| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cbdB [H]
Identifier: 119715072
GI number: 119715072
Start: 870239
End: 870829
Strand: Direct
Name: cbdB [H]
Synonym: Noca_0827
Alternate gene names: 119715072
Gene position: 870239-870829 (Clockwise)
Preceding gene: 119715071
Following gene: 119715073
Centisome position: 17.45
GC content: 68.19
Gene sequence:
>591_bases ATGAGCATCCCCGCCGAGTACACGGACACCTCCTCGTTCTCCTACCACGTCGACGCGGACTTCTATGCCGACCTCGACCG CTTCCGCGCGATGTTCGTCGAGGACTGGCCCGACGCCGACCCGGCCGACCTGACGGGCACGGCCTCCTTCCTCACCAGGG AGGCGCGGCTGATCGACGAGGGCCGGTTCAACGACTGGCTCGAGCTGTTCAGCGACGACTGCCTCTACTGGGTCCCGGTC ACCGCCGGCGGTGGTGACCCCCGCACGGAGGTCTCCCACGCGTTCGACGACCGTAGACGCCTGACCGACCGCGTCTACTG GCTGCGCACGGGCCTGGCCTACAGCCAGATCCCGGCCTCGCGGACCCGGCGGCTCGTCGGCAACGTCGAGGTGCTCGACG AGCCCTCGGGCGCGCGGCTCGTCCGGTCCAACTTCATCGTCAACGAGTTCCGTGCGGGCGTCACCAAGACCTATGCCGGC TGGTACGCCCACGTGCTCACCCCGGCCGCCGAGGGATGGCGGATCCGGATGAAGCAGGCCAACCTGCTCGACTCCGAGCA GTACCACGAGAACCTCACGATCGTCTTCTGA
Upstream 100 bases:
>100_bases ACGGGGTCGTCAAGACCGCGGTGACCGACGAACTGCACATGCGCAGCTACTACGTCGAATGGGTCAAGCGCATGGGCGGC GAGCAGAAGGTCGAGACGGC
Downstream 100 bases:
>100_bases GGCCGGCGAGGATGACACCGATCGACCGCCAGGACGACCCCGCGACGGCGGAGGAGACCCGAGCCTCGCAGGCACGCGAC GTCGGCGACGTGGCGGCTCT
Product: aromatic-ring-hydroxylating dioxygenase subunit beta
Products: NA
Alternate protein names: 2-chlorobenzoate 1,2-dioxygenase [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDEGRFNDWLELFSDDCLYWVPV TAGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPASRTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAG WYAHVLTPAAEGWRIRMKQANLLDSEQYHENLTIVF
Sequences:
>Translated_196_residues MSIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDEGRFNDWLELFSDDCLYWVPV TAGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPASRTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAG WYAHVLTPAAEGWRIRMKQANLLDSEQYHENLTIVF >Mature_195_residues SIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDEGRFNDWLELFSDDCLYWVPVT AGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPASRTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAGW YAHVLTPAAEGWRIRMKQANLLDSEQYHENLTIVF
Specific function: Component of 2-halobenzoate dioxygenase multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into 2-halobenzoate to form catechol [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017641 - InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.13 [H]
Molecular weight: Translated: 22503; Mature: 22372
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDE CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC GRFNDWLELFSDDCLYWVPVTAGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPAS CCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH RTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAGWYAHVLTPAAEGWRIRMKQA HHHHHHCCEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECC NLLDSEQYHENLTIVF CCCCCHHHHCCEEEEC >Mature Secondary Structure SIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDE CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC GRFNDWLELFSDDCLYWVPVTAGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPAS CCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH RTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAGWYAHVLTPAAEGWRIRMKQA HHHHHHCCEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECC NLLDSEQYHENLTIVF CCCCCHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7530709; 1370284 [H]