| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715397
Identifier: 119715397
GI number: 119715397
Start: 1232806
End: 1233030
Strand: Reverse
Name: 119715397
Synonym: Noca_1160
Alternate gene names: NA
Gene position: 1233030-1232806 (Counterclockwise)
Preceding gene: 119715400
Following gene: 119715390
Centisome position: 24.73
GC content: 65.78
Gene sequence:
>225_bases ATGTCCACTGACCGCATCACGGTCGACCCGGCCAGGATGGCCGGCGCACCCACGATCCGTGACACTCGGGTCACGGTGAC GGCCGTGCTCGGGCAGCTTGCAGCGGGAAGCCCGGTCGAGCAGGTGCTCGCCGACTATCCGTATCTGGAACGAGAAGACG TCTTGGCTGCGCTGGCCTTCGCCACGGAGTCGATCCAACGCGACTTCCCGTTCGTTGCCGCATGA
Upstream 100 bases:
>100_bases AGCAGGACGACCTTGCCGCCCTCCTTCTCCCGGGCGGGCACGGTCGGCTGCTGATTCACGCGCGCCATCCTAGGAGGCGC CCGTCGCCTAGACTGTGAGC
Downstream 100 bases:
>100_bases AGCTGCTCGTCGACGCCAATCTCTCCCCCCGTCGTCGCTGAGCTTCTCCGCGCCGTGGTCTTCGACGCGACACACGTCGA AGACCACGGTCTCGCACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSTDRITVDPARMAGAPTIRDTRVTVTAVLGQLAAGSPVEQVLADYPYLEREDVLAALAFATESIQRDFPFVAA
Sequences:
>Translated_74_residues MSTDRITVDPARMAGAPTIRDTRVTVTAVLGQLAAGSPVEQVLADYPYLEREDVLAALAFATESIQRDFPFVAA >Mature_73_residues STDRITVDPARMAGAPTIRDTRVTVTAVLGQLAAGSPVEQVLADYPYLEREDVLAALAFATESIQRDFPFVAA
Specific function: Unknown
COG id: COG2442
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7938; Mature: 7807
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDRITVDPARMAGAPTIRDTRVTVTAVLGQLAAGSPVEQVLADYPYLEREDVLAALAF CCCCCEEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHH ATESIQRDFPFVAA HHHHHHHCCCCCCC >Mature Secondary Structure STDRITVDPARMAGAPTIRDTRVTVTAVLGQLAAGSPVEQVLADYPYLEREDVLAALAF CCCCEEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHH ATESIQRDFPFVAA HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA