| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is quiP [H]
Identifier: 119715035
GI number: 119715035
Start: 830485
End: 833103
Strand: Direct
Name: quiP [H]
Synonym: Noca_0788
Alternate gene names: 119715035
Gene position: 830485-833103 (Clockwise)
Preceding gene: 119715031
Following gene: 119715037
Centisome position: 16.66
GC content: 75.53
Gene sequence:
>2619_bases ATGCCTGCGACCACGGAGGACGACCGGCCGGACCGCGAGCGCCGGGGCTGGTGGCGCCGGTTCCGCGCGTGGCCGCGGCT CGCGCGGGCCCTGGTGTACGCCGCGGTCGCGCTCGTGCTGGTCCTCCTCGCCGGGCTGCTGACCGTGGTCCAGCTGGTGC GCGCGCCGTTCCCGCAGACCACCGGTGAGGTCGACCTGCCCGGGCTCGACGGGCCGGTCGAGGTGCTCCGGGACGACCAC GGCATCGCGCAGCTCTACGGCGACTCGGTCGAGGACCTGATGCGGGCGCAGGGCTACGTGCAGGCCCAGGAGCGCTTCTT CCAGATGGACGTACGCCGGCACCTCGCCGCCGGCCGGCTGGCCGAGCTGTTCGGTGCCGCCGCGCTCCCGAGCGACGAGT ACGCCCGTACCCTCGGCTGGCACCGGGTCGCGGAGCAGGAGCTGGCGCTCGTCCGGCCCGAGACGCGCGCGGCGCTGGAG GCATACGCGGACGGCGTGAACGCCTACCTCGAGCGCCACGCGCCCCGCGAGATCGCGGTCGAGTACACGGTCCTCAACGC GCGCGGTCTCGACTACCGGCCCGAGGACTGGACGCCGGTGGACTCGCTGGCCTGGCTCAAGGCGATGGCCTGGGACCTGG CCGGGAACCCGACCGAGGAGATCGACCGGGCGCTGGCGCTGGCGGGGCACACCGCGGACGAGGTCGCGGACCTGTACCCG CCCTACCCGCTCGACGAGCACGCCCCGATCGTGGGCCAGGGGGCCGTGGTCGACGGGGAGTTCGAGCAGGACGCCACCGG GCCCGGCACCCGCAACCCGCGGCGCCCGGCGTACCTCGCCGATGCCGCCGGCCGGACGGTGCTGACCGGCGTGCGCGACG GCCTCGCCCGGATGCCGGCCGCCCTCGGCGGCGGGGACGCGCTGGGCAGCAACGGCTGGGTGGTCTCCGGCGAGCACACG ACGACCGGCGGCCCGCTGCTGGCCGACGACCCGCACCTCGGCGCGTCCGTCCCGGGCCCGTGGCTGCAGCTGGGCCTGCA CTGCCGCACCGTCACCGACGAGTGCCCGCTGGACGTCGCCGGGTTCACGCTGGCCGGCGTCCCGGGGGTGGTCATCGGCC ACAACACCGACATCGCCTGGGGCTTCGCCAACCTCGGCGCCGACGTCAGCGACCTCTACCTCGAGCGGATCGAGGGGGAC CGGTGGCGCCACGACCGGCAGTGGCTGCCGCTGCGCAGCCGCACCGAGACGATCCGGGTGCGGGGCGAGGACGACGTCAC CCTCACCGTTCGCGCGACGGGTCACGGCCCGCTGCTCTCCGACGTCGACGACACCCTCGCCACGACCGGCCAGGACCCGC CCCGGGCGCGGGCCGGTGAGTACGCCGTCGCCCTGGCCTGGACCGGGCTGCACCCCACCACGACCGCCGACGCGATCCTC GCGCTCGACACCGCGACCGACTGGGACACCTTCCGGGCGGCAGCGTCGTCCTTCGAGGCGCCGGCGCAGAGCCTGCTGTA CGCCGACCGCGCGGGCCACATCGGCTACCAGGCGGCCGGCCGGATCCCGATCCGCCGGTCCGGCAACGACGGGACGCTCC CCAGCGCCGGCTGGAGGCCGGAGAACGACTGGACCGGCGAGCACGTCCCGTTCGACGGGCTGCCCCGGGTGCTCGACCCC GACGAGGGCTTCGTCGTGGCCGCCAACCAACAGGTCGCCGGCGGTGACTACCCCTACCGGCTCGGTGGCGACTGGGACCT CGGCTACCGCTCGCAGCGGATCCGGGACCGGCTGCAGCAGGAGGTCGACGCCGGTGCGGTGTCCGTGGCGAGCACGGCCC GGCTCCAGCTCGACGACCTGGACCCGCTCGCCCCGGTGCTCACGCCGTACCTCCACGACGTGACGCTGCCGCACGGCTAC TACGCGGCCGGCCAGCGGCTGCTGGGCAGCTGGGACTTCCGGCAGGGCGCCGACAGCGGCGCGGCGGCGTACTTCGACGC CGTATGGCGCGCGCTGCTCGCGGACCTGTTCCACGACGACCTGCCCGAGGCGATCCGGCCCGACGGCGGGGACCGGTGGG TCGCGGTCGTCACCGACCTGCTCACCCGCCCGGACGACCCCTGGTGGGACGACAAGCTCACCGAGGACGTCCAGGAGACC CGCGACGACATCTTGGAGCGGGCGCTGCGCGAGGCCCGCGACGAGCTCACCCGGCGGCTCGCACTCGATGCCGGCGAGTG GACCTGGCGCGACCTGCACCGGCTCGACCTGCGCGGCCCCGGGGCGGACCGGCCGTGGCCGCTGGCCGGGCTCGCCGACC GCACGGGCTGGCGGGTCGGCGGCGGGCCGGCCACCGTGAACGCCACTGCTTGGGACGCGGCGCAGGGGTACGGCGTCACC AGTGCCCCGTCGATGCGGATGGTGGTCTCCCTCGCCGACCTCGACGAGTCCCGCTGGATCGCTCTCACCGGGGTCTCCGG CCACCCGTACCACCCGCACTACACCGACCAGACCGACCTGTGGGCGGCGGACGAGACCCTGCCCTGGCTGTTCACCCGCG ACGCGGTCGCCGACGCCGGTGGCGACCGGCTCACGCTGACCCCGGCCGCCGACGGATAG
Upstream 100 bases:
>100_bases TCTCCTCCGGTGTGATCGTCGTCGGGGCCGTTGTCGGCTCGCGAGCCTGGCACTCGGCCCTGACGAGTGCCAATCATACG ACACGGCACAATGGCCGGAC
Downstream 100 bases:
>100_bases GTCGATGCCGCGGTCCCGCGACCCGACCGCCTCAACCCAGGCGGACGACCCCCGAGGGGGTCGCCGCGAACAGCACCGGA CGGTCGTGGGGCTCGACCGG
Product: penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 872; Mature: 871
Protein sequence:
>872_residues MPATTEDDRPDRERRGWWRRFRAWPRLARALVYAAVALVLVLLAGLLTVVQLVRAPFPQTTGEVDLPGLDGPVEVLRDDH GIAQLYGDSVEDLMRAQGYVQAQERFFQMDVRRHLAAGRLAELFGAAALPSDEYARTLGWHRVAEQELALVRPETRAALE AYADGVNAYLERHAPREIAVEYTVLNARGLDYRPEDWTPVDSLAWLKAMAWDLAGNPTEEIDRALALAGHTADEVADLYP PYPLDEHAPIVGQGAVVDGEFEQDATGPGTRNPRRPAYLADAAGRTVLTGVRDGLARMPAALGGGDALGSNGWVVSGEHT TTGGPLLADDPHLGASVPGPWLQLGLHCRTVTDECPLDVAGFTLAGVPGVVIGHNTDIAWGFANLGADVSDLYLERIEGD RWRHDRQWLPLRSRTETIRVRGEDDVTLTVRATGHGPLLSDVDDTLATTGQDPPRARAGEYAVALAWTGLHPTTTADAIL ALDTATDWDTFRAAASSFEAPAQSLLYADRAGHIGYQAAGRIPIRRSGNDGTLPSAGWRPENDWTGEHVPFDGLPRVLDP DEGFVVAANQQVAGGDYPYRLGGDWDLGYRSQRIRDRLQQEVDAGAVSVASTARLQLDDLDPLAPVLTPYLHDVTLPHGY YAAGQRLLGSWDFRQGADSGAAAYFDAVWRALLADLFHDDLPEAIRPDGGDRWVAVVTDLLTRPDDPWWDDKLTEDVQET RDDILERALREARDELTRRLALDAGEWTWRDLHRLDLRGPGADRPWPLAGLADRTGWRVGGGPATVNATAWDAAQGYGVT SAPSMRMVVSLADLDESRWIALTGVSGHPYHPHYTDQTDLWAADETLPWLFTRDAVADAGGDRLTLTPAADG
Sequences:
>Translated_872_residues MPATTEDDRPDRERRGWWRRFRAWPRLARALVYAAVALVLVLLAGLLTVVQLVRAPFPQTTGEVDLPGLDGPVEVLRDDH GIAQLYGDSVEDLMRAQGYVQAQERFFQMDVRRHLAAGRLAELFGAAALPSDEYARTLGWHRVAEQELALVRPETRAALE AYADGVNAYLERHAPREIAVEYTVLNARGLDYRPEDWTPVDSLAWLKAMAWDLAGNPTEEIDRALALAGHTADEVADLYP PYPLDEHAPIVGQGAVVDGEFEQDATGPGTRNPRRPAYLADAAGRTVLTGVRDGLARMPAALGGGDALGSNGWVVSGEHT TTGGPLLADDPHLGASVPGPWLQLGLHCRTVTDECPLDVAGFTLAGVPGVVIGHNTDIAWGFANLGADVSDLYLERIEGD RWRHDRQWLPLRSRTETIRVRGEDDVTLTVRATGHGPLLSDVDDTLATTGQDPPRARAGEYAVALAWTGLHPTTTADAIL ALDTATDWDTFRAAASSFEAPAQSLLYADRAGHIGYQAAGRIPIRRSGNDGTLPSAGWRPENDWTGEHVPFDGLPRVLDP DEGFVVAANQQVAGGDYPYRLGGDWDLGYRSQRIRDRLQQEVDAGAVSVASTARLQLDDLDPLAPVLTPYLHDVTLPHGY YAAGQRLLGSWDFRQGADSGAAAYFDAVWRALLADLFHDDLPEAIRPDGGDRWVAVVTDLLTRPDDPWWDDKLTEDVQET RDDILERALREARDELTRRLALDAGEWTWRDLHRLDLRGPGADRPWPLAGLADRTGWRVGGGPATVNATAWDAAQGYGVT SAPSMRMVVSLADLDESRWIALTGVSGHPYHPHYTDQTDLWAADETLPWLFTRDAVADAGGDRLTLTPAADG >Mature_871_residues PATTEDDRPDRERRGWWRRFRAWPRLARALVYAAVALVLVLLAGLLTVVQLVRAPFPQTTGEVDLPGLDGPVEVLRDDHG IAQLYGDSVEDLMRAQGYVQAQERFFQMDVRRHLAAGRLAELFGAAALPSDEYARTLGWHRVAEQELALVRPETRAALEA YADGVNAYLERHAPREIAVEYTVLNARGLDYRPEDWTPVDSLAWLKAMAWDLAGNPTEEIDRALALAGHTADEVADLYPP YPLDEHAPIVGQGAVVDGEFEQDATGPGTRNPRRPAYLADAAGRTVLTGVRDGLARMPAALGGGDALGSNGWVVSGEHTT TGGPLLADDPHLGASVPGPWLQLGLHCRTVTDECPLDVAGFTLAGVPGVVIGHNTDIAWGFANLGADVSDLYLERIEGDR WRHDRQWLPLRSRTETIRVRGEDDVTLTVRATGHGPLLSDVDDTLATTGQDPPRARAGEYAVALAWTGLHPTTTADAILA LDTATDWDTFRAAASSFEAPAQSLLYADRAGHIGYQAAGRIPIRRSGNDGTLPSAGWRPENDWTGEHVPFDGLPRVLDPD EGFVVAANQQVAGGDYPYRLGGDWDLGYRSQRIRDRLQQEVDAGAVSVASTARLQLDDLDPLAPVLTPYLHDVTLPHGYY AAGQRLLGSWDFRQGADSGAAAYFDAVWRALLADLFHDDLPEAIRPDGGDRWVAVVTDLLTRPDDPWWDDKLTEDVQETR DDILERALREARDELTRRLALDAGEWTWRDLHRLDLRGPGADRPWPLAGLADRTGWRVGGGPATVNATAWDAAQGYGVTS APSMRMVVSLADLDESRWIALTGVSGHPYHPHYTDQTDLWAADETLPWLFTRDAVADAGGDRLTLTPAADG
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 95176; Mature: 95044
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATTEDDRPDRERRGWWRRFRAWPRLARALVYAAVALVLVLLAGLLTVVQLVRAPFPQT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TGEVDLPGLDGPVEVLRDDHGIAQLYGDSVEDLMRAQGYVQAQERFFQMDVRRHLAAGRL CCCEECCCCCCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELFGAAALPSDEYARTLGWHRVAEQELALVRPETRAALEAYADGVNAYLERHAPREIAV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE EYTVLNARGLDYRPEDWTPVDSLAWLKAMAWDLAGNPTEEIDRALALAGHTADEVADLYP EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCC PYPLDEHAPIVGQGAVVDGEFEQDATGPGTRNPRRPAYLADAAGRTVLTGVRDGLARMPA CCCCCCCCCEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCH ALGGGDALGSNGWVVSGEHTTTGGPLLADDPHLGASVPGPWLQLGLHCRTVTDECPLDVA HCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCC GFTLAGVPGVVIGHNTDIAWGFANLGADVSDLYLERIEGDRWRHDRQWLPLRSRTETIRV CEEECCCCEEEEECCCCCEEEHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE RGEDDVTLTVRATGHGPLLSDVDDTLATTGQDPPRARAGEYAVALAWTGLHPTTTADAIL ECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEE ALDTATDWDTFRAAASSFEAPAQSLLYADRAGHIGYQAAGRIPIRRSGNDGTLPSAGWRP EEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC ENDWTGEHVPFDGLPRVLDPDEGFVVAANQQVAGGDYPYRLGGDWDLGYRSQRIRDRLQQ CCCCCCCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCEECCCCCCCCHHHHHHHHHHHH EVDAGAVSVASTARLQLDDLDPLAPVLTPYLHDVTLPHGYYAAGQRLLGSWDFRQGADSG HHCCCCEEEHHHCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC AAAYFDAVWRALLADLFHDDLPEAIRPDGGDRWVAVVTDLLTRPDDPWWDDKLTEDVQET HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RDDILERALREARDELTRRLALDAGEWTWRDLHRLDLRGPGADRPWPLAGLADRTGWRVG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEC GGPATVNATAWDAAQGYGVTSAPSMRMVVSLADLDESRWIALTGVSGHPYHPHYTDQTDL CCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC WAADETLPWLFTRDAVADAGGDRLTLTPAADG EECCCCCCEEEEHHHHHCCCCCEEEEECCCCC >Mature Secondary Structure PATTEDDRPDRERRGWWRRFRAWPRLARALVYAAVALVLVLLAGLLTVVQLVRAPFPQT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TGEVDLPGLDGPVEVLRDDHGIAQLYGDSVEDLMRAQGYVQAQERFFQMDVRRHLAAGRL CCCEECCCCCCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELFGAAALPSDEYARTLGWHRVAEQELALVRPETRAALEAYADGVNAYLERHAPREIAV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE EYTVLNARGLDYRPEDWTPVDSLAWLKAMAWDLAGNPTEEIDRALALAGHTADEVADLYP EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCC PYPLDEHAPIVGQGAVVDGEFEQDATGPGTRNPRRPAYLADAAGRTVLTGVRDGLARMPA CCCCCCCCCEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCH ALGGGDALGSNGWVVSGEHTTTGGPLLADDPHLGASVPGPWLQLGLHCRTVTDECPLDVA HCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCC GFTLAGVPGVVIGHNTDIAWGFANLGADVSDLYLERIEGDRWRHDRQWLPLRSRTETIRV CEEECCCCEEEEECCCCCEEEHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE RGEDDVTLTVRATGHGPLLSDVDDTLATTGQDPPRARAGEYAVALAWTGLHPTTTADAIL ECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEE ALDTATDWDTFRAAASSFEAPAQSLLYADRAGHIGYQAAGRIPIRRSGNDGTLPSAGWRP EEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC ENDWTGEHVPFDGLPRVLDPDEGFVVAANQQVAGGDYPYRLGGDWDLGYRSQRIRDRLQQ CCCCCCCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCEECCCCCCCCHHHHHHHHHHHH EVDAGAVSVASTARLQLDDLDPLAPVLTPYLHDVTLPHGYYAAGQRLLGSWDFRQGADSG HHCCCCEEEHHHCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC AAAYFDAVWRALLADLFHDDLPEAIRPDGGDRWVAVVTDLLTRPDDPWWDDKLTEDVQET HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RDDILERALREARDELTRRLALDAGEWTWRDLHRLDLRGPGADRPWPLAGLADRTGWRVG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEC GGPATVNATAWDAAQGYGVTSAPSMRMVVSLADLDESRWIALTGVSGHPYHPHYTDQTDL CCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC WAADETLPWLFTRDAVADAGGDRLTLTPAADG EECCCCCCEEEEHHHHHCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]