Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is cbdB [H]

Identifier: 119715072

GI number: 119715072

Start: 870239

End: 870829

Strand: Direct

Name: cbdB [H]

Synonym: Noca_0827

Alternate gene names: 119715072

Gene position: 870239-870829 (Clockwise)

Preceding gene: 119715071

Following gene: 119715073

Centisome position: 17.45

GC content: 68.19

Gene sequence:

>591_bases
ATGAGCATCCCCGCCGAGTACACGGACACCTCCTCGTTCTCCTACCACGTCGACGCGGACTTCTATGCCGACCTCGACCG
CTTCCGCGCGATGTTCGTCGAGGACTGGCCCGACGCCGACCCGGCCGACCTGACGGGCACGGCCTCCTTCCTCACCAGGG
AGGCGCGGCTGATCGACGAGGGCCGGTTCAACGACTGGCTCGAGCTGTTCAGCGACGACTGCCTCTACTGGGTCCCGGTC
ACCGCCGGCGGTGGTGACCCCCGCACGGAGGTCTCCCACGCGTTCGACGACCGTAGACGCCTGACCGACCGCGTCTACTG
GCTGCGCACGGGCCTGGCCTACAGCCAGATCCCGGCCTCGCGGACCCGGCGGCTCGTCGGCAACGTCGAGGTGCTCGACG
AGCCCTCGGGCGCGCGGCTCGTCCGGTCCAACTTCATCGTCAACGAGTTCCGTGCGGGCGTCACCAAGACCTATGCCGGC
TGGTACGCCCACGTGCTCACCCCGGCCGCCGAGGGATGGCGGATCCGGATGAAGCAGGCCAACCTGCTCGACTCCGAGCA
GTACCACGAGAACCTCACGATCGTCTTCTGA

Upstream 100 bases:

>100_bases
ACGGGGTCGTCAAGACCGCGGTGACCGACGAACTGCACATGCGCAGCTACTACGTCGAATGGGTCAAGCGCATGGGCGGC
GAGCAGAAGGTCGAGACGGC

Downstream 100 bases:

>100_bases
GGCCGGCGAGGATGACACCGATCGACCGCCAGGACGACCCCGCGACGGCGGAGGAGACCCGAGCCTCGCAGGCACGCGAC
GTCGGCGACGTGGCGGCTCT

Product: aromatic-ring-hydroxylating dioxygenase subunit beta

Products: NA

Alternate protein names: 2-chlorobenzoate 1,2-dioxygenase [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDEGRFNDWLELFSDDCLYWVPV
TAGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPASRTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAG
WYAHVLTPAAEGWRIRMKQANLLDSEQYHENLTIVF

Sequences:

>Translated_196_residues
MSIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDEGRFNDWLELFSDDCLYWVPV
TAGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPASRTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAG
WYAHVLTPAAEGWRIRMKQANLLDSEQYHENLTIVF
>Mature_195_residues
SIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDEGRFNDWLELFSDDCLYWVPVT
AGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPASRTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAGW
YAHVLTPAAEGWRIRMKQANLLDSEQYHENLTIVF

Specific function: Component of 2-halobenzoate dioxygenase multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into 2-halobenzoate to form catechol [H]

COG id: COG5517

COG function: function code Q; Small subunit of phenylpropionate dioxygenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017641
- InterPro:   IPR000391 [H]

Pfam domain/function: PF00866 Ring_hydroxyl_B [H]

EC number: =1.14.12.13 [H]

Molecular weight: Translated: 22503; Mature: 22372

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDE
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
GRFNDWLELFSDDCLYWVPVTAGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPAS
CCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH
RTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAGWYAHVLTPAAEGWRIRMKQA
HHHHHHCCEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECC
NLLDSEQYHENLTIVF
CCCCCHHHHCCEEEEC
>Mature Secondary Structure 
SIPAEYTDTSSFSYHVDADFYADLDRFRAMFVEDWPDADPADLTGTASFLTREARLIDE
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
GRFNDWLELFSDDCLYWVPVTAGGGDPRTEVSHAFDDRRRLTDRVYWLRTGLAYSQIPAS
CCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH
RTRRLVGNVEVLDEPSGARLVRSNFIVNEFRAGVTKTYAGWYAHVLTPAAEGWRIRMKQA
HHHHHHCCEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECC
NLLDSEQYHENLTIVF
CCCCCHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7530709; 1370284 [H]