAGCCGCACCCCGAGCAGGGCTACCACGTCAAGGTGACCACCGACACCG AGGGCTCGCGCGGCAACGACACGAAGTCCAAGGTCTTTTGGGTCGGCCCGTGCGGGACCGACGAGGACAGCGACGACGAC GGCGCCACCGAGACCGGGCCGGGCAGCAGCACGCCCTTCACCTGGGACTGGCGGTACGCCGATCCCACGTGCGGCGGCCT GAGCGTCGCCTACCCGCCCGACATCCCGAGCGGCCAGGCCAACGACGTCAACGTCCGGTTCGAGACCGACCACGGCCAGG TGACCCTGAACTTCCACAACGACACCGGCACCTGGGGCGGGACGACGTTCTTCGACTTCGCCGGCCACCGGAACTGGCCG GCCGGGCTGGCGTCGTACGACGTCACCTGGGTCCAGGTCGCCGGCACCAACTACCACTGGCAGGGCGACGTGTCCTGCCG CACCGACGGCGACCCGGACACCCCGGACGTCCCGCAGGAGGTCGTGGGGCTGGACGGCTTCACCACCGGGACGCTCAGCC TGCGGCGCGGTGCGACCGTCCCGGCCGACACCGTCGACGTCGACAACTCCGCAGCCGGGGCCGTGACCCTGGAGCGCTAC GTCGGGGGCACCTGGATCGCCGCCCGCAGCTTCGCGACCACCAGCCGGGGCACCGCCCGGGTCACCTTCCCCCGCCTGAC CCAGCGGGGCACCTACACCTACCGCCTGACCGTGTCCCGGACGCTCGACACGACCGGCGACACGACGGGGACGCTCAACG TCCGGGTCCGCTGA
Upstream 100 bases:
>100_bases TTCGTCCACGGCTCGGGAACGGTTCGTGCACCGAGCCGTTCCGGGGCAGTCCGGCGTGCCACGCTCCTCCTGTCACCCGC TGATCCCGAGGAGCCCCACC
Downstream 100 bases:
>100_bases CCCGGGAGCGTGCCGACGGCCGGCGTCCGGTGCCTGAGGGGGGCCACCGGCCGCCGGCCGTGTCTCGCCGCGCGGGCTTC ATCAGCCCCGCACGACGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MRARLVCAAAAATLPAVLALGGTPALADPSGNNGTIKVAEVDQVGTESNDPHVGCTFALEWYGFDAGAGSVVTFESQDHD VTITGVHGRTTVELEDDSANGGTDLDGREIYTLDFAGEPHPEQGYHVKVTTDTEGSRGNDTKSKVFWVGPCGTDEDSDDD GATETGPGSSTPFTWDWRYADPTCGGLSVAYPPDIPSGQANDVNVRFETDHGQVTLNFHNDTGTWGGTTFFDFAGHRNWP AGLASYDVTWVQVAGTNYHWQGDVSCRTDGDPDTPDVPQEVVGLDGFTTGTLSLRRGATVPADTVDVDNSAAGAVTLERY VGGTWIAARSFATTSRGTARVTFPRLTQRGTYTYRLTVSRTLDTTGDTTGTLNVRVR
Sequences:
>Translated_377_residues MRARLVCAAAAATLPAVLALGGTPALADPSGNNGTIKVAEVDQVGTESNDPHVGCTFALEWYGFDAGAGSVVTFESQDHD VTITGVHGRTTVELEDDSANGGTDLDGREIYTLDFAGEPHPEQGYHVKVTTDTEGSRGNDTKSKVFWVGPCGTDEDSDDD GATETGPGSSTPFTWDWRYADPTCGGLSVAYPPDIPSGQANDVNVRFETDHGQVTLNFHNDTGTWGGTTFFDFAGHRNWP AGLASYDVTWVQVAGTNYHWQGDVSCRTDGDPDTPDVPQEVVGLDGFTTGTLSLRRGATVPADTVDVDNSAAGAVTLERY VGGTWIAARSFATTSRGTARVTFPRLTQRGTYTYRLTVSRTLDTTGDTTGTLNVRVR >Mature_377_residues MRARLVCAAAAATLPAVLALGGTPALADPSGNNGTIKVAEVDQVGTESNDPHVGCTFALEWYGFDAGAGSVVTFESQDHD VTITGVHGRTTVELEDDSANGGTDLDGREIYTLDFAGEPHPEQGYHVKVTTDTEGSRGNDTKSKVFWVGPCGTDEDSDDD GATETGPGSSTPFTWDWRYADPTCGGLSVAYPPDIPSGQANDVNVRFETDHGQVTLNFHNDTGTWGGTTFFDFAGHRNWP AGLASYDVTWVQVAGTNYHWQGDVSCRTDGDPDTPDVPQEVVGLDGFTTGTLSLRRGATVPADTVDVDNSAAGAVTLERY VGGTWIAARSFATTSRGTARVTFPRLTQRGTYTYRLTVSRTLDTTGDTTGTLNVRVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40019; Mature: 40019
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARLVCAAAAATLPAVLALGGTPALADPSGNNGTIKVAEVDQVGTESNDPHVGCTFALE CCCEEEEEHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCEEEEEEEEE WYGFDAGAGSVVTFESQDHDVTITGVHGRTTVELEDDSANGGTDLDGREIYTLDFAGEPH EEEECCCCCCEEEEECCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC PEQGYHVKVTTDTEGSRGNDTKSKVFWVGPCGTDEDSDDDGATETGPGSSTPFTWDWRYA CCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC DPTCGGLSVAYPPDIPSGQANDVNVRFETDHGQVTLNFHNDTGTWGGTTFFDFAGHRNWP CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCC AGLASYDVTWVQVAGTNYHWQGDVSCRTDGDPDTPDVPQEVVGLDGFTTGTLSLRRGATV CCCCCCCEEEEEEECCCEEEECCEEEECCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCC PADTVDVDNSAAGAVTLERYVGGTWIAARSFATTSRGTARVTFPRLTQRGTYTYRLTVSR CCCEEECCCCCCCEEEEEHHCCCEEEEEEEEECCCCCEEEEEECHHHCCCCEEEEEEEEE TLDTTGDTTGTLNVRVR EECCCCCCCEEEEEEEC >Mature Secondary Structure MRARLVCAAAAATLPAVLALGGTPALADPSGNNGTIKVAEVDQVGTESNDPHVGCTFALE CCCEEEEEHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCEEEEEEEEE WYGFDAGAGSVVTFESQDHDVTITGVHGRTTVELEDDSANGGTDLDGREIYTLDFAGEPH EEEECCCCCCEEEEECCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC PEQGYHVKVTTDTEGSRGNDTKSKVFWVGPCGTDEDSDDDGATETGPGSSTPFTWDWRYA CCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC DPTCGGLSVAYPPDIPSGQANDVNVRFETDHGQVTLNFHNDTGTWGGTTFFDFAGHRNWP CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCC AGLASYDVTWVQVAGTNYHWQGDVSCRTDGDPDTPDVPQEVVGLDGFTTGTLSLRRGATV CCCCCCCEEEEEEECCCEEEECCEEEECCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCC PADTVDVDNSAAGAVTLERYVGGTWIAARSFATTSRGTARVTFPRLTQRGTYTYRLTVSR CCCEEECCCCCCCEEEEEHHCCCEEEEEEEEECCCCCEEEEEECHHHCCCCEEEEEEEEE TLDTTGDTTGTLNVRVR EECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA