Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715502

Identifier: 119715502

GI number: 119715502

Start: 1340525

End: 1341166

Strand: Reverse

Name: 119715502

Synonym: Noca_1266

Alternate gene names: NA

Gene position: 1341166-1340525 (Counterclockwise)

Preceding gene: 119715513

Following gene: 119715497

Centisome position: 26.9

GC content: 78.66

Gene sequence:

>642_bases
GTGCCCCTTCCGCGTGCTCCATCCGTGGCCCCGCTCACGGGGCTGCTCACGGGCCTGCTGGCCGGTCTGCTGGCGCTCAC
GACCGCGTGCGAGGGCGATGCTCCCGAACCGCGCCCCCCGCTGGACTCCGCCGCGCCGCTGGCCGAGCTGGCGACCGACA
CCATGACGGTGGCCCGCGAAGACTTCTGCGCCCGGGTGGCGCCGGCCGCGGTCGAGGAGGCGCTCGGCGCCGCCCCCGCC
GACGAGCACGCGTGGGCGAACGGTGAGCGGGCCACGCTCGCGCCCGGCCTGACCGACGTCGCCCACGAGTACGGCTGCCG
CTGGTCGGCGGACGGTACGACGGTCCGCGCGTGGGTGTTCGCGCCACCGGTGACCGCCGGCCAGGCCGAGTACCTGCGGC
GCGCGGCCACGCGGCCGGAGGGCTGCGCGCCGGTCACCGGCGCGCCGCGGTTCGGGTCACGCGGGGTGGCGGTGCGTTGC
TCGGGCGGCGCCGGCGGGGTCACCGCGTTCCACGGGCTGTTCGGCGATGCCTGGCTGTCCTGCTCCGTGGAGACCTCGGG
GGCCGAGCCGGGACCGCCGGGCGAGGCGCTGGACCGCGCCAGCGGCTGGTGCGCGACGGTCCTGCAGGCGGCGGCCGCCT
GA

Upstream 100 bases:

>100_bases
GCGCTCGGCGCCCAGCCCGCCCAGGAGGGCGGCGGCTGCGGCCTGGACGTCGGCGGGAGCGCTCATCCCCCGCATTCAAG
CACCCCCGTAGGTTGTCCTC

Downstream 100 bases:

>100_bases
CTCCTCGTCGTCGCGGCCGCGCGGGCTCAGCCGGTAGACGCCTCCCGATCGTGGCGGACCGGGCAGCCGGCGACGCCGGG
CACCGGGAAGGTGCCGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MPLPRAPSVAPLTGLLTGLLAGLLALTTACEGDAPEPRPPLDSAAPLAELATDTMTVAREDFCARVAPAAVEEALGAAPA
DEHAWANGERATLAPGLTDVAHEYGCRWSADGTTVRAWVFAPPVTAGQAEYLRRAATRPEGCAPVTGAPRFGSRGVAVRC
SGGAGGVTAFHGLFGDAWLSCSVETSGAEPGPPGEALDRASGWCATVLQAAAA

Sequences:

>Translated_213_residues
MPLPRAPSVAPLTGLLTGLLAGLLALTTACEGDAPEPRPPLDSAAPLAELATDTMTVAREDFCARVAPAAVEEALGAAPA
DEHAWANGERATLAPGLTDVAHEYGCRWSADGTTVRAWVFAPPVTAGQAEYLRRAATRPEGCAPVTGAPRFGSRGVAVRC
SGGAGGVTAFHGLFGDAWLSCSVETSGAEPGPPGEALDRASGWCATVLQAAAA
>Mature_212_residues
PLPRAPSVAPLTGLLTGLLAGLLALTTACEGDAPEPRPPLDSAAPLAELATDTMTVAREDFCARVAPAAVEEALGAAPAD
EHAWANGERATLAPGLTDVAHEYGCRWSADGTTVRAWVFAPPVTAGQAEYLRRAATRPEGCAPVTGAPRFGSRGVAVRCS
GGAGGVTAFHGLFGDAWLSCSVETSGAEPGPPGEALDRASGWCATVLQAAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21471; Mature: 21340

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPRAPSVAPLTGLLTGLLAGLLALTTACEGDAPEPRPPLDSAAPLAELATDTMTVARE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DFCARVAPAAVEEALGAAPADEHAWANGERATLAPGLTDVAHEYGCRWSADGTTVRAWVF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCEECCCCCEEEEEEE
APPVTAGQAEYLRRAATRPEGCAPVTGAPRFGSRGVAVRCSGGAGGVTAFHGLFGDAWLS
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEE
CSVETSGAEPGPPGEALDRASGWCATVLQAAAA
EEEECCCCCCCCCHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure 
PLPRAPSVAPLTGLLTGLLAGLLALTTACEGDAPEPRPPLDSAAPLAELATDTMTVARE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DFCARVAPAAVEEALGAAPADEHAWANGERATLAPGLTDVAHEYGCRWSADGTTVRAWVF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCEECCCCCEEEEEEE
APPVTAGQAEYLRRAATRPEGCAPVTGAPRFGSRGVAVRCSGGAGGVTAFHGLFGDAWLS
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEE
CSVETSGAEPGPPGEALDRASGWCATVLQAAAA
EEEECCCCCCCCCHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA