| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is senX3 [H]
Identifier: 119715498
GI number: 119715498
Start: 1335593
End: 1337560
Strand: Direct
Name: senX3 [H]
Synonym: Noca_1262
Alternate gene names: 119715498
Gene position: 1335593-1337560 (Clockwise)
Preceding gene: 119715496
Following gene: 119715499
Centisome position: 26.79
GC content: 74.9
Gene sequence:
>1968_bases GTGGGCGAGGAACTGGGGTCGGATCCGGGTGGATCGGGCCGGCGTCCGACGATCGTGATCGTCGACGACGCCGCCGACGT CCGCACGCTGGTCCGCAGCCGGTTGCGCCTCTCCGGCCGGCTCGAGGTGGTCGGCGAGGGGTCGACCGGCGTCGAGGCGG TCGACGCGGCCCGGCGGCACCGGCCGGACCTACTGCTCCTCGACGTCTCGATGCCGGAGATGGACGGCCTGGTCGCCCTG CCCCTGATCCTCGACGTCTCGCCCGGGACCCGGGTGGCGATGTACAGCGGCTTCTCCGAGGACGGCCTGGCGCACCGGGC GGTCGCGCTGGGGGCCGCCGCCTTCCTGGAGAAGTCCACGCCGCTGGAGAGGCTGGTCGACCAGCTGGTGGCGCTGCTCG ACGCCGGGCCCGTCGCCCCGGTCGAGCGCAGCGGCCCCGAGGTCGACGAGCGGGACCGCACGGTCCTGCACGAGCACCAG GAGCGGTTCCGCGAGGTCTTCGACGACGCGGCCATCGGCATGGCCACGGTCACCCTGGCCGGACAGGTGGTCCGCGCCAA CGCCGCGCTGGCCGCGCTCCTCGGCCGCCGCGTCGAGAGCCTGGTCGGGCTTCCGTACGCCGACCTCACCGGCGGCCGCG CCGACCTCGTCGCCGACGCCCTGGCCCAGATCCTCGACGGCCGCAGCCGGGTCGTGCAGCTCGAGCACGACGTCACGGGC GCGACCCCGCCGCGCCGGGTGATGGCGACGGTCGCCCCGGTCCTGGACAGCAACGGCCGGCCGCTCTACCTGTTCTGGCA GGTCCAGGACGTCACGGCCCAGCGTGCGGCCGAGGAGGAGCTGCGCCGCAGCGAGGCACGGTTCCGGCTGCTGGTGGAGA ACGTCGAGGACTACGCGATCTTCATGCTCTCCCCGGAAGGGCTCGTGGAGAGCTGGAACGCCGGGGCCCAGCGGATCAAG GGCTACACCGCGAGCGAGATCGTCGGCCGGCACTTCCGCACCTTCTACCCGCCCGAGGTGCAGGAGGCCCGGCACCCCGA GCACGAGCTCGAGCTCGCGCTGCGCGACGGCCACTACGAGGAGGAGGGCTGGCGGGTCCGCAAGGACGGCGGCCGGTTCT GGGCCAACGTGCTGATCACCGCCGTCCACGACCAGACGGGCCGGCACATCGGCTTCGCGAAGATCACCCGGGACAACACC GAGCGACGCGAGATGCTCGAGGGCCGCGAGGCCGCCGCCGGCGCGCTCGCCGAGGCCAACGCCCAGCTCCAGCAGGCGGC CGAGGACCAGGCCCACTTCCTCGCCGTGACTGCGCACGAGCTGCGCACTCCCGTCGGCGTCCTCGCCGGCACGGCGGAGA TGCTGGCCGCGCACGCCGACGAGCTCGACGCCGAGGAGCGGCACGAGCTGCTCGAGGGCATGGGCTCCAGCGCCGCCCGG CTCCGCCGCCTGCTCGCCGACCTGCTGACCGCCTCCCGCCTCCAGGCCAGCGCCCTCGAGCTCGACGTCGAGACCGTCGA CGTCGGTGCCCTTCTCGACACCGCGGCCGCGGCCGCCCGTCGCGCCCACCCGGGCGCGGAGATCGAGGCCACCGCCGAGC CCGGGCTCCTGGTCGAGGGCGACCGCGACCGGCTCGGGCAGGCCGTGGACAACTTGGTCGCCAACGCCCTGCGCCACGGG AGCCCGCCGGTGCTGGTGTGGGCCCGGGCGGCGGGCACCGACCCGGACACGGTCGAGATCGAGGTCCGCGACGCCGGGCC GGGGGTCAGCGAGGAGATGCGCGAGCGGCTCTTCGACCGGTTCGCGACCGGTCGCAGCGGCGGTGGGACCGGTCTCGGGC TCTACATCGTGCGCCAGCTGGCCCGCTCCCACGACGGGGAGGCGACGTACCGTCCCGGTGGCGCCGACGGCACCGGCGGC TCGTTCGTGCTCACCCTGCCGCGCTCGGGTGCCGATGCGCTCGGCTGA
Upstream 100 bases:
>100_bases GCTGCACAAACCTGCACAACTCCCGCAGAAGTTCCCAGAAGTCGATCGCTGGGCCGCGACATCGGTGCCCCCGCTGGGTT AGGTTCCCCTGGTGTCCGGG
Downstream 100 bases:
>100_bases CCGGGGGGCGAGGCGCCGGCCGACGCGCGGACGCGGACGGCCCCGGGTGCGTGCCACGGAGGAGTTGAGCGCCTACGCTT CCATCGTGCCCATCCGCGTC
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 655; Mature: 654
Protein sequence:
>655_residues MGEELGSDPGGSGRRPTIVIVDDAADVRTLVRSRLRLSGRLEVVGEGSTGVEAVDAARRHRPDLLLLDVSMPEMDGLVAL PLILDVSPGTRVAMYSGFSEDGLAHRAVALGAAAFLEKSTPLERLVDQLVALLDAGPVAPVERSGPEVDERDRTVLHEHQ ERFREVFDDAAIGMATVTLAGQVVRANAALAALLGRRVESLVGLPYADLTGGRADLVADALAQILDGRSRVVQLEHDVTG ATPPRRVMATVAPVLDSNGRPLYLFWQVQDVTAQRAAEEELRRSEARFRLLVENVEDYAIFMLSPEGLVESWNAGAQRIK GYTASEIVGRHFRTFYPPEVQEARHPEHELELALRDGHYEEEGWRVRKDGGRFWANVLITAVHDQTGRHIGFAKITRDNT ERREMLEGREAAAGALAEANAQLQQAAEDQAHFLAVTAHELRTPVGVLAGTAEMLAAHADELDAEERHELLEGMGSSAAR LRRLLADLLTASRLQASALELDVETVDVGALLDTAAAAARRAHPGAEIEATAEPGLLVEGDRDRLGQAVDNLVANALRHG SPPVLVWARAAGTDPDTVEIEVRDAGPGVSEEMRERLFDRFATGRSGGGTGLGLYIVRQLARSHDGEATYRPGGADGTGG SFVLTLPRSGADALG
Sequences:
>Translated_655_residues MGEELGSDPGGSGRRPTIVIVDDAADVRTLVRSRLRLSGRLEVVGEGSTGVEAVDAARRHRPDLLLLDVSMPEMDGLVAL PLILDVSPGTRVAMYSGFSEDGLAHRAVALGAAAFLEKSTPLERLVDQLVALLDAGPVAPVERSGPEVDERDRTVLHEHQ ERFREVFDDAAIGMATVTLAGQVVRANAALAALLGRRVESLVGLPYADLTGGRADLVADALAQILDGRSRVVQLEHDVTG ATPPRRVMATVAPVLDSNGRPLYLFWQVQDVTAQRAAEEELRRSEARFRLLVENVEDYAIFMLSPEGLVESWNAGAQRIK GYTASEIVGRHFRTFYPPEVQEARHPEHELELALRDGHYEEEGWRVRKDGGRFWANVLITAVHDQTGRHIGFAKITRDNT ERREMLEGREAAAGALAEANAQLQQAAEDQAHFLAVTAHELRTPVGVLAGTAEMLAAHADELDAEERHELLEGMGSSAAR LRRLLADLLTASRLQASALELDVETVDVGALLDTAAAAARRAHPGAEIEATAEPGLLVEGDRDRLGQAVDNLVANALRHG SPPVLVWARAAGTDPDTVEIEVRDAGPGVSEEMRERLFDRFATGRSGGGTGLGLYIVRQLARSHDGEATYRPGGADGTGG SFVLTLPRSGADALG >Mature_654_residues GEELGSDPGGSGRRPTIVIVDDAADVRTLVRSRLRLSGRLEVVGEGSTGVEAVDAARRHRPDLLLLDVSMPEMDGLVALP LILDVSPGTRVAMYSGFSEDGLAHRAVALGAAAFLEKSTPLERLVDQLVALLDAGPVAPVERSGPEVDERDRTVLHEHQE RFREVFDDAAIGMATVTLAGQVVRANAALAALLGRRVESLVGLPYADLTGGRADLVADALAQILDGRSRVVQLEHDVTGA TPPRRVMATVAPVLDSNGRPLYLFWQVQDVTAQRAAEEELRRSEARFRLLVENVEDYAIFMLSPEGLVESWNAGAQRIKG YTASEIVGRHFRTFYPPEVQEARHPEHELELALRDGHYEEEGWRVRKDGGRFWANVLITAVHDQTGRHIGFAKITRDNTE RREMLEGREAAAGALAEANAQLQQAAEDQAHFLAVTAHELRTPVGVLAGTAEMLAAHADELDAEERHELLEGMGSSAARL RRLLADLLTASRLQASALELDVETVDVGALLDTAAAAARRAHPGAEIEATAEPGLLVEGDRDRLGQAVDNLVANALRHGS PPVLVWARAAGTDPDTVEIEVRDAGPGVSEEMRERLFDRFATGRSGGGTGLGLYIVRQLARSHDGEATYRPGGADGTGGS FVLTLPRSGADALG
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=392, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1789149, Length=271, Percent_Identity=30.9963099630996, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1788393, Length=255, Percent_Identity=32.5490196078431, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1788713, Length=261, Percent_Identity=25.6704980842912, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI48994928, Length=411, Percent_Identity=22.3844282238443, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI145693157, Length=287, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1788549, Length=387, Percent_Identity=25.3229974160207, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790346, Length=226, Percent_Identity=33.6283185840708, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1789808, Length=216, Percent_Identity=29.6296296296296, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790436, Length=223, Percent_Identity=30.4932735426009, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786783, Length=227, Percent_Identity=28.6343612334802, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI87082128, Length=238, Percent_Identity=31.5126050420168, Blast_Score=76, Evalue=8e-15, Organism=Escherichia coli, GI1786912, Length=238, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87081816, Length=241, Percent_Identity=31.5352697095436, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787894, Length=220, Percent_Identity=30.9090909090909, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790861, Length=231, Percent_Identity=29.004329004329, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 70405; Mature: 70274
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEELGSDPGGSGRRPTIVIVDDAADVRTLVRSRLRLSGRLEVVGEGSTGVEAVDAARRH CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHC RPDLLLLDVSMPEMDGLVALPLILDVSPGTRVAMYSGFSEDGLAHRAVALGAAAFLEKST CCCEEEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC PLERLVDQLVALLDAGPVAPVERSGPEVDERDRTVLHEHQERFREVFDDAAIGMATVTLA CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQVVRANAALAALLGRRVESLVGLPYADLTGGRADLVADALAQILDGRSRVVQLEHDVTG HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC ATPPRRVMATVAPVLDSNGRPLYLFWQVQDVTAQRAAEEELRRSEARFRLLVENVEDYAI CCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FMLSPEGLVESWNAGAQRIKGYTASEIVGRHFRTFYPPEVQEARHPEHELELALRDGHYE EEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCHHEEEEECCCCCC EEGWRVRKDGGRFWANVLITAVHDQTGRHIGFAKITRDNTERREMLEGREAAAGALAEAN CCCCEEECCCCCEEEHHHHHHEECCCCCEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHH AQLQQAAEDQAHFLAVTAHELRTPVGVLAGTAEMLAAHADELDAEERHELLEGMGSSAAR HHHHHHHHCCHHEEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH LRRLLADLLTASRLQASALELDVETVDVGALLDTAAAAARRAHPGAEIEATAEPGLLVEG HHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEC DRDRLGQAVDNLVANALRHGSPPVLVWARAAGTDPDTVEIEVRDAGPGVSEEMRERLFDR CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH FATGRSGGGTGLGLYIVRQLARSHDGEATYRPGGADGTGGSFVLTLPRSGADALG HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure GEELGSDPGGSGRRPTIVIVDDAADVRTLVRSRLRLSGRLEVVGEGSTGVEAVDAARRH CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHC RPDLLLLDVSMPEMDGLVALPLILDVSPGTRVAMYSGFSEDGLAHRAVALGAAAFLEKST CCCEEEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC PLERLVDQLVALLDAGPVAPVERSGPEVDERDRTVLHEHQERFREVFDDAAIGMATVTLA CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQVVRANAALAALLGRRVESLVGLPYADLTGGRADLVADALAQILDGRSRVVQLEHDVTG HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC ATPPRRVMATVAPVLDSNGRPLYLFWQVQDVTAQRAAEEELRRSEARFRLLVENVEDYAI CCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FMLSPEGLVESWNAGAQRIKGYTASEIVGRHFRTFYPPEVQEARHPEHELELALRDGHYE EEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCHHEEEEECCCCCC EEGWRVRKDGGRFWANVLITAVHDQTGRHIGFAKITRDNTERREMLEGREAAAGALAEAN CCCCEEECCCCCEEEHHHHHHEECCCCCEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHH AQLQQAAEDQAHFLAVTAHELRTPVGVLAGTAEMLAAHADELDAEERHELLEGMGSSAAR HHHHHHHHCCHHEEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH LRRLLADLLTASRLQASALELDVETVDVGALLDTAAAAARRAHPGAEIEATAEPGLLVEG HHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEC DRDRLGQAVDNLVANALRHGSPPVLVWARAAGTDPDTVEIEVRDAGPGVSEEMRERLFDR CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH FATGRSGGGTGLGLYIVRQLARSHDGEATYRPGGADGTGGSFVLTLPRSGADALG HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA