| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715494
Identifier: 119715494
GI number: 119715494
Start: 1331900
End: 1332349
Strand: Direct
Name: 119715494
Synonym: Noca_1258
Alternate gene names: NA
Gene position: 1331900-1332349 (Clockwise)
Preceding gene: 119715493
Following gene: 119715496
Centisome position: 26.71
GC content: 75.78
Gene sequence:
>450_bases GTGCCACGCCGTGACCGCACGGAGGCCGGCCAGGCCACGCTGCTGATCGTGGGCTTCGCGTTCGTGCTGGCGATGGGGGT CGCGCTGGTCGTCGACGCGTCCGCGGCCTACCTGCAGCGCCAGGGCCTGGACACCGTGGCCGACGGGGCGGCGCTGCGGG GCGCCGATCTGGGCGCCACCGGCCGCGAGGTCTACACGGGAGGAGTGCCGGAGGCTCGGCTCGAGCTGACGGCCGCGGCC GCCCGGGCCTCGGTCCACGACTACCTGGTCTCCTCCGGCGCGTACGCGTCGTACCCGGGCCTGAGCTTCACCGTCGACGT CGACCCGGACGCCGCCAGCGTCACCGTGCACGTGCGTGCCCCGCTGGACCTGCCGCTCACGGTCCCCGGCTCGCCAGAGG TCGCCGTCATCGGCGCCTCCGGGTCGGCGGTCGTGGTGCCCGAGCGGTGA
Upstream 100 bases:
>100_bases GACCTGCCGCTGCTGCCGGCCTTCCTCGGGGGCGGAGCGCCGAGCTTCGCGCTGGATGCCACGCACGCGGTGCCGATCGG GCAGTTCCAGGAGATCGACC
Downstream 100 bases:
>100_bases GCCGCTCGGGTCAGCCGACCGGGGCCACGAAACCCAGCCGGTACGGGTCGCGACCGCCGAGGTTCGGCTCGATCCACGAC GTGAATGCGAGCGCGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MPRRDRTEAGQATLLIVGFAFVLAMGVALVVDASAAYLQRQGLDTVADGAALRGADLGATGREVYTGGVPEARLELTAAA ARASVHDYLVSSGAYASYPGLSFTVDVDPDAASVTVHVRAPLDLPLTVPGSPEVAVIGASGSAVVVPER
Sequences:
>Translated_149_residues MPRRDRTEAGQATLLIVGFAFVLAMGVALVVDASAAYLQRQGLDTVADGAALRGADLGATGREVYTGGVPEARLELTAAA ARASVHDYLVSSGAYASYPGLSFTVDVDPDAASVTVHVRAPLDLPLTVPGSPEVAVIGASGSAVVVPER >Mature_148_residues PRRDRTEAGQATLLIVGFAFVLAMGVALVVDASAAYLQRQGLDTVADGAALRGADLGATGREVYTGGVPEARLELTAAAA RASVHDYLVSSGAYASYPGLSFTVDVDPDAASVTVHVRAPLDLPLTVPGSPEVAVIGASGSAVVVPER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15119; Mature: 14988
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRDRTEAGQATLLIVGFAFVLAMGVALVVDASAAYLQRQGLDTVADGAALRGADLGAT CCCCCCCCCCCEEEHHHHHHHHHHHHHHHEECCHHHHHHHCCCCCHHCCCEECCCCCCCC GREVYTGGVPEARLELTAAAARASVHDYLVSSGAYASYPGLSFTVDVDPDAASVTVHVRA CCEEEECCCCCHHEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEC PLDLPLTVPGSPEVAVIGASGSAVVVPER CCCCEEECCCCCCEEEEECCCCEEEEECC >Mature Secondary Structure PRRDRTEAGQATLLIVGFAFVLAMGVALVVDASAAYLQRQGLDTVADGAALRGADLGAT CCCCCCCCCCEEEHHHHHHHHHHHHHHHEECCHHHHHHHCCCCCHHCCCEECCCCCCCC GREVYTGGVPEARLELTAAAARASVHDYLVSSGAYASYPGLSFTVDVDPDAASVTVHVRA CCEEEECCCCCHHEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEC PLDLPLTVPGSPEVAVIGASGSAVVVPER CCCCEEECCCCCCEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA