| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715052
Identifier: 119715052
GI number: 119715052
Start: 848615
End: 849271
Strand: Direct
Name: 119715052
Synonym: Noca_0805
Alternate gene names: NA
Gene position: 848615-849271 (Clockwise)
Preceding gene: 119715051
Following gene: 119715053
Centisome position: 17.02
GC content: 66.82
Gene sequence:
>657_bases ATGAATGAGCTGATCCATCTGATGCGCACCACTGGGAGCCCCCGGTACTTCACCGACGAGGACGTGTCCGACGAGGTCAT TCTCCAGGCGATCGAAGCCGCGCGCTTCGCTCCGTCGGGCGGGAACAGGCAGCCGGTCCGGTGGATCGTCGTCCGCGACG GGCAGATCAGGCGCGCCCTCGCCGAGCTCTACCTACCCCTGTGGCAGCGGGACATGGCGGCGTTCCTCAGCGGCGAGATG CGCAGTGGAGCGGCGACGTTGGGCCCCGCGGTACGAGCCGCCAACGACTTCGCGGAGTCCTTCGGGAACGTCCCGGTGAT CCTGGTCGCTTGCGTCGTGGAGGCCGACCTGCACGTCCACATGAAGGACTCGGCGGGTCATCCCAACTTCCTTGGCGGCT CTTCGGTTTACACGTTCGTCCAGAACGCATGCCTCGCGCTCCGCTCGCTCGGCGTCGGTGCCACCATCACCACGCTGATC TGCGAACGCGAGGCCGAGGCAGCACAGCTGCTCGGCATTCCCGACGGGATGCGCTCTGCCTGCCACATCGCAGTGGGCTA CCCAGCAGGGGGTTTTCCGACCACCCTCACGCGCCTGGACGTCGAAGCGCTGGTCTCGTACGACCGGTACTCCGACGCCC CGCCACCTGACTTGTGA
Upstream 100 bases:
>100_bases GCCAGATCCTGGGGGACGCCCGGGGCCATCGGGCCCGGATCGCGCGGTTGATCGGCAGTGCCACACCGCCCGAGCTCGAT GCCCCACAGGAGGCCGGCGT
Downstream 100 bases:
>100_bases CCGATCTAACTCTGAGGGGTTGACGTACGTCACAGCGCGAGGCTAGATTCCACGCACCCTAACGAACGTTCGGTTCCCAC GAGATGAGGAAGATCACATG
Product: nitroreductase
Products: NA
Alternate protein names: Oxidoreductase; NADH Dehydrogenase; Nitroreductase Family Protein; Ribonuclease BN
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRALAELYLPLWQRDMAAFLSGEM RSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVHMKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLI CEREAEAAQLLGIPDGMRSACHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL
Sequences:
>Translated_218_residues MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRALAELYLPLWQRDMAAFLSGEM RSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVHMKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLI CEREAEAAQLLGIPDGMRSACHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL >Mature_218_residues MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRALAELYLPLWQRDMAAFLSGEM RSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVHMKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLI CEREAEAAQLLGIPDGMRSACHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23488; Mature: 23488
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRAL CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHH AELYLPLWQRDMAAFLSGEMRSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVH HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEE MKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLICEREAEAAQLLGIPDGMRSA EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCHHH CHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRAL CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHH AELYLPLWQRDMAAFLSGEMRSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVH HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEE MKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLICEREAEAAQLLGIPDGMRSA EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCHHH CHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA