| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715474
Identifier: 119715474
GI number: 119715474
Start: 1314298
End: 1314819
Strand: Direct
Name: 119715474
Synonym: Noca_1238
Alternate gene names: NA
Gene position: 1314298-1314819 (Clockwise)
Preceding gene: 119715473
Following gene: 119715475
Centisome position: 26.36
GC content: 68.01
Gene sequence:
>522_bases ATGACCACCACGACAGCTGCCGCCACGGCCAGGAAGCTCATTCTTCCTGTGGGCAGCGTCGTCGGCGCCGGCTTGCTGGC CATGTTGATGGGGGTCCCCTGGACGAGTGCCGGCGAAGGAGCCTCCGGGATCCGGCTGCTGGCCGACGACCACCAGGGCG CGACCCTCACGATCAGCAGGATCGAGCCCGGTGAGTCTGTGTCTCGCAGCGTGACCATCCGCAACTCCGGTGGCACGCCG TCGAGGCTCTCCTTCCAGGAGACGGGAGACCCCTCGCCGTTCGCGGACGGGGAGCTGCGCCTGGTCATCGACCAGGACGG CCGAACCTTGTACGACGGCGACTTCGCCGCCATGAGCGACATCGCGCAGGACGTGGGCACCGTCGAGTCCCACGGGTCCA GCACGTTCACGTTCACGGTGTCCCTGCCGGACGACGCCCCGTTCGCCAATCAGGGCGACCCGGCGTCGGCGTCGTACACG TGGGTGAACTCGACCTCTGGATCGTCCGGATCCTTCGGCTGA
Upstream 100 bases:
>100_bases CTGTTACCGAACGGTGGATCTTCCGTGGAGATCGTGTTCATCGGGTGTGGACCGGGCCTGCCTACCTTGGCGGTGTAGCA CTGGAGCACCAGGGGATGAC
Downstream 100 bases:
>100_bases GGAGGGCCGACCGGCACTGATCGACCATCGGGGACGACGTCGGCCGCCCGCGCACCTGGGGGGCGCGCGGACGGTCGCCG TCCGACCCGGAACCTGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTTTTAAATARKLILPVGSVVGAGLLAMLMGVPWTSAGEGASGIRLLADDHQGATLTISRIEPGESVSRSVTIRNSGGTP SRLSFQETGDPSPFADGELRLVIDQDGRTLYDGDFAAMSDIAQDVGTVESHGSSTFTFTVSLPDDAPFANQGDPASASYT WVNSTSGSSGSFG
Sequences:
>Translated_173_residues MTTTTAAATARKLILPVGSVVGAGLLAMLMGVPWTSAGEGASGIRLLADDHQGATLTISRIEPGESVSRSVTIRNSGGTP SRLSFQETGDPSPFADGELRLVIDQDGRTLYDGDFAAMSDIAQDVGTVESHGSSTFTFTVSLPDDAPFANQGDPASASYT WVNSTSGSSGSFG >Mature_172_residues TTTTAAATARKLILPVGSVVGAGLLAMLMGVPWTSAGEGASGIRLLADDHQGATLTISRIEPGESVSRSVTIRNSGGTPS RLSFQETGDPSPFADGELRLVIDQDGRTLYDGDFAAMSDIAQDVGTVESHGSSTFTFTVSLPDDAPFANQGDPASASYTW VNSTSGSSGSFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17706; Mature: 17574
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTAAATARKLILPVGSVVGAGLLAMLMGVPWTSAGEGASGIRLLADDHQGATLTISR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEE IEPGESVSRSVTIRNSGGTPSRLSFQETGDPSPFADGELRLVIDQDGRTLYDGDFAAMSD CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHH IAQDVGTVESHGSSTFTFTVSLPDDAPFANQGDPASASYTWVNSTSGSSGSFG HHHHHCCHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure TTTTAAATARKLILPVGSVVGAGLLAMLMGVPWTSAGEGASGIRLLADDHQGATLTISR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEE IEPGESVSRSVTIRNSGGTPSRLSFQETGDPSPFADGELRLVIDQDGRTLYDGDFAAMSD CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHH IAQDVGTVESHGSSTFTFTVSLPDDAPFANQGDPASASYTWVNSTSGSSGSFG HHHHHCCHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA