| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715568
Identifier: 119715568
GI number: 119715568
Start: 1400450
End: 1400794
Strand: Direct
Name: 119715568
Synonym: Noca_1332
Alternate gene names: NA
Gene position: 1400450-1400794 (Clockwise)
Preceding gene: 119715567
Following gene: 119715569
Centisome position: 28.09
GC content: 73.04
Gene sequence:
>345_bases GTGGCCAAGCTGACCACCGCGGGCGCCGACAAGACGCCTATCAAGATGCTGCACGACCGCCTCCTCGTCGAGGTCGACCG CGAGTCGGGCGAGCGCCGCTCCTCGGGCGGCATCGTGATCCCGGCCACGGCCGCGATGGGTGCCCGCCGGCTGGCCTGGT CGAAGGTCGTCGCGGTCGGCCCGCACGCCCGGGCCGTCGAGGTGGGCGACCGGGTGCTCTTCGAGCCCGAGGACAAGGCC GAGGTCGAGGTCGCTGGGGAGCTGTACGTCGTCATGCGTGAGCGCGACGTCCACGCCGTCGCGGCCGACCGGGTCGGCGA CAGCGCCACCGGGCTGTACCTGTAA
Upstream 100 bases:
>100_bases GACCGGCCGGCCGCGGACCGACAACATCCTCAAGACCGCAGGCGTCGTCGTGGGTGTGGTCACCTTCTTCGTCGTCGTCC GGAAGGTCGTGCGCTAGGCC
Downstream 100 bases:
>100_bases CGGTCGTAACCCGCCGGTAACCCCGGCCGTTGAGCGGTCATGCTCCGCCGCCTGCTCGCCGCCACCGCCGCCGCCGCCCT CGTCCCCCTCACCGGGTCCG
Product: chaperonin Cpn10
Products: NA
Alternate protein names: GroES-Family Molecular Chaperone; Chaperonin GroS; GroES Family Molecular Chaperone; 10 KDa Chaperonin; Co-Chaperonin GroES; 10kD Chaperone Subunit
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MAKLTTAGADKTPIKMLHDRLLVEVDRESGERRSSGGIVIPATAAMGARRLAWSKVVAVGPHARAVEVGDRVLFEPEDKA EVEVAGELYVVMRERDVHAVAADRVGDSATGLYL
Sequences:
>Translated_114_residues MAKLTTAGADKTPIKMLHDRLLVEVDRESGERRSSGGIVIPATAAMGARRLAWSKVVAVGPHARAVEVGDRVLFEPEDKA EVEVAGELYVVMRERDVHAVAADRVGDSATGLYL >Mature_113_residues AKLTTAGADKTPIKMLHDRLLVEVDRESGERRSSGGIVIPATAAMGARRLAWSKVVAVGPHARAVEVGDRVLFEPEDKAE VEVAGELYVVMRERDVHAVAADRVGDSATGLYL
Specific function: Unknown
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12237; Mature: 12106
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLTTAGADKTPIKMLHDRLLVEVDRESGERRSSGGIVIPATAAMGARRLAWSKVVAVG CCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCEEEECHHHCCCHHHHHHEEEEEC PHARAVEVGDRVLFEPEDKAEVEVAGELYVVMRERDVHAVAADRVGDSATGLYL CCCEEEECCCEEEECCCCCCEEEECCEEEEEEECCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure AKLTTAGADKTPIKMLHDRLLVEVDRESGERRSSGGIVIPATAAMGARRLAWSKVVAVG CCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCEEEECHHHCCCHHHHHHEEEEEC PHARAVEVGDRVLFEPEDKAEVEVAGELYVVMRERDVHAVAADRVGDSATGLYL CCCEEEECCCEEEECCCCCCEEEECCEEEEEEECCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA